ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 155 |
| Acc36I | ACCTGC | 1 cut(s) | 155 |
| AciI | CCGC | 1 cut(s) | 46 |
| AfaI | GTAC | 1 cut(s) | 247 |
| AgsI | TTSAA | 1 cut(s) | 71 |
| AluBI | AGCT | 5 cut(s) | 26, 95, 197, 233, 285 |
| AluI | AGCT | 5 cut(s) | 26, 95, 197, 233, 285 |
| Ama87I | CYCGRG | 1 cut(s) | 99 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| AspLEI | GCGC | 2 cut(s) | 16, 223 |
| AsuC2I | CCSGG | 1 cut(s) | 20 |
| AsuHPI | GGTGA | 2 cut(s) | 125, 179 |
| AsuNHI | GCTAGC | 2 cut(s) | 229, 281 |
| AvaI | CYCGRG | 1 cut(s) | 99 |
| BbsI | GAAGAC | 1 cut(s) | 153 |
| BbvI | GCAGC | 1 cut(s) | 82 |
| BccI | CCATC | 1 cut(s) | 104 |
| BcnI | CCSGG | 1 cut(s) | 20 |
| BfaI | CTAG | 3 cut(s) | 230, 243, 282 |
| BfoI | RGCGCY | 1 cut(s) | 17 |
| BfuAI | ACCTGC | 1 cut(s) | 155 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 1 cut(s) | 20 |
| BmeT110I | CYCGRG | 1 cut(s) | 99 |
| BmrFI | CCNGG | 1 cut(s) | 20 |
| BmtI | GCTAGC | 2 cut(s) | 233, 285 |
| BpiI | GAAGAC | 1 cut(s) | 153 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 269, 301 |
| BpuMI | CCSGG | 1 cut(s) | 20 |
| BsaJI | CCNNGG | 1 cut(s) | 126 |
| Bse1I | ACTGG | 1 cut(s) | 144 |
| BseDI | CCNNGG | 1 cut(s) | 126 |
| BseNI | ACTGG | 1 cut(s) | 144 |
| BseXI | GCAGC | 1 cut(s) | 82 |
| BsiHKCI | CYCGRG | 1 cut(s) | 99 |
| BsiSI | CCGG | 1 cut(s) | 19 |
| BsoBI | CYCGRG | 1 cut(s) | 99 |
| BspACI | CCGC | 1 cut(s) | 46 |
| BspMI | ACCTGC | 1 cut(s) | 155 |
| BspOI | GCTAGC | 2 cut(s) | 233, 285 |
| BsrI | ACTGG | 1 cut(s) | 144 |
| BssECI | CCNNGG | 1 cut(s) | 126 |
| Bst4CI | ACNGT | 1 cut(s) | 203 |
| BstC8I | GCNNGC | 2 cut(s) | 231, 283 |
| BstDEI | CTNAG | 1 cut(s) | 91 |
| BstH2I | RGCGCY | 1 cut(s) | 17 |
| BstHHI | GCGC | 2 cut(s) | 16, 223 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 239 |
| BstSCI | CCNGG | 1 cut(s) | 18 |
| BstV1I | GCAGC | 1 cut(s) | 82 |
| BstV2I | GAAGAC | 1 cut(s) | 153 |
| BveI | ACCTGC | 1 cut(s) | 155 |
| Cac8I | GCNNGC | 2 cut(s) | 231, 283 |
| CfoI | GCGC | 2 cut(s) | 16, 223 |
| Csp6I | GTAC | 1 cut(s) | 246 |
| CviAII | CATG | 1 cut(s) | 288 |
| CviJI | RGCY | 8 cut(s) | 26, 95, 158, 197, 229, 233, 281, 285 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 95, 158, 197, 229, 233, 281, 285 |
| CviQI | GTAC | 1 cut(s) | 246 |
| DdeI | CTNAG | 1 cut(s) | 91 |
| Eco88I | CYCGRG | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 291 |
| FaiI | YATR | 4 cut(s) | 225, 254, 289, 313 |
| FatI | CATG | 1 cut(s) | 287 |
