Reverse transcriptase-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 910, 945 |
| AccII | CGCG | 3 cut(s) | 114, 868, 1095 |
| AciI | CCGC | 2 cut(s) | 114, 390 |
| AclWI | GGATC | 2 cut(s) | 134, 1021 |
| AcuI | CTGAAG | 1 cut(s) | 86 |
| AfaI | GTAC | 1 cut(s) | 49 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 14, 830, 989, 1127 |
| AflIII | ACRYGT | 1 cut(s) | 866 |
| AgsI | TTSAA | 2 cut(s) | 377, 572 |
| AjnI | CCWGG | 1 cut(s) | 328 |
| AluBI | AGCT | 6 cut(s) | 100, 424, 487, 508, 568, 1042 |
| AluI | AGCT | 6 cut(s) | 100, 424, 487, 508, 568, 1042 |
| Alw26I | GTCTC | 2 cut(s) | 701, 1193 |
| AlwI | GGATC | 2 cut(s) | 134, 1021 |
| Ama87I | CYCGRG | 2 cut(s) | 130, 527 |
| ApeKI | GCWGC | 3 cut(s) | 421, 994, 997 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 725, 757 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 397, 819 |
| AspLEI | GCGC | 2 cut(s) | 114, 697 |
| AsuC2I | CCSGG | 1 cut(s) | 538 |
| AsuHPI | GGTGA | 6 cut(s) | 86, 236, 289, 481, 913, 1060 |
| AsuII | TTCGAA | 2 cut(s) | 731, 1037 |
| AvaI | CYCGRG | 2 cut(s) | 130, 527 |
| BaeGI | GKGCMC | 1 cut(s) | 320 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 39, 72 |
| BbsI | GAAGAC | 1 cut(s) | 365 |
| BbvI | GCAGC | 3 cut(s) | 433, 981, 984 |
| BccI | CCATC | 4 cut(s) | 7, 418, 674, 781 |
| BceAI | ACGGC | 2 cut(s) | 823, 1063 |
| BciT130I | CCWGG | 1 cut(s) | 330 |
| BcnI | CCSGG | 1 cut(s) | 538 |
| BcoDI | GTCTC | 2 cut(s) | 701, 1193 |
| BfaI | CTAG | 2 cut(s) | 59, 351 |
| BfmI | CTRYAG | 2 cut(s) | 474, 1027 |
| BglII | AGATCT | 1 cut(s) | 28 |
| BisI | GCNGC | 3 cut(s) | 422, 995, 998 |
| BlsI | GCNGC | 3 cut(s) | 423, 996, 999 |
| Bme1390I | CCNGG | 2 cut(s) | 330, 538 |
| BmeT110I | CYCGRG | 2 cut(s) | 130, 527 |
| BmiI | GGNNCC | 1 cut(s) | 481 |
| BmrFI | CCNGG | 2 cut(s) | 330, 538 |
| BmsI | GCATC | 3 cut(s) | 151, 193, 682 |
| BpiI | GAAGAC | 1 cut(s) | 365 |
| BpmI | CTGGAG | 2 cut(s) | 281, 404 |
| Bpu14I | TTCGAA | 2 cut(s) | 731, 1037 |
| BpuEI | CTTGAG | 2 cut(s) | 662, 958 |
| BpuMI | CCSGG | 1 cut(s) | 538 |
| Bsa29I | ATCGAT | 1 cut(s) | 1161 |
| BsaI | GGTCTC | 1 cut(s) | 701 |
| BsaJI | CCNNGG | 3 cut(s) | 8, 528, 537 |
| BsaWI | WCCGGW | 1 cut(s) | 1110 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 417, 447 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 14, 830, 989, 1127 |
| Bse1I | ACTGG | 2 cut(s) | 76, 1081 |
| Bse3DI | GCAATG | 1 cut(s) | 743 |
| BseBI | CCWGG | 1 cut(s) | 330 |
| BseCI | ATCGAT | 1 cut(s) | 1161 |
| BseDI | CCNNGG | 3 cut(s) | 8, 528, 537 |
| BseGI | GGATG | 5 cut(s) | 18, 196, 595, 697, 962 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 14, 830, 989, 1127 |
| BseMI | GCAATG | 1 cut(s) | 743 |
| BseMII | CTCAG | 1 cut(s) | 793 |
| BseNI | ACTGG | 2 cut(s) | 76, 1081 |
| BseRI | GAGGAG | 2 cut(s) | 614, 872 |
| BseSI | GKGCMC | 1 cut(s) | 320 |
