Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 299 |
| AciI | CCGC | 1 cut(s) | 337 |
| AclWI | GGATC | 2 cut(s) | 24, 408 |
| AcsI | RAATTY | 2 cut(s) | 306, 498 |
| AcuI | CTGAAG | 1 cut(s) | 570 |
| AcyI | GRCGYC | 1 cut(s) | 673 |
| AfaI | GTAC | 2 cut(s) | 209, 357 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 509, 652 |
| AgsI | TTSAA | 2 cut(s) | 51, 346 |
| AluBI | AGCT | 2 cut(s) | 548, 682 |
| AluI | AGCT | 2 cut(s) | 548, 682 |
| Alw26I | GTCTC | 1 cut(s) | 472 |
| AlwI | GGATC | 2 cut(s) | 24, 408 |
| ApeKI | GCWGC | 2 cut(s) | 215, 608 |
| ApoI | RAATTY | 2 cut(s) | 306, 498 |
| AseI | ATTAAT | 1 cut(s) | 525 |
| AspLEI | GCGC | 1 cut(s) | 613 |
| AspS9I | GGNCC | 1 cut(s) | 643 |
| AsuC2I | CCSGG | 1 cut(s) | 236 |
| AsuHPI | GGTGA | 4 cut(s) | 107, 331, 395, 470 |
| AvaII | GGWCC | 1 cut(s) | 643 |
| BanI | GGYRCC | 1 cut(s) | 299 |
| BbsI | GAAGAC | 1 cut(s) | 459 |
| BbvI | GCAGC | 2 cut(s) | 202, 595 |
| BccI | CCATC | 3 cut(s) | 103, 454, 527 |
| BcnI | CCSGG | 1 cut(s) | 236 |
| BcoDI | GTCTC | 1 cut(s) | 472 |
| BfaI | CTAG | 3 cut(s) | 20, 507, 677 |
| BfmI | CTRYAG | 1 cut(s) | 63 |
| BisI | GCNGC | 2 cut(s) | 216, 609 |
| BlpI | GCTNAGC | 1 cut(s) | 618 |
| BlsI | GCNGC | 2 cut(s) | 217, 610 |
| Bme1390I | CCNGG | 1 cut(s) | 236 |
| Bme18I | GGWCC | 1 cut(s) | 643 |
| BmgT120I | GGNCC | 1 cut(s) | 643 |
| BmiI | GGNNCC | 1 cut(s) | 301 |
| BmrFI | CCNGG | 1 cut(s) | 236 |
| BmsI | GCATC | 1 cut(s) | 248 |
| BpiI | GAAGAC | 1 cut(s) | 459 |
| BpmI | CTGGAG | 1 cut(s) | 282 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 618 |
| BpuMI | CCSGG | 1 cut(s) | 236 |
| BsaHI | GRCGYC | 1 cut(s) | 673 |
| BsaI | GGTCTC | 1 cut(s) | 472 |
| BsaJI | CCNNGG | 1 cut(s) | 315 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 550, 564, 580, 594 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 509, 652 |
| Bse1I | ACTGG | 1 cut(s) | 598 |
| Bse3DI | GCAATG | 3 cut(s) | 199, 225, 406 |
| BseDI | CCNNGG | 1 cut(s) | 315 |
| BseGI | GGATG | 4 cut(s) | 114, 143, 446, 538 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 509, 652 |
| BseMI | GCAATG | 3 cut(s) | 199, 225, 406 |
| BseMII | CTCAG | 2 cut(s) | 139, 497 |
| BseNI | ACTGG | 1 cut(s) | 598 |
| BseXI | GCAGC | 2 cut(s) | 202, 595 |
| BshNI | GGYRCC | 1 cut(s) | 299 |
| BsiSI | CCGG | 1 cut(s) | 235 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 509, 652 |
