zinc-binding in reverse transcriptase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 413 |
| AccB1I | GGYRCC | 1 cut(s) | 626 |
| AccBSI | CCGCTC | 1 cut(s) | 287 |
| AccII | CGCG | 3 cut(s) | 279, 348, 465 |
| AccIII | TCCGGA | 1 cut(s) | 231 |
| AciI | CCGC | 7 cut(s) | 277, 285, 346, 463, 710, 963, 994 |
| AclWI | GGATC | 1 cut(s) | 347 |
| AcoI | YGGCCR | 2 cut(s) | 102, 995 |
| AcuI | CTGAAG | 1 cut(s) | 59 |
| AfaI | GTAC | 2 cut(s) | 618, 685 |
| AjnI | CCWGG | 4 cut(s) | 45, 69, 330, 335 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 968, 1000 |
| Alw21I | GWGCWC | 4 cut(s) | 78, 138, 376, 813 |
| Alw26I | GTCTC | 4 cut(s) | 134, 162, 451, 711 |
| AlwI | GGATC | 1 cut(s) | 347 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 295, 1130 |
| Ama87I | CYCGRG | 5 cut(s) | 88, 131, 137, 165, 356 |
| Aor13HI | TCCGGA | 1 cut(s) | 231 |
| AoxI | GGCC | 5 cut(s) | 102, 333, 610, 757, 995 |
| ApeKI | GCWGC | 4 cut(s) | 575, 966, 1081, 1130 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 204, 236 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 516 |
| AspLEI | GCGC | 2 cut(s) | 281, 834 |
| AspS9I | GGNCC | 5 cut(s) | 43, 388, 439, 610, 897 |
| AsuHPI | GGTGA | 3 cut(s) | 1055, 1105, 1158 |
| AsuII | TTCGAA | 1 cut(s) | 530 |
| AvaI | CYCGRG | 5 cut(s) | 88, 131, 137, 165, 356 |
| AvaII | GGWCC | 4 cut(s) | 43, 388, 439, 897 |
| BanI | GGYRCC | 1 cut(s) | 626 |
| BanII | GRGCYC | 3 cut(s) | 78, 138, 376 |
| BauI | CACGAG | 1 cut(s) | 30 |
| BbsI | GAAGAC | 2 cut(s) | 12, 1155 |
| Bbv12I | GWGCWC | 4 cut(s) | 78, 138, 376, 813 |
| BbvCI | CCTCAGC | 2 cut(s) | 1052, 1146 |
| BbvI | GCAGC | 4 cut(s) | 562, 953, 1093, 1117 |
| BccI | CCATC | 1 cut(s) | 913 |
| BceAI | ACGGC | 2 cut(s) | 669, 982 |
| BciT130I | CCWGG | 4 cut(s) | 47, 71, 332, 337 |
| BclI | TGATCA | 1 cut(s) | 582 |
| BcoDI | GTCTC | 4 cut(s) | 134, 162, 451, 711 |
| BfmI | CTRYAG | 1 cut(s) | 967 |
| BisI | GCNGC | 7 cut(s) | 277, 576, 964, 967, 995, 1082, 1131 |
| BlpI | GCTNAGC | 1 cut(s) | 296 |
| BlsI | GCNGC | 7 cut(s) | 278, 577, 965, 968, 996, 1083, 1132 |
| BmcAI | AGTACT | 1 cut(s) | 618 |
| Bme1390I | CCNGG | 4 cut(s) | 47, 71, 332, 337 |
| Bme18I | GGWCC | 4 cut(s) | 43, 388, 439, 897 |
| BmeT110I | CYCGRG | 5 cut(s) | 88, 131, 137, 165, 356 |
| BmgT120I | GGNCC | 5 cut(s) | 43, 388, 439, 610, 897 |
| BmiI | GGNNCC | 2 cut(s) | 390, 628 |
| BmrFI | CCNGG | 4 cut(s) | 47, 71, 332, 337 |
| BmrI | ACTGGG | 1 cut(s) | 386 |
| BmsI | GCATC | 1 cut(s) | 1111 |
| BmuI | ACTGGG | 1 cut(s) | 386 |
| BpiI | GAAGAC | 2 cut(s) | 12, 1155 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 137, 169 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1052, 1146 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 296 |