| FauI | CCCGC | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 3 cut(s) | 230, 243, 282 |
| GlaI | GCGC | 2 cut(s) | 15, 222 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeII | RGCGCY | 1 cut(s) | 17 |
| HapII | CCGG | 1 cut(s) | 19 |
| HhaI | GCGC | 2 cut(s) | 16, 223 |
| Hin1II | CATG | 1 cut(s) | 291 |
| Hin6I | GCGC | 2 cut(s) | 14, 221 |
| HinP1I | GCGC | 2 cut(s) | 14, 221 |
| HindIII | AAGCTT | 1 cut(s) | 195 |
| HinfI | GANTC | 1 cut(s) | 85 |
| HpaII | CCGG | 1 cut(s) | 19 |
| HphI | GGTGA | 2 cut(s) | 125, 179 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 127 |
| Hpy188III | TCNNGA | 2 cut(s) | 101, 300 |
| HpyAV | CCTTC | 1 cut(s) | 65 |
| HpyCH4III | ACNGT | 1 cut(s) | 203 |
| HpyCH4IV | ACGT | 1 cut(s) | 304 |
| HpyCH4V | TGCA | 2 cut(s) | 153, 164 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 239 |
| HpyF3I | CTNAG | 1 cut(s) | 91 |
| HpySE526I | ACGT | 1 cut(s) | 304 |
| Hsp92II | CATG | 1 cut(s) | 291 |
| HspAI | GCGC | 2 cut(s) | 14, 221 |
| LmnI | GCTCC | 1 cut(s) | 21 |
| LpnPI | CCDG | 5 cut(s) | 32, 125, 150, 162, 285 |
| Lsp1109I | GCAGC | 1 cut(s) | 82 |
| MaeI | CTAG | 3 cut(s) | 230, 243, 282 |
| MaeII | ACGT | 1 cut(s) | 304 |
| MboII | GAAGA | 1 cut(s) | 158 |
| MlyI | GAGTC | 1 cut(s) | 79 |
| MmeI | TCCRAC | 1 cut(s) | 32 |
| MnlI | CCTC | 3 cut(s) | 121, 163, 271 |
| MseI | TTAA | 2 cut(s) | 29, 264 |
| MspI | CCGG | 1 cut(s) | 19 |
| MspR9I | CCNGG | 1 cut(s) | 20 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 239 |
| NciI | CCSGG | 1 cut(s) | 20 |
| NheI | GCTAGC | 2 cut(s) | 229, 281 |
| NlaIII | CATG | 1 cut(s) | 291 |
| PaeR7I | CTCGAG | 1 cut(s) | 99 |
| PaqCI | CACCTGC | 1 cut(s) | 155 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| RsaI | GTAC | 1 cut(s) | 247 |
| RsaNI | GTAC | 1 cut(s) | 246 |
| SaqAI | TTAA | 2 cut(s) | 29, 264 |
| SatI | GCNGC | 1 cut(s) | 96 |
| SchI | GAGTC | 1 cut(s) | 79 |
| ScrFI | CCNGG | 1 cut(s) | 20 |
| Sfr274I | CTCGAG | 1 cut(s) | 99 |
| SlaI | CTCGAG | 1 cut(s) | 99 |
| SmlI | CTYRAG | 1 cut(s) | 99 |
| SmoI | CTYRAG | 1 cut(s) | 99 |
| SsiI | CCGC | 1 cut(s) | 46 |
| SspMI | CTAG | 3 cut(s) | 230, 243, 282 |
| StyD4I | CCNGG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 203 |
| TaiI | ACGT | 1 cut(s) | 307 |
| TaqI | TCGA | 1 cut(s) | 100 |
| TatI | WGTACW | 1 cut(s) | 245 |
| Tru1I | TTAA | 2 cut(s) | 29, 264 |
| Tru9I | TTAA | 2 cut(s) | 29, 264 |
| TseI | GCWGC | 1 cut(s) | 95 |
| XhoI | CTCGAG | 1 cut(s) | 99 |
| XspI | CTAG | 3 cut(s) | 230, 243, 282 |