| BsmAI | GTCTC | 1 cut(s) | 472 |
| BsmI | GAATGC | 1 cut(s) | 129 |
| Bso31I | GGTCTC | 1 cut(s) | 472 |
| Bsp1407I | TGTACA | 1 cut(s) | 207 |
| Bsp143I | GATC | 3 cut(s) | 16, 145, 400 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 618 |
| BspACI | CCGC | 1 cut(s) | 337 |
| BspCNI | CTCAG | 2 cut(s) | 138, 496 |
| BspLI | GGNNCC | 1 cut(s) | 301 |
| BspPI | GGATC | 2 cut(s) | 24, 408 |
| BspT107I | GGYRCC | 1 cut(s) | 299 |
| BspTNI | GGTCTC | 1 cut(s) | 472 |
| BsrDI | GCAATG | 3 cut(s) | 199, 225, 406 |
| BsrGI | TGTACA | 1 cut(s) | 207 |
| BsrI | ACTGG | 1 cut(s) | 598 |
| BssECI | CCNNGG | 1 cut(s) | 315 |
| BssMI | GATC | 3 cut(s) | 16, 145, 400 |
| BssNI | GRCGYC | 1 cut(s) | 673 |
| BssT1I | CCWWGG | 1 cut(s) | 315 |
| Bst4CI | ACNGT | 1 cut(s) | 458 |
| BstACI | GRCGYC | 1 cut(s) | 673 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 417 |
| BstAUI | TGTACA | 1 cut(s) | 207 |
| BstC8I | GCNNGC | 1 cut(s) | 615 |
| BstDEI | CTNAG | 4 cut(s) | 125, 483, 618, 705 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 650 |
| BstF5I | GGATG | 4 cut(s) | 114, 143, 446, 538 |
| BstHHI | GCGC | 1 cut(s) | 613 |
| BstKTI | GATC | 3 cut(s) | 19, 148, 403 |
| BstMAI | GTCTC | 1 cut(s) | 472 |
| BstMBI | GATC | 3 cut(s) | 16, 145, 400 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 417, 545, 614, 619, 679 |
| BstNSI | RCATGY | 3 cut(s) | 181, 415, 635 |
| BstSCI | CCNGG | 1 cut(s) | 234 |
| BstSFI | CTRYAG | 1 cut(s) | 63 |
| BstV1I | GCAGC | 2 cut(s) | 202, 595 |
| BstV2I | GAAGAC | 1 cut(s) | 459 |
| BstX2I | RGATCY | 1 cut(s) | 16 |
| BstYI | RGATCY | 1 cut(s) | 16 |
| BtsCI | GGATG | 4 cut(s) | 114, 143, 446, 538 |
| BtsI | GCAGTG | 1 cut(s) | 273 |
| BtsIMutI | CAGTG | 1 cut(s) | 273 |
| Cac8I | GCNNGC | 1 cut(s) | 615 |
| CfoI | GCGC | 1 cut(s) | 613 |
| Cfr13I | GGNCC | 1 cut(s) | 643 |
| CseI | GACGC | 1 cut(s) | 662 |
| Csp6I | GTAC | 2 cut(s) | 208, 356 |
| CviAII | CATG | 5 cut(s) | 178, 203, 412, 421, 632 |
| CviJI | RGCY | 9 cut(s) | 62, 113, 260, 539, 548, 617, 622, 682, 710 |
| CviKI_1 | RGCY | 9 cut(s) | 62, 113, 260, 539, 548, 617, 622, 682, 710 |
| CviQI | GTAC | 2 cut(s) | 208, 356 |
| DdeI | CTNAG | 4 cut(s) | 125, 483, 618, 705 |
| DpnI | GATC | 3 cut(s) | 18, 147, 402 |
| DpnII | GATC | 3 cut(s) | 16, 145, 400 |
| Eco130I | CCWWGG | 1 cut(s) | 315 |