| Bpu14I | TTCGAA | 1 cut(s) | 530 |
| BsaI | GGTCTC | 2 cut(s) | 134, 162 |
| BsaJI | CCNNGG | 2 cut(s) | 14, 69 |
| BsaWI | WCCGGW | 1 cut(s) | 231 |
| Bse118I | RCCGGY | 1 cut(s) | 308 |
| Bse1I | ACTGG | 1 cut(s) | 392 |
| Bse3DI | GCAATG | 1 cut(s) | 858 |
| BseAI | TCCGGA | 1 cut(s) | 231 |
| BseBI | CCWGG | 4 cut(s) | 47, 71, 332, 337 |
| BseDI | CCNNGG | 2 cut(s) | 14, 69 |
| BseGI | GGATG | 2 cut(s) | 604, 778 |
| BseMI | GCAATG | 1 cut(s) | 858 |
| BseMII | CTCAG | 5 cut(s) | 287, 302, 443, 1043, 1137 |
| BseNI | ACTGG | 1 cut(s) | 392 |
| BseRI | GAGGAG | 4 cut(s) | 119, 149, 956, 1081 |
| BseX3I | CGGCCG | 2 cut(s) | 102, 995 |
| BseXI | GCAGC | 4 cut(s) | 562, 953, 1093, 1117 |
| BsgI | GTGCAG | 1 cut(s) | 1049 |
| Bsh1236I | CGCG | 3 cut(s) | 279, 348, 465 |
| Bsh1285I | CGRYCG | 4 cut(s) | 105, 318, 346, 998 |
| BshFI | GGCC | 5 cut(s) | 104, 335, 612, 759, 997 |
| BshNI | GGYRCC | 1 cut(s) | 626 |
| BsiEI | CGRYCG | 4 cut(s) | 105, 318, 346, 998 |
| BsiHKAI | GWGCWC | 4 cut(s) | 78, 138, 376, 813 |
| BsiHKCI | CYCGRG | 5 cut(s) | 88, 131, 137, 165, 356 |
| BsiSI | CCGG | 2 cut(s) | 232, 309 |
| BslFI | GGGAC | 2 cut(s) | 78, 346 |
| BsmAI | GTCTC | 4 cut(s) | 134, 162, 451, 711 |
| BsmFI | GGGAC | 2 cut(s) | 78, 346 |
| BsnI | GGCC | 5 cut(s) | 104, 335, 612, 759, 997 |
| Bso31I | GGTCTC | 2 cut(s) | 134, 162 |
| BsoBI | CYCGRG | 5 cut(s) | 88, 131, 137, 165, 356 |
| Bsp119I | TTCGAA | 1 cut(s) | 530 |
| Bsp1286I | GDGCHC | 4 cut(s) | 78, 138, 376, 813 |
| Bsp13I | TCCGGA | 1 cut(s) | 231 |
| Bsp143I | GATC | 3 cut(s) | 315, 339, 582 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 296 |
| BspACI | CCGC | 7 cut(s) | 277, 285, 346, 463, 710, 963, 994 |
| BspANI | GGCC | 5 cut(s) | 104, 335, 612, 759, 997 |
| BspCNI | CTCAG | 5 cut(s) | 288, 301, 442, 1044, 1138 |
| BspEI | TCCGGA | 1 cut(s) | 231 |
| BspFNI | CGCG | 3 cut(s) | 279, 348, 465 |
| BspLI | GGNNCC | 2 cut(s) | 390, 628 |
| BspMAI | CTGCAG | 1 cut(s) | 971 |
| BspPI | GGATC | 1 cut(s) | 347 |
| BspT104I | TTCGAA | 1 cut(s) | 530 |
| BspT107I | GGYRCC | 1 cut(s) | 626 |
| BspTNI | GGTCTC | 2 cut(s) | 134, 162 |
| BsrBI | CCGCTC | 1 cut(s) | 287 |
| BsrDI | GCAATG | 1 cut(s) | 858 |
| BsrFI | RCCGGY | 1 cut(s) | 308 |
| BsrI | ACTGG | 1 cut(s) | 392 |
| BssAI | RCCGGY | 1 cut(s) | 308 |
| BssECI | CCNNGG | 2 cut(s) | 14, 69 |
| BssMI | GATC | 3 cut(s) | 315, 339, 582 |
| BssSI | CACGAG | 1 cut(s) | 30 |
| BssT1I | CCWWGG | 1 cut(s) | 14 |
| Bst2BI | CACGAG | 1 cut(s) | 30 |
| Bst2UI | CCWGG | 4 cut(s) | 47, 71, 332, 337 |
| Bst4CI | ACNGT | 1 cut(s) | 560 |
| Bst6I | CTCTTC | 1 cut(s) | 971 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1130 |
