Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 2 - 77 | 2.1e-12 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 146 |
| AcoI | YGGCCR | 1 cut(s) | 159 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 107, 108, 211 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 32 |
| AluBI | AGCT | 4 cut(s) | 11, 83, 137, 218 |
| AluI | AGCT | 4 cut(s) | 11, 83, 137, 218 |
| AoxI | GGCC | 1 cut(s) | 159 |
| ApeKI | GCWGC | 2 cut(s) | 80, 218 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 28 |
| AseI | ATTAAT | 1 cut(s) | 165 |
| AspS9I | GGNCC | 1 cut(s) | 87 |
| AvaII | GGWCC | 1 cut(s) | 87 |
| BalI | TGGCCA | 1 cut(s) | 161 |
| BbvI | GCAGC | 2 cut(s) | 92, 205 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BisI | GCNGC | 2 cut(s) | 81, 219 |
| BlsI | GCNGC | 2 cut(s) | 82, 220 |
| Bme18I | GGWCC | 1 cut(s) | 87 |
| BmgT120I | GGNCC | 1 cut(s) | 87 |
| BmrI | ACTGGG | 1 cut(s) | 200 |
| BmuI | ACTGGG | 1 cut(s) | 200 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| BsaJI | CCNNGG | 1 cut(s) | 90 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 30, 30, 60 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 107, 108, 211 |
| Bse1I | ACTGG | 1 cut(s) | 206 |
| BseDI | CCNNGG | 1 cut(s) | 90 |
| BseGI | GGATG | 1 cut(s) | 64 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 107, 108, 211 |
| BseNI | ACTGG | 1 cut(s) | 206 |
| BseXI | GCAGC | 2 cut(s) | 92, 205 |
| BshFI | GGCC | 1 cut(s) | 161 |
| BslFI | GGGAC | 1 cut(s) | 84 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 107, 108, 211 |
| BsmFI | GGGAC | 1 cut(s) | 84 |
| BsnI | GGCC | 1 cut(s) | 161 |
| Bsp143I | GATC | 1 cut(s) | 183 |
| BspACI | CCGC | 1 cut(s) | 146 |
| BspANI | GGCC | 1 cut(s) | 161 |
| BsrI | ACTGG | 1 cut(s) | 206 |
| BssECI | CCNNGG | 1 cut(s) | 90 |
| BssMI | GATC | 1 cut(s) | 183 |
| BssT1I | CCWWGG | 1 cut(s) | 90 |
| BstF5I | GGATG | 1 cut(s) | 64 |
| BstKTI | GATC | 1 cut(s) | 186 |
| BstMBI | GATC | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 143 |
| BstV1I | GCAGC | 2 cut(s) | 92, 205 |
| BsuRI | GGCC | 1 cut(s) | 161 |
| BtsCI | GGATG | 1 cut(s) | 64 |
| BtsI | GCAGTG | 1 cut(s) | 121 |
| BtsIMutI | CAGTG | 1 cut(s) | 121 |
| Cfr13I | GGNCC | 1 cut(s) | 87 |
| CviJI | RGCY | 8 cut(s) | 11, 23, 83, 131, 137, 161, 174, 218 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 23, 83, 131, 137, 161, 174, 218 |
| DpnI | GATC | 1 cut(s) | 185 |
| DpnII | GATC | 1 cut(s) | 183 |
| EaeI | YGGCCR | 1 cut(s) | 159 |
| Eco130I | CCWWGG | 1 cut(s) | 90 |
| Eco47I | GGWCC | 1 cut(s) | 87 |
| EcoT14I | CCWWGG | 1 cut(s) | 90 |
| ErhI | CCWWGG | 1 cut(s) | 90 |
| FaiI | YATR | 1 cut(s) | 107 |
| FaqI | GGGAC | 1 cut(s) | 84 |
| FauI | CCCGC | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 2 cut(s) | 81, 219 |
| FokI | GGATG | 1 cut(s) | 71 |
| Fsp4HI | GCNGC | 2 cut(s) | 81, 219 |
| FspBI | CTAG | 1 cut(s) | 27 |
| GluI | GCNGC | 2 cut(s) | 81, 219 |
| HaeIII | GGCC | 1 cut(s) | 161 |
| HindIII | AAGCTT | 1 cut(s) | 135 |
| HinfI | GANTC | 1 cut(s) | 200 |
| Hpy188III | TCNNGA | 1 cut(s) | 193 |
| HpyCH4V | TGCA | 2 cut(s) | 121, 126 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 143 |
| Kzo9I | GATC | 1 cut(s) | 183 |
| LmnI | GCTCC | 1 cut(s) | 8 |
| LpnPI | CCDG | 3 cut(s) | 5, 160, 219 |
| Lsp1109I | GCAGC | 2 cut(s) | 92, 205 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeIII | GTNAC | 1 cut(s) | 197 |
| MalI | GATC | 1 cut(s) | 185 |
| MboI | GATC | 1 cut(s) | 183 |
| MlsI | TGGCCA | 1 cut(s) | 161 |
| MluNI | TGGCCA | 1 cut(s) | 161 |
| MlyI | GAGTC | 1 cut(s) | 194 |
| MnlI | CCTC | 1 cut(s) | 181 |
| Mox20I | TGGCCA | 1 cut(s) | 161 |
| MscI | TGGCCA | 1 cut(s) | 161 |
| MseI | TTAA | 1 cut(s) | 165 |
| Msp20I | TGGCCA | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 143 |
| NdeII | GATC | 1 cut(s) | 183 |
| NmuCI | GTSAC | 1 cut(s) | 197 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 12 |
| PkrI | GCNGC | 2 cut(s) | 82, 220 |
| PleI | GAGTC | 1 cut(s) | 194 |
| PpsI | GAGTC | 1 cut(s) | 194 |
| PshBI | ATTAAT | 1 cut(s) | 165 |
| PspPI | GGNCC | 1 cut(s) | 87 |
| SaqAI | TTAA | 1 cut(s) | 165 |
| SatI | GCNGC | 2 cut(s) | 81, 219 |
| Sau3AI | GATC | 1 cut(s) | 183 |
| Sau96I | GGNCC | 1 cut(s) | 87 |
| SchI | GAGTC | 1 cut(s) | 194 |
| SetI | ASST | 6 cut(s) | 13, 85, 96, 139, 192, 220 |
| SinI | GGWCC | 1 cut(s) | 87 |
| SsiI | CCGC | 1 cut(s) | 146 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyI | CCWWGG | 1 cut(s) | 90 |
| TaqI | TCGA | 3 cut(s) | 76, 186, 192 |
| Tru1I | TTAA | 1 cut(s) | 165 |
| Tru9I | TTAA | 1 cut(s) | 165 |
| TscAI | CASTG | 1 cut(s) | 128 |
| TseFI | GTSAC | 1 cut(s) | 197 |
| TseI | GCWGC | 2 cut(s) | 80, 218 |
| Tsp45I | GTSAC | 1 cut(s) | 197 |
| TspGWI | ACGGA | 1 cut(s) | 21 |
| TspRI | CASTG | 1 cut(s) | 128 |
| VpaK11BI | GGWCC | 1 cut(s) | 87 |
| VspI | ATTAAT | 1 cut(s) | 165 |
| XspI | CTAG | 1 cut(s) | 27 |