Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 39 |
| AccB1I | GGYRCC | 1 cut(s) | 195 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 95 |
| AciI | CCGC | 1 cut(s) | 411 |
| AcsI | RAATTY | 1 cut(s) | 386 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 95, 321, 356 |
| AflII | CTTAAG | 1 cut(s) | 365 |
| AgsI | TTSAA | 1 cut(s) | 289 |
| AjnI | CCWGG | 1 cut(s) | 198 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| ApoI | RAATTY | 1 cut(s) | 386 |
| AspLEI | GCGC | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 144, 177 |
| BanI | GGYRCC | 1 cut(s) | 195 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 3 cut(s) | 361, 374, 434 |
| BciT130I | CCWGG | 1 cut(s) | 200 |
| BfrI | CTTAAG | 1 cut(s) | 365 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| Bme1390I | CCNGG | 1 cut(s) | 200 |
| BmiI | GGNNCC | 1 cut(s) | 197 |
| BmrFI | CCNGG | 1 cut(s) | 200 |
| BmsI | GCATC | 1 cut(s) | 334 |
| BpmI | CTGGAG | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 2 cut(s) | 94, 338 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 95, 321, 356 |
| BseBI | CCWGG | 1 cut(s) | 200 |
| BseDI | CCNNGG | 2 cut(s) | 94, 338 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 95, 321, 356 |
| BseRI | GAGGAG | 2 cut(s) | 218, 339 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BshNI | GGYRCC | 1 cut(s) | 195 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 95, 321, 356 |
| Bsp143I | GATC | 1 cut(s) | 404 |
| BspACI | CCGC | 1 cut(s) | 411 |
| BspHI | TCATGA | 1 cut(s) | 304 |
| BspLI | GGNNCC | 1 cut(s) | 197 |
| BspT107I | GGYRCC | 1 cut(s) | 195 |
| BspTI | CTTAAG | 1 cut(s) | 365 |
| BssECI | CCNNGG | 2 cut(s) | 94, 338 |
| BssMI | GATC | 1 cut(s) | 404 |
| BssT1I | CCWWGG | 2 cut(s) | 94, 338 |
| Bst2UI | CCWGG | 1 cut(s) | 200 |
| Bst4CI | ACNGT | 1 cut(s) | 178 |
| BstAFI | CTTAAG | 1 cut(s) | 365 |
| BstHHI | GCGC | 1 cut(s) | 40 |
| BstKTI | GATC | 1 cut(s) | 407 |
| BstMBI | GATC | 1 cut(s) | 404 |
| BstNI | CCWGG | 1 cut(s) | 200 |
| BstSCI | CCNGG | 1 cut(s) | 198 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 18, 360 |
| CciI | TCATGA | 1 cut(s) | 304 |
| CfoI | GCGC | 1 cut(s) | 40 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 203, 238 |
| CviAII | CATG | 2 cut(s) | 305, 445 |
| CviJI | RGCY | 7 cut(s) | 35, 99, 150, 314, 337, 364, 455 |
| CviKI_1 | RGCY | 7 cut(s) | 35, 99, 150, 314, 337, 364, 455 |
| DpnI | GATC | 1 cut(s) | 406 |
| DpnII | GATC | 1 cut(s) | 404 |
| Eco130I | CCWWGG | 2 cut(s) | 94, 338 |
| EcoRII | CCWGG | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 2 cut(s) | 94, 338 |
| ErhI | CCWWGG | 2 cut(s) | 94, 338 |
| FaeI | CATG | 2 cut(s) | 308, 448 |
| FaiI | YATR | 8 cut(s) | 91, 153, 168, 191, 247, 306, 438, 446 |
| FatI | CATG | 2 cut(s) | 304, 444 |