| Eco31I | GGTCTC | 1 cut(s) | 472 |
| Eco47I | GGWCC | 1 cut(s) | 643 |
| Eco57I | CTGAAG | 1 cut(s) | 570 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 650 |
| EcoRI | GAATTC | 1 cut(s) | 306 |
| EcoT14I | CCWWGG | 1 cut(s) | 315 |
| ErhI | CCWWGG | 1 cut(s) | 315 |
| FaeI | CATG | 5 cut(s) | 181, 206, 415, 424, 635 |
| FatI | CATG | 5 cut(s) | 177, 202, 411, 420, 631 |
| Fnu4HI | GCNGC | 2 cut(s) | 216, 609 |
| FokI | GGATG | 4 cut(s) | 121, 150, 433, 545 |
| Fsp4HI | GCNGC | 2 cut(s) | 216, 609 |
| FspBI | CTAG | 3 cut(s) | 20, 507, 677 |
| GlaI | GCGC | 1 cut(s) | 612 |
| GluI | GCNGC | 2 cut(s) | 216, 609 |
| GsuI | CTGGAG | 1 cut(s) | 282 |
| HapII | CCGG | 1 cut(s) | 235 |
| HgaI | GACGC | 1 cut(s) | 662 |
| HhaI | GCGC | 1 cut(s) | 613 |
| Hin1I | GRCGYC | 1 cut(s) | 673 |
| Hin1II | CATG | 5 cut(s) | 181, 206, 415, 424, 635 |
| Hin6I | GCGC | 1 cut(s) | 611 |
| HinP1I | GCGC | 1 cut(s) | 611 |
| HinfI | GANTC | 3 cut(s) | 47, 223, 271 |
| HpaII | CCGG | 1 cut(s) | 235 |
| HphI | GGTGA | 4 cut(s) | 107, 331, 395, 470 |
| Hpy166II | GTNNAC | 2 cut(s) | 208, 688 |
| Hpy188I | TCNGA | 4 cut(s) | 253, 451, 486, 519 |
| Hpy188III | TCNNGA | 1 cut(s) | 677 |
| Hpy8I | GTNNAC | 2 cut(s) | 208, 688 |
| HpyAV | CCTTC | 2 cut(s) | 458, 545 |
| HpyCH4III | ACNGT | 1 cut(s) | 458 |
| HpyCH4IV | ACGT | 1 cut(s) | 382 |
| HpyCH4V | TGCA | 5 cut(s) | 192, 218, 411, 420, 635 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 417, 545, 614, 619, 679 |
| HpyF3I | CTNAG | 4 cut(s) | 125, 483, 618, 705 |
| HpySE526I | ACGT | 1 cut(s) | 382 |
| Hsp92I | GRCGYC | 1 cut(s) | 673 |
| Hsp92II | CATG | 5 cut(s) | 181, 206, 415, 424, 635 |
| HspAI | GCGC | 1 cut(s) | 611 |
| Kzo9I | GATC | 3 cut(s) | 16, 145, 400 |
| LmnI | GCTCC | 1 cut(s) | 263 |
| LpnPI | CCDG | 7 cut(s) | 246, 248, 316, 579, 599, 668, 696 |
| Lsp1109I | GCAGC | 2 cut(s) | 202, 595 |
| LweI | GCATC | 1 cut(s) | 248 |
| MaeI | CTAG | 3 cut(s) | 20, 507, 677 |
| MaeII | ACGT | 1 cut(s) | 382 |
| MaeIII | GTNAC | 2 cut(s) | 224, 272 |
| MalI | GATC | 3 cut(s) | 18, 147, 402 |
| MboI | GATC | 3 cut(s) | 16, 145, 400 |
| MboII | GAAGA | 3 cut(s) | 240, 358, 464 |
| MflI | RGATCY | 1 cut(s) | 16 |
| MluCI | AATT | 7 cut(s) | 31, 80, 306, 391, 428, 498, 522 |
| MlyI | GAGTC | 2 cut(s) | 232, 280 |
| MseI | TTAA | 3 cut(s) | 390, 525, 648 |
| MspI | CCGG | 1 cut(s) | 235 |
