ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 314 |
| AcoI | YGGCCR | 1 cut(s) | 153 |
| AcsI | RAATTY | 1 cut(s) | 120 |
| AluBI | AGCT | 1 cut(s) | 104 |
| AluI | AGCT | 1 cut(s) | 104 |
| Alw26I | GTCTC | 1 cut(s) | 206 |
| AoxI | GGCC | 2 cut(s) | 153, 165 |
| ApeKI | GCWGC | 1 cut(s) | 29 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| AspS9I | GGNCC | 1 cut(s) | 166 |
| AsuHPI | GGTGA | 1 cut(s) | 59 |
| BalI | TGGCCA | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 16 |
| BcoDI | GTCTC | 1 cut(s) | 206 |
| BfaI | CTAG | 1 cut(s) | 177 |
| BfmI | CTRYAG | 1 cut(s) | 227 |
| BisI | GCNGC | 1 cut(s) | 30 |
| BlsI | GCNGC | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 1 cut(s) | 166 |
| BmrI | ACTGGG | 1 cut(s) | 344 |
| BmsI | GCATC | 1 cut(s) | 291 |
| BmuI | ACTGGG | 1 cut(s) | 344 |
| Bpu10I | CCTNAGC | 1 cut(s) | 273 |
| Bse1I | ACTGG | 1 cut(s) | 350 |
| BseGI | GGATG | 1 cut(s) | 238 |
| BseMII | CTCAG | 2 cut(s) | 72, 287 |
| BseNI | ACTGG | 1 cut(s) | 350 |
| BseRI | GAGGAG | 1 cut(s) | 224 |
| BseXI | GCAGC | 1 cut(s) | 16 |
| BshFI | GGCC | 2 cut(s) | 155, 167 |
| BslFI | GGGAC | 1 cut(s) | 277 |
| BsmAI | GTCTC | 1 cut(s) | 206 |
| BsmFI | GGGAC | 1 cut(s) | 277 |
| BsnI | GGCC | 2 cut(s) | 155, 167 |
| Bsp143I | GATC | 1 cut(s) | 196 |
| BspANI | GGCC | 2 cut(s) | 155, 167 |
| BspCNI | CTCAG | 2 cut(s) | 71, 286 |
| BspMAI | CTGCAG | 1 cut(s) | 231 |
| BsrI | ACTGG | 1 cut(s) | 350 |
| BssMI | GATC | 1 cut(s) | 196 |
| Bst4CI | ACNGT | 2 cut(s) | 86, 149 |
| BstC8I | GCNNGC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 2 cut(s) | 58, 273 |
| BstF5I | GGATG | 1 cut(s) | 238 |
| BstKTI | GATC | 1 cut(s) | 199 |
| BstMAI | GTCTC | 1 cut(s) | 206 |
| BstMBI | GATC | 1 cut(s) | 196 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 173 |
| BstNSI | RCATGY | 1 cut(s) | 100 |
| BstSFI | CTRYAG | 1 cut(s) | 227 |
| BstV1I | GCAGC | 1 cut(s) | 16 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 163 |
| BsuRI | GGCC | 2 cut(s) | 155, 167 |
| BtsCI | GGATG | 1 cut(s) | 238 |
| Cac8I | GCNNGC | 1 cut(s) | 102 |
| Cfr13I | GGNCC | 1 cut(s) | 166 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 132, 167 |
| CviAII | CATG | 1 cut(s) | 97 |
| CviJI | RGCY | 5 cut(s) | 29, 104, 155, 167, 345 |
| CviKI_1 | RGCY | 5 cut(s) | 29, 104, 155, 167, 345 |
| DdeI | CTNAG | 2 cut(s) | 58, 273 |
| DpnI | GATC | 1 cut(s) | 198 |
| DpnII | GATC | 1 cut(s) | 196 |
| EaeI | YGGCCR | 1 cut(s) | 153 |
| EcoRI | GAATTC | 1 cut(s) | 120 |
| FaeI | CATG | 1 cut(s) | 100 |
| FaiI | YATR | 5 cut(s) | 20, 98, 264, 314, 329 |
| FaqI | GGGAC | 1 cut(s) | 277 |
| FatI | CATG | 1 cut(s) | 96 |
| Fnu4HI | GCNGC | 1 cut(s) | 30 |
| FokI | GGATG | 1 cut(s) | 245 |
| Fsp4HI | GCNGC | 1 cut(s) | 30 |
| FspBI | CTAG | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 30 |
