Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 269 |
| AcsI | RAATTY | 1 cut(s) | 154 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 55, 218 |
| AgsI | TTSAA | 2 cut(s) | 8, 32 |
| AjiI | CACGTC | 1 cut(s) | 309 |
| AluBI | AGCT | 1 cut(s) | 28 |
| AluI | AGCT | 1 cut(s) | 28 |
| Aor13HI | TCCGGA | 1 cut(s) | 269 |
| AoxI | GGCC | 1 cut(s) | 45 |
| ApoI | RAATTY | 1 cut(s) | 154 |
| AseI | ATTAAT | 1 cut(s) | 234 |
| AspS9I | GGNCC | 2 cut(s) | 46, 334 |
| AvaII | GGWCC | 1 cut(s) | 334 |
| BccI | CCATC | 4 cut(s) | 11, 37, 58, 236 |
| Bme18I | GGWCC | 1 cut(s) | 334 |
| BmgBI | CACGTC | 1 cut(s) | 309 |
| BmgT120I | GGNCC | 2 cut(s) | 46, 334 |
| BmiI | GGNNCC | 1 cut(s) | 268 |
| BsaJI | CCNNGG | 1 cut(s) | 215 |
| BsaWI | WCCGGW | 1 cut(s) | 269 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 238, 268 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 55, 218 |
| BseAI | TCCGGA | 1 cut(s) | 269 |
| BseDI | CCNNGG | 1 cut(s) | 215 |
| BseGI | GGATG | 1 cut(s) | 69 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 55, 218 |
| BshFI | GGCC | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 270 |
| BslFI | GGGAC | 1 cut(s) | 319 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 55, 218 |
| BsmFI | GGGAC | 1 cut(s) | 319 |
| BsnI | GGCC | 1 cut(s) | 47 |
| Bsp13I | TCCGGA | 1 cut(s) | 269 |
| BspANI | GGCC | 1 cut(s) | 47 |
| BspEI | TCCGGA | 1 cut(s) | 269 |
| BspLI | GGNNCC | 1 cut(s) | 268 |
| BssECI | CCNNGG | 1 cut(s) | 215 |
| Bst4CI | ACNGT | 2 cut(s) | 334, 348 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 350 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstDSI | CCRYGG | 1 cut(s) | 215 |
| BstF5I | GGATG | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 323, 350 |
| BstNSI | RCATGY | 2 cut(s) | 118, 122 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 201 |
| BsuRI | GGCC | 1 cut(s) | 47 |
| BtgI | CCRYGG | 1 cut(s) | 215 |
| BtrI | CACGTC | 1 cut(s) | 309 |
| BtsCI | GGATG | 1 cut(s) | 69 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 2 cut(s) | 46, 334 |
| CviAII | CATG | 5 cut(s) | 79, 115, 119, 123, 313 |
| CviJI | RGCY | 5 cut(s) | 28, 47, 128, 226, 267 |
| CviKI_1 | RGCY | 5 cut(s) | 28, 47, 128, 226, 267 |
| Eco47I | GGWCC | 1 cut(s) | 334 |
| EcoT22I | ATGCAT | 2 cut(s) | 120, 124 |
| FaeI | CATG | 5 cut(s) | 82, 118, 122, 126, 316 |
| FaqI | GGGAC | 1 cut(s) | 319 |
| FatI | CATG | 5 cut(s) | 78, 114, 118, 122, 312 |
| FauNDI | CATATG | 1 cut(s) | 360 |
| FokI | GGATG | 1 cut(s) | 76 |
| HaeIII | GGCC | 1 cut(s) | 47 |
| HapII | CCGG | 1 cut(s) | 270 |
| Hin1II | CATG | 5 cut(s) | 82, 118, 122, 126, 316 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HinfI | GANTC | 2 cut(s) | 190, 205 |
| HpaII | CCGG | 1 cut(s) | 270 |
| Hpy166II | GTNNAC | 2 cut(s) | 204, 212 |
| Hpy188III | TCNNGA | 3 cut(s) | 40, 85, 270 |
| Hpy8I | GTNNAC | 2 cut(s) | 204, 212 |
| HpyAV | CCTTC | 3 cut(s) | 82, 172, 216 |
| HpyCH4III | ACNGT | 2 cut(s) | 334, 348 |
| HpyCH4IV | ACGT | 2 cut(s) | 166, 308 |
| HpyCH4V | TGCA | 6 cut(s) | 118, 122, 302, 312, 344, 353 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 323, 350 |
| HpySE526I | ACGT | 2 cut(s) | 166, 308 |
| Hsp92II | CATG | 5 cut(s) | 82, 118, 122, 126, 316 |
| Kpn2I | TCCGGA | 1 cut(s) | 269 |
| LmnI | GCTCC | 1 cut(s) | 272 |
| LpnPI | CCDG | 4 cut(s) | 70, 249, 283, 288 |
| MaeII | ACGT | 2 cut(s) | 166, 308 |
| MluCI | AATT | 4 cut(s) | 154, 231, 295, 354 |
| MlyI | GAGTC | 2 cut(s) | 184, 199 |
| MnlI | CCTC | 2 cut(s) | 180, 266 |
| Mph1103I | ATGCAT | 2 cut(s) | 120, 124 |
| MroI | TCCGGA | 1 cut(s) | 269 |
| MseI | TTAA | 3 cut(s) | 102, 111, 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MspI | CCGG | 1 cut(s) | 270 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 323, 350 |
| NdeI | CATATG | 1 cut(s) | 360 |
| NlaIII | CATG | 5 cut(s) | 82, 118, 122, 126, 316 |
| NlaIV | GGNNCC | 1 cut(s) | 268 |
| NsiI | ATGCAT | 2 cut(s) | 120, 124 |
| NspI | RCATGY | 2 cut(s) | 118, 122 |
| PaeI | GCATGC | 1 cut(s) | 122 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 314 |
| PleI | GAGTC | 2 cut(s) | 184, 199 |
| PpsI | GAGTC | 2 cut(s) | 184, 199 |
| PshBI | ATTAAT | 1 cut(s) | 234 |
| PspN4I | GGNNCC | 1 cut(s) | 268 |
| PspPI | GGNCC | 2 cut(s) | 46, 334 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SaqAI | TTAA | 3 cut(s) | 102, 111, 234 |
| Sau96I | GGNCC | 2 cut(s) | 46, 334 |
| SchI | GAGTC | 2 cut(s) | 184, 199 |
| SetI | ASST | 5 cut(s) | 30, 169, 277, 311, 323 |
| SinI | GGWCC | 1 cut(s) | 334 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| SphI | GCATGC | 1 cut(s) | 122 |
| Sse9I | AATT | 4 cut(s) | 154, 231, 295, 354 |
| SspI | AATATT | 1 cut(s) | 35 |
| TaaI | ACNGT | 2 cut(s) | 334, 348 |
| TaiI | ACGT | 2 cut(s) | 169, 311 |
| TaqI | TCGA | 1 cut(s) | 328 |
| TasI | AATT | 4 cut(s) | 154, 231, 295, 354 |
| Tru1I | TTAA | 3 cut(s) | 102, 111, 234 |
| Tru9I | TTAA | 3 cut(s) | 102, 111, 234 |
| TspDTI | ATGAA | 2 cut(s) | 123, 347 |
| VpaK11BI | GGWCC | 1 cut(s) | 334 |
| VspI | ATTAAT | 1 cut(s) | 234 |
| XapI | RAATTY | 1 cut(s) | 154 |
| XceI | RCATGY | 2 cut(s) | 118, 122 |
| Zsp2I | ATGCAT | 2 cut(s) | 120, 124 |