| FauI | CCCGC | 1 cut(s) | 404 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| FspI | TGCGCA | 1 cut(s) | 39 |
| GlaI | GCGC | 1 cut(s) | 39 |
| GluI | GCNGC | 1 cut(s) | 36 |
| GsuI | CTGGAG | 1 cut(s) | 221 |
| HhaI | GCGC | 1 cut(s) | 40 |
| Hin1II | CATG | 2 cut(s) | 308, 448 |
| Hin6I | GCGC | 1 cut(s) | 38 |
| HinP1I | GCGC | 1 cut(s) | 38 |
| HinfI | GANTC | 1 cut(s) | 7 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 2 cut(s) | 263, 431 |
| Hpy188III | TCNNGA | 1 cut(s) | 305 |
| HpyAV | CCTTC | 1 cut(s) | 295 |
| HpyCH4III | ACNGT | 1 cut(s) | 178 |
| HpyCH4V | TGCA | 1 cut(s) | 67 |
| Hsp92II | CATG | 2 cut(s) | 308, 448 |
| HspAI | GCGC | 1 cut(s) | 38 |
| Kzo9I | GATC | 1 cut(s) | 404 |
| LmnI | GCTCC | 1 cut(s) | 205 |
| LpnPI | CCDG | 7 cut(s) | 185, 212, 213, 342, 393, 407, 441 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| LweI | GCATC | 1 cut(s) | 334 |
| MaeIII | GTNAC | 1 cut(s) | 111 |
| MalI | GATC | 1 cut(s) | 406 |
| MboI | GATC | 1 cut(s) | 404 |
| MluCI | AATT | 4 cut(s) | 48, 317, 386, 433 |
| MmeI | TCCRAC | 1 cut(s) | 286 |
| MnlI | CCTC | 5 cut(s) | 181, 196, 315, 357, 360 |
| MseI | TTAA | 5 cut(s) | 51, 57, 279, 333, 366 |
| MslI | CAYNNNNRTG | 1 cut(s) | 449 |
| MspCI | CTTAAG | 1 cut(s) | 365 |
| MspR9I | CCNGG | 1 cut(s) | 200 |
| MvaI | CCWGG | 1 cut(s) | 200 |
| NdeII | GATC | 1 cut(s) | 404 |
| NlaIII | CATG | 2 cut(s) | 308, 448 |
| NlaIV | GGNNCC | 1 cut(s) | 197 |
| NsbI | TGCGCA | 1 cut(s) | 39 |
| PagI | TCATGA | 1 cut(s) | 304 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 95 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| Psp6I | CCWGG | 1 cut(s) | 198 |
| PspGI | CCWGG | 1 cut(s) | 198 |
| PspN4I | GGNNCC | 1 cut(s) | 197 |
| RseI | CAYNNNNRTG | 1 cut(s) | 449 |
| SaqAI | TTAA | 5 cut(s) | 51, 57, 279, 333, 366 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 1 cut(s) | 404 |
| ScrFI | CCNGG | 1 cut(s) | 200 |
| SetI | ASST | 4 cut(s) | 63, 96, 173, 396 |
| SfaNI | GCATC | 1 cut(s) | 334 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 449 |
| SmlI | CTYRAG | 1 cut(s) | 365 |
| SmoI | CTYRAG | 1 cut(s) | 365 |
| Sse9I | AATT | 4 cut(s) | 48, 317, 386, 433 |
| SsiI | CCGC | 1 cut(s) | 411 |
| SspI | AATATT | 1 cut(s) | 376 |
| StyD4I | CCNGG | 1 cut(s) | 198 |
| StyI | CCWWGG | 2 cut(s) | 94, 338 |
| TaaI | ACNGT | 1 cut(s) | 178 |
| TaqI | TCGA | 1 cut(s) | 328 |
| TasI | AATT | 4 cut(s) | 48, 317, 386, 433 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| Tru1I | TTAA | 5 cut(s) | 51, 57, 279, 333, 366 |
| Tru9I | TTAA | 5 cut(s) | 51, 57, 279, 333, 366 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspDTI | ATGAA | 2 cut(s) | 293, 321 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 95 |
| Vha464I | CTTAAG | 1 cut(s) | 365 |
| XapI | RAATTY | 1 cut(s) | 386 |