Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 7 - 104 | 1.7e-15 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 383 |
| AfaI | GTAC | 2 cut(s) | 13, 390 |
| AgsI | TTSAA | 2 cut(s) | 137, 157 |
| AluBI | AGCT | 2 cut(s) | 197, 305 |
| AluI | AGCT | 2 cut(s) | 197, 305 |
| Alw26I | GTCTC | 1 cut(s) | 345 |
| ApeKI | GCWGC | 2 cut(s) | 302, 347 |
| ApoI | RAATTY | 1 cut(s) | 383 |
| AsuHPI | GGTGA | 1 cut(s) | 35 |
| BaeGI | GKGCMC | 1 cut(s) | 184 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 279, 311 |
| BbvI | GCAGC | 2 cut(s) | 314, 334 |
| BccI | CCATC | 1 cut(s) | 300 |
| BcoDI | GTCTC | 1 cut(s) | 345 |
| BfaI | CTAG | 3 cut(s) | 267, 299, 326 |
| BisI | GCNGC | 2 cut(s) | 303, 348 |
| BlsI | GCNGC | 2 cut(s) | 304, 349 |
| BsaI | GGTCTC | 1 cut(s) | 345 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseSI | GKGCMC | 1 cut(s) | 184 |
| BseXI | GCAGC | 2 cut(s) | 314, 334 |
| BsgI | GTGCAG | 1 cut(s) | 300 |
| BsmAI | GTCTC | 1 cut(s) | 345 |
| Bso31I | GGTCTC | 1 cut(s) | 345 |
| Bsp1286I | GDGCHC | 1 cut(s) | 184 |
| Bsp143I | GATC | 2 cut(s) | 142, 322 |
| BspTNI | GGTCTC | 1 cut(s) | 345 |
| BssMI | GATC | 2 cut(s) | 142, 322 |
| Bst6I | CTCTTC | 1 cut(s) | 372 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 65, 308 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstKTI | GATC | 2 cut(s) | 145, 325 |
| BstMAI | GTCTC | 1 cut(s) | 345 |
| BstMBI | GATC | 2 cut(s) | 142, 322 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 65, 308 |
| BstNSI | RCATGY | 1 cut(s) | 68 |
| BstSLI | GKGCMC | 1 cut(s) | 184 |
| BstV1I | GCAGC | 2 cut(s) | 314, 334 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| Csp6I | GTAC | 2 cut(s) | 12, 389 |
| CviAII | CATG | 5 cut(s) | 65, 263, 308, 320, 344 |
| CviJI | RGCY | 6 cut(s) | 80, 197, 208, 278, 290, 305 |
| CviKI_1 | RGCY | 6 cut(s) | 80, 197, 208, 278, 290, 305 |
| CviQI | GTAC | 2 cut(s) | 12, 389 |
| DpnI | GATC | 2 cut(s) | 144, 324 |
| DpnII | GATC | 2 cut(s) | 142, 322 |
| Eam1104I | CTCTTC | 1 cut(s) | 372 |
| EarI | CTCTTC | 1 cut(s) | 372 |
| Eco31I | GGTCTC | 1 cut(s) | 345 |
| FaeI | CATG | 5 cut(s) | 68, 266, 311, 323, 347 |
| FatI | CATG | 5 cut(s) | 64, 262, 307, 319, 343 |
| Fnu4HI | GCNGC | 2 cut(s) | 303, 348 |
| FokI | GGATG | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 2 cut(s) | 303, 348 |
| FspBI | CTAG | 3 cut(s) | 267, 299, 326 |
| GluI | GCNGC | 2 cut(s) | 303, 348 |
| Hin1II | CATG | 5 cut(s) | 68, 266, 311, 323, 347 |
| HphI | GGTGA | 1 cut(s) | 35 |
| Hpy188III | TCNNGA | 1 cut(s) | 326 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 317 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 65, 308 |
| Hsp92II | CATG | 5 cut(s) | 68, 266, 311, 323, 347 |
| Kzo9I | GATC | 2 cut(s) | 142, 322 |
| LpnPI | CCDG | 1 cut(s) | 138 |
| Lsp1109I | GCAGC | 2 cut(s) | 314, 334 |
| MaeI | CTAG | 3 cut(s) | 267, 299, 326 |
| MalI | GATC | 2 cut(s) | 144, 324 |
| MboI | GATC | 2 cut(s) | 142, 322 |
| MboII | GAAGA | 3 cut(s) | 239, 287, 389 |
| MfeI | CAATTG | 1 cut(s) | 164 |
| MhlI | GDGCHC | 1 cut(s) | 184 |
| MluCI | AATT | 2 cut(s) | 164, 383 |
| MnlI | CCTC | 2 cut(s) | 82, 264 |
| MseI | TTAA | 1 cut(s) | 394 |
| MunI | CAATTG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 65, 308 |
| NdeII | GATC | 2 cut(s) | 142, 322 |
| NlaIII | CATG | 5 cut(s) | 68, 266, 311, 323, 347 |
| NspI | RCATGY | 1 cut(s) | 68 |
| PkrI | GCNGC | 2 cut(s) | 304, 349 |
| RsaI | GTAC | 2 cut(s) | 13, 390 |
| RsaNI | GTAC | 2 cut(s) | 12, 389 |
| SaqAI | TTAA | 1 cut(s) | 394 |
| SatI | GCNGC | 2 cut(s) | 303, 348 |
| Sau3AI | GATC | 2 cut(s) | 142, 322 |
| SduI | GDGCHC | 1 cut(s) | 184 |
| SetI | ASST | 4 cut(s) | 199, 288, 307, 394 |
| Sse9I | AATT | 2 cut(s) | 164, 383 |
| SspMI | CTAG | 3 cut(s) | 267, 299, 326 |
| TasI | AATT | 2 cut(s) | 164, 383 |
| Tru1I | TTAA | 1 cut(s) | 394 |
| Tru9I | TTAA | 1 cut(s) | 394 |
| TseI | GCWGC | 2 cut(s) | 302, 347 |
| TspDTI | ATGAA | 2 cut(s) | 251, 390 |
| XapI | RAATTY | 1 cut(s) | 383 |
| XbaI | TCTAGA | 1 cut(s) | 325 |
| XceI | RCATGY | 1 cut(s) | 68 |
| XspI | CTAG | 3 cut(s) | 267, 299, 326 |