| BseXI | GCAGC | 3 cut(s) | 433, 981, 984 |
| Bsh1236I | CGCG | 3 cut(s) | 114, 868, 1095 |
| BshVI | ATCGAT | 1 cut(s) | 1161 |
| BsiHKCI | CYCGRG | 2 cut(s) | 130, 527 |
| BsiSI | CCGG | 2 cut(s) | 537, 1111 |
| BslFI | GGGAC | 1 cut(s) | 510 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 14, 830, 989, 1127 |
| BsmAI | GTCTC | 2 cut(s) | 701, 1193 |
| BsmBI | CGTCTC | 1 cut(s) | 1193 |
| BsmFI | GGGAC | 1 cut(s) | 510 |
| BsmI | GAATGC | 1 cut(s) | 542 |
| Bso31I | GGTCTC | 1 cut(s) | 701 |
| BsoBI | CYCGRG | 2 cut(s) | 130, 527 |
| Bsp119I | TTCGAA | 2 cut(s) | 731, 1037 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| Bsp143I | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| Bsp68I | TCGCGA | 1 cut(s) | 1095 |
| BspACI | CCGC | 2 cut(s) | 114, 390 |
| BspCNI | CTCAG | 1 cut(s) | 792 |
| BspDI | ATCGAT | 1 cut(s) | 1161 |
| BspFNI | CGCG | 3 cut(s) | 114, 868, 1095 |
| BspLI | GGNNCC | 1 cut(s) | 481 |
| BspPI | GGATC | 2 cut(s) | 134, 1021 |
| BspT104I | TTCGAA | 2 cut(s) | 731, 1037 |
| BspTNI | GGTCTC | 1 cut(s) | 701 |
| BsrDI | GCAATG | 1 cut(s) | 743 |
| BsrI | ACTGG | 2 cut(s) | 76, 1081 |
| BssECI | CCNNGG | 3 cut(s) | 8, 528, 537 |
| BssMI | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| BssT1I | CCWWGG | 1 cut(s) | 8 |
| Bst2UI | CCWGG | 1 cut(s) | 330 |
| Bst4CI | ACNGT | 2 cut(s) | 896, 1031 |
| BstBI | TTCGAA | 2 cut(s) | 731, 1037 |
| BstC8I | GCNNGC | 2 cut(s) | 556, 1118 |
| BstDEI | CTNAG | 2 cut(s) | 779, 843 |
| BstEII | GGTNACC | 1 cut(s) | 532 |
| BstF5I | GGATG | 5 cut(s) | 18, 196, 595, 697, 962 |
| BstFNI | CGCG | 3 cut(s) | 114, 868, 1095 |
| BstHHI | GCGC | 2 cut(s) | 114, 697 |
| BstKTI | GATC | 6 cut(s) | 31, 129, 346, 450, 1016, 1165 |
| BstMAI | GTCTC | 2 cut(s) | 701, 1193 |
| BstMBI | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 574, 694, 790 |
| BstNI | CCWGG | 1 cut(s) | 330 |
| BstNSI | RCATGY | 2 cut(s) | 155, 760 |
| BstPI | GGTNACC | 1 cut(s) | 532 |
| BstSCI | CCNGG | 2 cut(s) | 328, 536 |
| BstSFI | CTRYAG | 2 cut(s) | 474, 1027 |
| BstSLI | GKGCMC | 1 cut(s) | 320 |
| BstUI | CGCG | 3 cut(s) | 114, 868, 1095 |
| BstV1I | GCAGC | 3 cut(s) | 433, 981, 984 |
| BstV2I | GAAGAC | 1 cut(s) | 365 |
| BstX2I | RGATCY | 2 cut(s) | 28, 126 |
| BstYI | RGATCY | 2 cut(s) | 28, 126 |
| Bsu15I | ATCGAT | 1 cut(s) | 1161 |
| BsuTUI | ATCGAT | 1 cut(s) | 1161 |
| BtgZI | GCGATG | 1 cut(s) | 693 |
| BtsCI | GGATG | 5 cut(s) | 18, 196, 595, 697, 962 |
| BtuMI | TCGCGA | 1 cut(s) | 1095 |
| Cac8I | GCNNGC | 2 cut(s) | 556, 1118 |
| CfoI | GCGC | 2 cut(s) | 114, 697 |
| ClaI | ATCGAT | 1 cut(s) | 1161 |
| Csp6I | GTAC | 1 cut(s) | 48 |
| CviAII | CATG | 4 cut(s) | 152, 547, 654, 757 |
| CviQI | GTAC | 1 cut(s) | 48 |
| DdeI | CTNAG | 2 cut(s) | 779, 843 |
| DpnI | GATC | 6 cut(s) | 30, 128, 345, 449, 1015, 1164 |