| BstBI | TTCGAA | 1 cut(s) | 530 |
| BstDEI | CTNAG | 6 cut(s) | 288, 296, 429, 1052, 1146, 1170 |
| BstF5I | GGATG | 2 cut(s) | 604, 778 |
| BstFNI | CGCG | 3 cut(s) | 279, 348, 465 |
| BstHHI | GCGC | 2 cut(s) | 281, 834 |
| BstKTI | GATC | 3 cut(s) | 318, 342, 585 |
| BstMAI | GTCTC | 4 cut(s) | 134, 162, 451, 711 |
| BstMBI | GATC | 3 cut(s) | 315, 339, 582 |
| BstMCI | CGRYCG | 4 cut(s) | 105, 318, 346, 998 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 122, 462, 575, 848, 1022, 1130 |
| BstNI | CCWGG | 4 cut(s) | 47, 71, 332, 337 |
| BstSCI | CCNGG | 4 cut(s) | 45, 69, 330, 335 |
| BstSFI | CTRYAG | 1 cut(s) | 967 |
| BstUI | CGCG | 3 cut(s) | 279, 348, 465 |
| BstV1I | GCAGC | 4 cut(s) | 562, 953, 1093, 1117 |
| BstV2I | GAAGAC | 2 cut(s) | 12, 1155 |
| BstZI | CGGCCG | 2 cut(s) | 102, 995 |
| BsuRI | GGCC | 5 cut(s) | 104, 335, 612, 759, 997 |
| BtsCI | GGATG | 2 cut(s) | 604, 778 |
| BtsIMutI | CAGTG | 1 cut(s) | 556 |
| CaiI | CAGNNNCTG | 2 cut(s) | 295, 1130 |
| CfoI | GCGC | 2 cut(s) | 281, 834 |
| Cfr10I | RCCGGY | 1 cut(s) | 308 |
| Cfr13I | GGNCC | 5 cut(s) | 43, 388, 439, 610, 897 |
| CseI | GACGC | 1 cut(s) | 857 |
| Csp6I | GTAC | 2 cut(s) | 617, 684 |
| CviAII | CATG | 1 cut(s) | 793 |
| CviQI | GTAC | 2 cut(s) | 617, 684 |
| DdeI | CTNAG | 6 cut(s) | 288, 296, 429, 1052, 1146, 1170 |
| DpnI | GATC | 3 cut(s) | 317, 341, 584 |
| DpnII | GATC | 3 cut(s) | 315, 339, 582 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 413 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 413 |
| EaeI | YGGCCR | 2 cut(s) | 102, 995 |
| EagI | CGGCCG | 2 cut(s) | 102, 995 |
| Eam1104I | CTCTTC | 1 cut(s) | 971 |
| EarI | CTCTTC | 1 cut(s) | 971 |
| Ecl136II | GAGCTC | 3 cut(s) | 76, 136, 374 |
| EclXI | CGGCCG | 2 cut(s) | 102, 995 |
| Eco130I | CCWWGG | 1 cut(s) | 14 |
| Eco147I | AGGCCT | 2 cut(s) | 335, 759 |
| Eco24I | GRGCYC | 3 cut(s) | 78, 138, 376 |
| Eco31I | GGTCTC | 2 cut(s) | 134, 162 |
| Eco47I | GGWCC | 4 cut(s) | 43, 388, 439, 897 |
| Eco52I | CGGCCG | 2 cut(s) | 102, 995 |
| Eco53kI | GAGCTC | 3 cut(s) | 76, 136, 374 |
| Eco57I | CTGAAG | 1 cut(s) | 59 |
| Eco88I | CYCGRG | 5 cut(s) | 88, 131, 137, 165, 356 |
| EcoICRI | GAGCTC | 3 cut(s) | 76, 136, 374 |
| EcoO109I | RGGNCCY | 2 cut(s) | 43, 388 |
| EcoRII | CCWGG | 4 cut(s) | 45, 69, 330, 335 |
| EcoT14I | CCWWGG | 1 cut(s) | 14 |
| EcoT38I | GRGCYC | 3 cut(s) | 78, 138, 376 |
| ErhI | CCWWGG | 1 cut(s) | 14 |
| FaeI | CATG | 1 cut(s) | 796 |
| FaiI | YATR | 6 cut(s) | 257, 572, 682, 755, 794, 936 |
| FaqI | GGGAC | 2 cut(s) | 78, 346 |
| FatI | CATG | 1 cut(s) | 792 |
| FbaI | TGATCA | 1 cut(s) | 582 |