| HaeIII | GGCC | 2 cut(s) | 155, 167 |
| Hin1II | CATG | 1 cut(s) | 100 |
| HincII | GTYRAC | 1 cut(s) | 188 |
| HindII | GTYRAC | 1 cut(s) | 188 |
| HindIII | AAGCTT | 1 cut(s) | 102 |
| HinfI | GANTC | 3 cut(s) | 11, 73, 214 |
| HphI | GGTGA | 1 cut(s) | 59 |
| Hpy166II | GTNNAC | 1 cut(s) | 188 |
| Hpy188I | TCNGA | 2 cut(s) | 61, 72 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 137 |
| Hpy8I | GTNNAC | 1 cut(s) | 188 |
| HpyCH4III | ACNGT | 2 cut(s) | 86, 149 |
| HpyCH4IV | ACGT | 1 cut(s) | 290 |
| HpyCH4V | TGCA | 3 cut(s) | 100, 229, 304 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 173 |
| HpyF3I | CTNAG | 2 cut(s) | 58, 273 |
| HpySE526I | ACGT | 1 cut(s) | 290 |
| Hsp92II | CATG | 1 cut(s) | 100 |
| Kzo9I | GATC | 1 cut(s) | 196 |
| LpnPI | CCDG | 5 cut(s) | 30, 215, 239, 260, 267 |
| Lsp1109I | GCAGC | 1 cut(s) | 16 |
| LweI | GCATC | 1 cut(s) | 291 |
| MaeI | CTAG | 1 cut(s) | 177 |
| MaeII | ACGT | 1 cut(s) | 290 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 1 cut(s) | 198 |
| MboI | GATC | 1 cut(s) | 196 |
| MboII | GAAGA | 1 cut(s) | 6 |
| MfeI | CAATTG | 1 cut(s) | 250 |
| MlsI | TGGCCA | 1 cut(s) | 155 |
| MluCI | AATT | 4 cut(s) | 120, 250, 267, 308 |
| MluNI | TGGCCA | 1 cut(s) | 155 |
| MlyI | GAGTC | 1 cut(s) | 208 |
| MmeI | TCCRAC | 1 cut(s) | 50 |
| MnlI | CCTC | 5 cut(s) | 55, 202, 238, 307, 356 |
| Mox20I | TGGCCA | 1 cut(s) | 155 |
| MscI | TGGCCA | 1 cut(s) | 155 |
| Msp20I | TGGCCA | 1 cut(s) | 155 |
| MunI | CAATTG | 1 cut(s) | 250 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 173 |
| NdeII | GATC | 1 cut(s) | 196 |
| NlaIII | CATG | 1 cut(s) | 100 |
| NmuCI | GTSAC | 1 cut(s) | 47 |
| NspI | RCATGY | 1 cut(s) | 100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 296 |
| PfeI | GAWTC | 2 cut(s) | 11, 73 |
| PkrI | GCNGC | 1 cut(s) | 31 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| PsiI | TTATAA | 1 cut(s) | 314 |
| PspPI | GGNCC | 1 cut(s) | 166 |
| PstI | CTGCAG | 1 cut(s) | 231 |
| SatI | GCNGC | 1 cut(s) | 30 |
| Sau3AI | GATC | 1 cut(s) | 196 |
| Sau96I | GGNCC | 1 cut(s) | 166 |
| SbfI | CCTGCAGG | 1 cut(s) | 231 |
| SchI | GAGTC | 1 cut(s) | 208 |
| SdaI | CCTGCAGG | 1 cut(s) | 231 |
| SetI | ASST | 7 cut(s) | 49, 66, 106, 187, 193, 286, 293 |
| SfaNI | GCATC | 1 cut(s) | 291 |
| SfcI | CTRYAG | 1 cut(s) | 227 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 231 |
| Sse9I | AATT | 4 cut(s) | 120, 250, 267, 308 |
| SspMI | CTAG | 1 cut(s) | 177 |
| TaaI | ACNGT | 2 cut(s) | 86, 149 |
| TaiI | ACGT | 1 cut(s) | 293 |
| TaqI | TCGA | 2 cut(s) | 124, 299 |
| TasI | AATT | 4 cut(s) | 120, 250, 267, 308 |
| TfiI | GAWTC | 2 cut(s) | 11, 73 |
| TseFI | GTSAC | 1 cut(s) | 47 |
| TseI | GCWGC | 1 cut(s) | 29 |
| Tsp45I | GTSAC | 1 cut(s) | 47 |
| XapI | RAATTY | 1 cut(s) | 120 |
| XceI | RCATGY | 1 cut(s) | 100 |
| XspI | CTAG | 1 cut(s) | 177 |