| DpnII | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| DraI | TTTAAA | 1 cut(s) | 1060 |
| Eco130I | CCWWGG | 1 cut(s) | 8 |
| Eco31I | GGTCTC | 1 cut(s) | 701 |
| Eco57I | CTGAAG | 1 cut(s) | 86 |
| Eco88I | CYCGRG | 2 cut(s) | 130, 527 |
| Eco91I | GGTNACC | 1 cut(s) | 532 |
| EcoO65I | GGTNACC | 1 cut(s) | 532 |
| EcoRII | CCWGG | 1 cut(s) | 328 |
| EcoT14I | CCWWGG | 1 cut(s) | 8 |
| ErhI | CCWWGG | 1 cut(s) | 8 |
| Esp3I | CGTCTC | 1 cut(s) | 1193 |
| FaeI | CATG | 4 cut(s) | 155, 550, 657, 760 |
| FaqI | GGGAC | 1 cut(s) | 510 |
| FatI | CATG | 4 cut(s) | 151, 546, 653, 756 |
| FblI | GTMKAC | 2 cut(s) | 910, 945 |
| Fnu4HI | GCNGC | 3 cut(s) | 422, 995, 998 |
| FokI | GGATG | 5 cut(s) | 25, 203, 602, 704, 969 |
| Fsp4HI | GCNGC | 3 cut(s) | 422, 995, 998 |
| FspBI | CTAG | 2 cut(s) | 59, 351 |
| GlaI | GCGC | 2 cut(s) | 113, 696 |
| GluI | GCNGC | 3 cut(s) | 422, 995, 998 |
| GsuI | CTGGAG | 2 cut(s) | 281, 404 |
| HapII | CCGG | 2 cut(s) | 537, 1111 |
| HhaI | GCGC | 2 cut(s) | 114, 697 |
| Hin1II | CATG | 4 cut(s) | 155, 550, 657, 760 |
| Hin6I | GCGC | 2 cut(s) | 112, 695 |
| HinP1I | GCGC | 2 cut(s) | 112, 695 |
| HincII | GTYRAC | 1 cut(s) | 946 |
| HindII | GTYRAC | 1 cut(s) | 946 |
| HindIII | AAGCTT | 3 cut(s) | 485, 506, 566 |
| HinfI | GANTC | 5 cut(s) | 367, 602, 815, 942, 974 |
| HpaII | CCGG | 2 cut(s) | 537, 1111 |
| HphI | GGTGA | 6 cut(s) | 86, 236, 289, 481, 913, 1060 |
| Hpy166II | GTNNAC | 3 cut(s) | 911, 946, 962 |
| Hpy188I | TCNGA | 4 cut(s) | 366, 516, 799, 1013 |
| Hpy8I | GTNNAC | 3 cut(s) | 911, 946, 962 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 4 cut(s) | 446, 776, 821, 1121 |
| HpyCH4III | ACNGT | 2 cut(s) | 896, 1031 |
| HpyCH4IV | ACGT | 1 cut(s) | 50 |
| HpyCH4V | TGCA | 4 cut(s) | 151, 760, 873, 901 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 574, 694, 790 |
| HpyF3I | CTNAG | 2 cut(s) | 779, 843 |
| HpySE526I | ACGT | 1 cut(s) | 50 |
| Hsp92II | CATG | 4 cut(s) | 155, 550, 657, 760 |
| HspAI | GCGC | 2 cut(s) | 112, 695 |
| Kzo9I | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| Lsp1109I | GCAGC | 3 cut(s) | 433, 981, 984 |
| LweI | GCATC | 3 cut(s) | 151, 193, 682 |
| MaeI | CTAG | 2 cut(s) | 59, 351 |
| MaeII | ACGT | 1 cut(s) | 50 |
| MaeIII | GTNAC | 3 cut(s) | 224, 469, 532 |
| MalI | GATC | 6 cut(s) | 30, 128, 345, 449, 1015, 1164 |
| MboI | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| MboII | GAAGA | 5 cut(s) | 190, 353, 365, 491, 863 |
| MflI | RGATCY | 2 cut(s) | 28, 126 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MluCI | AATT | 7 cut(s) | 194, 394, 581, 610, 809, 854, 1089 |
| MluI | ACGCGT | 1 cut(s) | 866 |
| MlyI | GAGTC | 1 cut(s) | 951 |
| MmeI | TCCRAC | 3 cut(s) | 295, 318, 828 |
| MroXI | GAANNNNTTC | 2 cut(s) | 397, 819 |
| MseI | TTAA | 6 cut(s) | 41, 93, 459, 609, 1059, 1077 |
| MslI | CAYNNNNRTG | 1 cut(s) | 189 |