| Fnu4HI | GCNGC | 7 cut(s) | 277, 576, 964, 967, 995, 1082, 1131 |
| FokI | GGATG | 2 cut(s) | 611, 785 |
| FriOI | GRGCYC | 3 cut(s) | 78, 138, 376 |
| Fsp4HI | GCNGC | 7 cut(s) | 277, 576, 964, 967, 995, 1082, 1131 |
| GlaI | GCGC | 2 cut(s) | 280, 833 |
| GluI | GCNGC | 7 cut(s) | 277, 576, 964, 967, 995, 1082, 1131 |
| HaeIII | GGCC | 5 cut(s) | 104, 335, 612, 759, 997 |
| HapII | CCGG | 2 cut(s) | 232, 309 |
| HgaI | GACGC | 1 cut(s) | 857 |
| HhaI | GCGC | 2 cut(s) | 281, 834 |
| Hin1II | CATG | 1 cut(s) | 796 |
| Hin6I | GCGC | 2 cut(s) | 279, 832 |
| HinP1I | GCGC | 2 cut(s) | 279, 832 |
| HincII | GTYRAC | 2 cut(s) | 397, 648 |
| HindII | GTYRAC | 2 cut(s) | 397, 648 |
| HindIII | AAGCTT | 2 cut(s) | 639, 878 |
| HpaI | GTTAAC | 1 cut(s) | 648 |
| HpaII | CCGG | 2 cut(s) | 232, 309 |
| HphI | GGTGA | 3 cut(s) | 1055, 1105, 1158 |
| Hpy166II | GTNNAC | 2 cut(s) | 397, 648 |
| Hpy188I | TCNGA | 8 cut(s) | 151, 270, 325, 378, 695, 741, 901, 1120 |
| Hpy188III | TCNNGA | 5 cut(s) | 37, 95, 139, 165, 232 |
| Hpy8I | GTNNAC | 2 cut(s) | 397, 648 |
| Hpy99I | CGWCG | 1 cut(s) | 224 |
| HpyAV | CCTTC | 4 cut(s) | 34, 742, 857, 941 |
| HpyCH4III | ACNGT | 1 cut(s) | 560 |
| HpyCH4V | TGCA | 4 cut(s) | 472, 969, 1030, 1124 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 122, 462, 575, 848, 1022, 1130 |
| HpyF3I | CTNAG | 6 cut(s) | 288, 296, 429, 1052, 1146, 1170 |
| Hsp92II | CATG | 1 cut(s) | 796 |
| HspAI | GCGC | 2 cut(s) | 279, 832 |
| Kpn2I | TCCGGA | 1 cut(s) | 231 |
| Ksp22I | TGATCA | 1 cut(s) | 582 |
| KspAI | GTTAAC | 1 cut(s) | 648 |
| Kzo9I | GATC | 3 cut(s) | 315, 339, 582 |
| LmnI | GCTCC | 3 cut(s) | 73, 81, 162 |
| Lsp1109I | GCAGC | 4 cut(s) | 562, 953, 1093, 1117 |
| LweI | GCATC | 1 cut(s) | 1111 |
| MaeIII | GTNAC | 2 cut(s) | 821, 888 |
| MalI | GATC | 3 cut(s) | 317, 341, 584 |
| MbiI | CCGCTC | 1 cut(s) | 287 |
| MboI | GATC | 3 cut(s) | 315, 339, 582 |
| MboII | GAAGA | 3 cut(s) | 17, 988, 1155 |
| MhlI | GDGCHC | 4 cut(s) | 78, 138, 376, 813 |
| MluCI | AATT | 2 cut(s) | 766, 816 |
| MmeI | TCCRAC | 6 cut(s) | 135, 174, 303, 837, 966, 1014 |
| MroI | TCCGGA | 1 cut(s) | 231 |
| MroXI | GAANNNNTTC | 1 cut(s) | 516 |
| MseI | TTAA | 4 cut(s) | 120, 647, 702, 732 |
| MslI | CAYNNNNRTG | 1 cut(s) | 782 |
| MspI | CCGG | 2 cut(s) | 232, 309 |
| MspR9I | CCNGG | 4 cut(s) | 47, 71, 332, 337 |
| MvaI | CCWGG | 4 cut(s) | 47, 71, 332, 337 |
| MvnI | CGCG | 3 cut(s) | 279, 348, 465 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 122, 462, 575, 848, 1022, 1130 |
| NdeII | GATC | 3 cut(s) | 315, 339, 582 |
| NlaIII | CATG | 1 cut(s) | 796 |
| NlaIV | GGNNCC | 2 cut(s) | 390, 628 |
| NmeAIII | GCCGAG | 2 cut(s) | 80, 130 |
| NspV | TTCGAA | 1 cut(s) | 530 |