| MspR9I | CCNGG | 1 cut(s) | 236 |
| Mva1269I | GAATGC | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 417, 545, 614, 619, 679 |
| NciI | CCSGG | 1 cut(s) | 236 |
| NdeII | GATC | 3 cut(s) | 16, 145, 400 |
| NlaIII | CATG | 5 cut(s) | 181, 206, 415, 424, 635 |
| NlaIV | GGNNCC | 1 cut(s) | 301 |
| NmuCI | GTSAC | 2 cut(s) | 224, 272 |
| NspI | RCATGY | 3 cut(s) | 181, 415, 635 |
| PctI | GAATGC | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| PkrI | GCNGC | 2 cut(s) | 217, 610 |
| PleI | GAGTC | 2 cut(s) | 231, 279 |
| PpsI | GAGTC | 2 cut(s) | 231, 279 |
| PshBI | ATTAAT | 1 cut(s) | 525 |
| PspN4I | GGNNCC | 1 cut(s) | 301 |
| PspPI | GGNCC | 1 cut(s) | 643 |
| PsuI | RGATCY | 1 cut(s) | 16 |
| RsaI | GTAC | 2 cut(s) | 209, 357 |
| RsaNI | GTAC | 2 cut(s) | 208, 356 |
| SaqAI | TTAA | 3 cut(s) | 390, 525, 648 |
| SatI | GCNGC | 2 cut(s) | 216, 609 |
| Sau3AI | GATC | 3 cut(s) | 16, 145, 400 |
| Sau96I | GGNCC | 1 cut(s) | 643 |
| SchI | GAGTC | 2 cut(s) | 232, 280 |
| ScrFI | CCNGG | 1 cut(s) | 236 |
| SetI | ASST | 9 cut(s) | 321, 361, 372, 385, 484, 550, 556, 568, 684 |
| SfaNI | GCATC | 1 cut(s) | 248 |
| SfcI | CTRYAG | 1 cut(s) | 63 |
| SinI | GGWCC | 1 cut(s) | 643 |
| Sse9I | AATT | 7 cut(s) | 31, 80, 306, 391, 428, 498, 522 |
| SsiI | CCGC | 1 cut(s) | 337 |
| SspI | AATATT | 1 cut(s) | 281 |
| SspMI | CTAG | 3 cut(s) | 20, 507, 677 |
| StyD4I | CCNGG | 1 cut(s) | 234 |
| StyI | CCWWGG | 1 cut(s) | 315 |
| TaaI | ACNGT | 1 cut(s) | 458 |
| TaiI | ACGT | 1 cut(s) | 385 |
| TaqI | TCGA | 1 cut(s) | 544 |
| TaqII | GACCGA | 1 cut(s) | 631 |
| TasI | AATT | 7 cut(s) | 31, 80, 306, 391, 428, 498, 522 |
| TatI | WGTACW | 1 cut(s) | 207 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| Tru1I | TTAA | 3 cut(s) | 390, 525, 648 |
| Tru9I | TTAA | 3 cut(s) | 390, 525, 648 |
| TscAI | CASTG | 1 cut(s) | 273 |
| TseFI | GTSAC | 2 cut(s) | 224, 272 |
| TseI | GCWGC | 2 cut(s) | 215, 608 |
| Tsp45I | GTSAC | 2 cut(s) | 224, 272 |
| TspDTI | ATGAA | 2 cut(s) | 89, 603 |
| TspRI | CASTG | 1 cut(s) | 273 |
| VpaK11BI | GGWCC | 1 cut(s) | 643 |
| VspI | ATTAAT | 1 cut(s) | 525 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 650 |
| XapI | RAATTY | 2 cut(s) | 306, 498 |
| XbaI | TCTAGA | 1 cut(s) | 676 |
| XceI | RCATGY | 3 cut(s) | 181, 415, 635 |
| XspI | CTAG | 3 cut(s) | 20, 507, 677 |