| MspI | CCGG | 2 cut(s) | 537, 1111 |
| MspR9I | CCNGG | 2 cut(s) | 330, 538 |
| MssI | GTTTAAAC | 1 cut(s) | 1060 |
| Mva1269I | GAATGC | 1 cut(s) | 542 |
| MvaI | CCWGG | 1 cut(s) | 330 |
| MvnI | CGCG | 3 cut(s) | 114, 868, 1095 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 574, 694, 790 |
| NciI | CCSGG | 1 cut(s) | 538 |
| NdeII | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| NlaIII | CATG | 4 cut(s) | 155, 550, 657, 760 |
| NlaIV | GGNNCC | 1 cut(s) | 481 |
| NmuCI | GTSAC | 2 cut(s) | 224, 469 |
| NruI | TCGCGA | 1 cut(s) | 1095 |
| NspI | RCATGY | 2 cut(s) | 155, 760 |
| NspV | TTCGAA | 2 cut(s) | 731, 1037 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 508, 1017 |
| PctI | GAATGC | 1 cut(s) | 542 |
| PdmI | GAANNNNTTC | 2 cut(s) | 397, 819 |
| PfeI | GAWTC | 4 cut(s) | 367, 602, 815, 974 |
| PkrI | GCNGC | 3 cut(s) | 423, 996, 999 |
| PleI | GAGTC | 1 cut(s) | 950 |
| PmeI | GTTTAAAC | 1 cut(s) | 1060 |
| PpsI | GAGTC | 1 cut(s) | 950 |
| Psp6I | CCWGG | 1 cut(s) | 328 |
| PspEI | GGTNACC | 1 cut(s) | 532 |
| PspGI | CCWGG | 1 cut(s) | 328 |
| PspN4I | GGNNCC | 1 cut(s) | 481 |
| PsuI | RGATCY | 2 cut(s) | 28, 126 |
| RruI | TCGCGA | 1 cut(s) | 1095 |
| RsaI | GTAC | 1 cut(s) | 49 |
| RsaNI | GTAC | 1 cut(s) | 48 |
| RseI | CAYNNNNRTG | 1 cut(s) | 189 |
| SalI | GTCGAC | 1 cut(s) | 944 |
| SaqAI | TTAA | 6 cut(s) | 41, 93, 459, 609, 1059, 1077 |
| SatI | GCNGC | 3 cut(s) | 422, 995, 998 |
| Sau3AI | GATC | 6 cut(s) | 28, 126, 343, 447, 1013, 1162 |
| SchI | GAGTC | 1 cut(s) | 951 |
| ScrFI | CCNGG | 2 cut(s) | 330, 538 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SfaNI | GCATC | 3 cut(s) | 151, 193, 682 |
| SfcI | CTRYAG | 2 cut(s) | 474, 1027 |
| SfuI | TTCGAA | 2 cut(s) | 731, 1037 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 189 |
| SmlI | CTYRAG | 2 cut(s) | 641, 937 |
| SmoI | CTYRAG | 2 cut(s) | 641, 937 |
| Sse9I | AATT | 7 cut(s) | 194, 394, 581, 610, 809, 854, 1089 |
| SsiI | CCGC | 2 cut(s) | 114, 390 |
| SspI | AATATT | 1 cut(s) | 145 |
| SspMI | CTAG | 2 cut(s) | 59, 351 |
| StyD4I | CCNGG | 2 cut(s) | 328, 536 |
| StyI | CCWWGG | 1 cut(s) | 8 |
| TaaI | ACNGT | 2 cut(s) | 896, 1031 |
| TaiI | ACGT | 1 cut(s) | 53 |
| TaqI | TCGA | 8 cut(s) | 87, 450, 579, 731, 945, 1020, 1037, 1161 |
| TasI | AATT | 7 cut(s) | 194, 394, 581, 610, 809, 854, 1089 |
| TfiI | GAWTC | 4 cut(s) | 367, 602, 815, 974 |
| Tru1I | TTAA | 6 cut(s) | 41, 93, 459, 609, 1059, 1077 |
| Tru9I | TTAA | 6 cut(s) | 41, 93, 459, 609, 1059, 1077 |
| TseFI | GTSAC | 2 cut(s) | 224, 469 |
| TseI | GCWGC | 3 cut(s) | 421, 994, 997 |
| Tsp45I | GTSAC | 2 cut(s) | 224, 469 |
| TspDTI | ATGAA | 4 cut(s) | 207, 535, 966, 1140 |
| XceI | RCATGY | 2 cut(s) | 155, 760 |
| XmiI | GTMKAC | 2 cut(s) | 910, 945 |
| XmnI | GAANNNNTTC | 2 cut(s) | 397, 819 |
| XspI | CTAG | 2 cut(s) | 59, 351 |