Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 286 |
| AcuI | CTGAAG | 2 cut(s) | 96, 108 |
| AgsI | TTSAA | 2 cut(s) | 146, 293 |
| AluBI | AGCT | 3 cut(s) | 68, 122, 194 |
| AluI | AGCT | 3 cut(s) | 68, 122, 194 |
| Alw26I | GTCTC | 1 cut(s) | 474 |
| AoxI | GGCC | 1 cut(s) | 433 |
| ApeKI | GCWGC | 3 cut(s) | 65, 194, 203 |
| AspS9I | GGNCC | 1 cut(s) | 433 |
| AsuHPI | GGTGA | 1 cut(s) | 229 |
| AxyI | CCTNAGG | 1 cut(s) | 429 |
| BbvI | GCAGC | 3 cut(s) | 77, 181, 190 |
| BcoDI | GTCTC | 1 cut(s) | 474 |
| BfaI | CTAG | 1 cut(s) | 212 |
| BisI | GCNGC | 3 cut(s) | 66, 195, 204 |
| BlsI | GCNGC | 3 cut(s) | 67, 196, 205 |
| BmgT120I | GGNCC | 1 cut(s) | 433 |
| BmsI | GCATC | 1 cut(s) | 34 |
| BsaBI | GATNNNNATC | 1 cut(s) | 450 |
| Bse21I | CCTNAGG | 1 cut(s) | 429 |
| Bse3DI | GCAATG | 1 cut(s) | 414 |
| Bse8I | GATNNNNATC | 1 cut(s) | 450 |
| BseJI | GATNNNNATC | 1 cut(s) | 450 |
| BseMI | GCAATG | 1 cut(s) | 414 |
| BseXI | GCAGC | 3 cut(s) | 77, 181, 190 |
| BsgI | GTGCAG | 1 cut(s) | 84 |
| BshFI | GGCC | 1 cut(s) | 435 |
| BsmAI | GTCTC | 1 cut(s) | 474 |
| BsmI | GAATGC | 1 cut(s) | 86 |
| BsnI | GGCC | 1 cut(s) | 435 |
| BspANI | GGCC | 1 cut(s) | 435 |
| BsrDI | GCAATG | 1 cut(s) | 414 |
| BstDEI | CTNAG | 2 cut(s) | 347, 429 |
| BstMAI | GTCTC | 1 cut(s) | 474 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 203 |
| BstV1I | GCAGC | 3 cut(s) | 77, 181, 190 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 322 |
| Bsu36I | CCTNAGG | 1 cut(s) | 429 |
| BsuRI | GGCC | 1 cut(s) | 435 |
| BtsI | GCAGTG | 1 cut(s) | 160 |
| BtsIMutI | CAGTG | 1 cut(s) | 160 |
| Cfr13I | GGNCC | 1 cut(s) | 433 |
| CviAII | CATG | 3 cut(s) | 224, 236, 394 |
| CviJI | RGCY | 6 cut(s) | 68, 122, 194, 275, 380, 435 |
| CviKI_1 | RGCY | 6 cut(s) | 68, 122, 194, 275, 380, 435 |
| DdeI | CTNAG | 2 cut(s) | 347, 429 |
| DraI | TTTAAA | 1 cut(s) | 105 |
| Eco57I | CTGAAG | 2 cut(s) | 96, 108 |
| Eco81I | CCTNAGG | 1 cut(s) | 429 |
| EcoO109I | RGGNCCY | 1 cut(s) | 433 |
| FaeI | CATG | 3 cut(s) | 227, 239, 397 |
| FaiI | YATR | 8 cut(s) | 114, 180, 225, 237, 395, 403, 460, 501 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 125, 157, 183, 215 |
| FatI | CATG | 3 cut(s) | 223, 235, 393 |
| Fnu4HI | GCNGC | 3 cut(s) | 66, 195, 204 |
| Fsp4HI | GCNGC | 3 cut(s) | 66, 195, 204 |
| FspBI | CTAG | 1 cut(s) | 212 |
| GluI | GCNGC | 3 cut(s) | 66, 195, 204 |
| HaeIII | GGCC | 1 cut(s) | 435 |
| Hin1II | CATG | 3 cut(s) | 227, 239, 397 |
| HinfI | GANTC | 3 cut(s) | 4, 220, 343 |
| HphI | GGTGA | 1 cut(s) | 229 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 139 |
| Hpy188III | TCNNGA | 3 cut(s) | 74, 95, 212 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 139 |
| HpyCH4IV | ACGT | 1 cut(s) | 286 |
| HpyCH4V | TGCA | 3 cut(s) | 25, 65, 178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 203 |
| HpyF3I | CTNAG | 2 cut(s) | 347, 429 |
| HpySE526I | ACGT | 1 cut(s) | 286 |
| Hsp92II | CATG | 3 cut(s) | 227, 239, 397 |
| LpnPI | CCDG | 2 cut(s) | 87, 111 |
| Lsp1109I | GCAGC | 3 cut(s) | 77, 181, 190 |
| LweI | GCATC | 1 cut(s) | 34 |
| MaeI | CTAG | 1 cut(s) | 212 |
| MaeII | ACGT | 1 cut(s) | 286 |
| MboII | GAAGA | 4 cut(s) | 89, 413, 416, 505 |
| MluCI | AATT | 1 cut(s) | 412 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 1 cut(s) | 311 |
| MnlI | CCTC | 4 cut(s) | 208, 255, 446, 475 |
| MseI | TTAA | 1 cut(s) | 104 |
| Mva1269I | GAATGC | 1 cut(s) | 86 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 203 |
| NlaIII | CATG | 3 cut(s) | 227, 239, 397 |
| PctI | GAATGC | 1 cut(s) | 86 |
| PfeI | GAWTC | 2 cut(s) | 220, 343 |
| PkrI | GCNGC | 3 cut(s) | 67, 196, 205 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp1406I | AACGTT | 1 cut(s) | 286 |
| PspPI | GGNCC | 1 cut(s) | 433 |
| SaqAI | TTAA | 1 cut(s) | 104 |
| SatI | GCNGC | 3 cut(s) | 66, 195, 204 |
| Sau96I | GGNCC | 1 cut(s) | 433 |
| SchI | GAGTC | 1 cut(s) | 13 |
| SetI | ASST | 8 cut(s) | 23, 70, 124, 130, 138, 196, 219, 289 |
| SfaNI | GCATC | 1 cut(s) | 34 |
| Sse9I | AATT | 1 cut(s) | 412 |
| SspMI | CTAG | 1 cut(s) | 212 |
| TaiI | ACGT | 1 cut(s) | 289 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 1 cut(s) | 412 |
| TfiI | GAWTC | 2 cut(s) | 220, 343 |
| Tru1I | TTAA | 1 cut(s) | 104 |
| Tru9I | TTAA | 1 cut(s) | 104 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TseI | GCWGC | 3 cut(s) | 65, 194, 203 |
| TspDTI | ATGAA | 3 cut(s) | 129, 425, 494 |
| TspRI | CASTG | 1 cut(s) | 160 |
| XbaI | TCTAGA | 1 cut(s) | 211 |
| XspI | CTAG | 1 cut(s) | 212 |