Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 4 - 104 | 3e-16 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 310 |
| AfaI | GTAC | 1 cut(s) | 270 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 208, 310 |
| AgsI | TTSAA | 2 cut(s) | 92, 136 |
| AluBI | AGCT | 3 cut(s) | 95, 104, 251 |
| AluI | AGCT | 3 cut(s) | 95, 104, 251 |
| Alw26I | GTCTC | 1 cut(s) | 146 |
| BbsI | GAAGAC | 1 cut(s) | 204 |
| BccI | CCATC | 1 cut(s) | 187 |
| BceAI | ACGGC | 1 cut(s) | 58 |
| BcoDI | GTCTC | 1 cut(s) | 146 |
| BfaI | CTAG | 1 cut(s) | 324 |
| BpiI | GAAGAC | 1 cut(s) | 204 |
| BpuEI | CTTGAG | 1 cut(s) | 205 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 208, 310 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 208, 310 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseYI | CCCAGC | 1 cut(s) | 104 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 208, 310 |
| BsmAI | GTCTC | 1 cut(s) | 146 |
| BsmI | GAATGC | 1 cut(s) | 75 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| Bst6I | CTCTTC | 1 cut(s) | 262 |
| BstMAI | GTCTC | 1 cut(s) | 146 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 101 |
| BstV2I | GAAGAC | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 1 cut(s) | 24 |
| Csp6I | GTAC | 1 cut(s) | 269 |
| CviJI | RGCY | 6 cut(s) | 11, 47, 95, 104, 109, 251 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 47, 95, 104, 109, 251 |
| CviQI | GTAC | 1 cut(s) | 269 |
| Eam1104I | CTCTTC | 1 cut(s) | 262 |
| EarI | CTCTTC | 1 cut(s) | 262 |
| FaiI | YATR | 3 cut(s) | 41, 98, 306 |
| FspBI | CTAG | 1 cut(s) | 324 |
| GsaI | CCCAGC | 1 cut(s) | 108 |
| HinfI | GANTC | 1 cut(s) | 344 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| Hpy188III | TCNNGA | 3 cut(s) | 184, 284, 350 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 2 cut(s) | 79, 164 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 101 |
| LpnPI | CCDG | 4 cut(s) | 12, 17, 90, 251 |
| MaeI | CTAG | 1 cut(s) | 324 |
| MaeIII | GTNAC | 1 cut(s) | 172 |
| MboII | GAAGA | 3 cut(s) | 209, 239, 249 |
| MnlI | CCTC | 1 cut(s) | 202 |
| Mva1269I | GAATGC | 1 cut(s) | 75 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 101 |
| PctI | GAATGC | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 344 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 310 |
| PspFI | CCCAGC | 1 cut(s) | 104 |
| RsaI | GTAC | 1 cut(s) | 270 |
| RsaNI | GTAC | 1 cut(s) | 269 |
| SetI | ASST | 7 cut(s) | 97, 106, 133, 213, 217, 253, 270 |
| SmlI | CTYRAG | 2 cut(s) | 184, 350 |
| SmoI | CTYRAG | 2 cut(s) | 184, 350 |
| SspMI | CTAG | 1 cut(s) | 324 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TfiI | GAWTC | 1 cut(s) | 344 |
| TscAI | CASTG | 1 cut(s) | 31 |
| TspGWI | ACGGA | 1 cut(s) | 250 |
| TspRI | CASTG | 1 cut(s) | 31 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 310 |
| XspI | CTAG | 1 cut(s) | 324 |