| PaeR7I | CTCGAG | 3 cut(s) | 131, 137, 356 |
| PceI | AGGCCT | 2 cut(s) | 335, 759 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 129 |
| PdmI | GAANNNNTTC | 1 cut(s) | 516 |
| PfeI | GAWTC | 2 cut(s) | 512, 527 |
| PflFI | GACNNNGTC | 2 cut(s) | 145, 443 |
| PfoI | TCCNGGA | 1 cut(s) | 45 |
| PkrI | GCNGC | 7 cut(s) | 278, 577, 965, 968, 996, 1083, 1132 |
| Ple19I | CGATCG | 1 cut(s) | 318 |
| PpuMI | RGGWCCY | 2 cut(s) | 43, 388 |
| Psp124BI | GAGCTC | 3 cut(s) | 78, 138, 376 |
| Psp5II | RGGWCCY | 2 cut(s) | 43, 388 |
| Psp6I | CCWGG | 4 cut(s) | 45, 69, 330, 335 |
| PspGI | CCWGG | 4 cut(s) | 45, 69, 330, 335 |
| PspN4I | GGNNCC | 2 cut(s) | 390, 628 |
| PspPI | GGNCC | 5 cut(s) | 43, 388, 439, 610, 897 |
| PspPPI | RGGWCCY | 2 cut(s) | 43, 388 |
| PspXI | VCTCGAGB | 2 cut(s) | 131, 356 |
| PstI | CTGCAG | 1 cut(s) | 971 |
| PstNI | CAGNNNCTG | 2 cut(s) | 295, 1130 |
| PsyI | GACNNNGTC | 2 cut(s) | 145, 443 |
| PvuI | CGATCG | 1 cut(s) | 318 |
| RsaI | GTAC | 2 cut(s) | 618, 685 |
| RsaNI | GTAC | 2 cut(s) | 617, 684 |
| RseI | CAYNNNNRTG | 1 cut(s) | 782 |
| SacI | GAGCTC | 3 cut(s) | 78, 138, 376 |
| SaqAI | TTAA | 4 cut(s) | 120, 647, 702, 732 |
| SatI | GCNGC | 7 cut(s) | 277, 576, 964, 967, 995, 1082, 1131 |
| Sau3AI | GATC | 3 cut(s) | 315, 339, 582 |
| Sau96I | GGNCC | 5 cut(s) | 43, 388, 439, 610, 897 |
| ScaI | AGTACT | 1 cut(s) | 618 |
| ScrFI | CCNGG | 4 cut(s) | 47, 71, 332, 337 |
| SduI | GDGCHC | 4 cut(s) | 78, 138, 376, 813 |
| SfaNI | GCATC | 1 cut(s) | 1111 |
| SfcI | CTRYAG | 1 cut(s) | 967 |
| Sfr274I | CTCGAG | 3 cut(s) | 131, 137, 356 |
| SfuI | TTCGAA | 1 cut(s) | 530 |
| SinI | GGWCC | 4 cut(s) | 43, 388, 439, 897 |
| SlaI | CTCGAG | 3 cut(s) | 131, 137, 356 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 782 |
| SmlI | CTYRAG | 3 cut(s) | 131, 137, 356 |
| SmoI | CTYRAG | 3 cut(s) | 131, 137, 356 |
| Sse9I | AATT | 2 cut(s) | 766, 816 |
| SseBI | AGGCCT | 2 cut(s) | 335, 759 |
| SsiI | CCGC | 7 cut(s) | 277, 285, 346, 463, 710, 963, 994 |
| SstI | GAGCTC | 3 cut(s) | 78, 138, 376 |
| StuI | AGGCCT | 2 cut(s) | 335, 759 |
| StyD4I | CCNGG | 4 cut(s) | 45, 69, 330, 335 |
| StyI | CCWWGG | 1 cut(s) | 14 |
| TaaI | ACNGT | 1 cut(s) | 560 |
| TaqII | GACCGA | 2 cut(s) | 158, 456 |
| TasI | AATT | 2 cut(s) | 766, 816 |
| TatI | WGTACW | 2 cut(s) | 616, 683 |
| TauI | GCSGC | 3 cut(s) | 279, 966, 997 |
| TfiI | GAWTC | 2 cut(s) | 512, 527 |
| Tru1I | TTAA | 4 cut(s) | 120, 647, 702, 732 |
| Tru9I | TTAA | 4 cut(s) | 120, 647, 702, 732 |
| TscAI | CASTG | 1 cut(s) | 563 |
| TseI | GCWGC | 4 cut(s) | 575, 966, 1081, 1130 |
| TspRI | CASTG | 1 cut(s) | 563 |
| Tth111I | GACNNNGTC | 2 cut(s) | 145, 443 |
| VpaK11BI | GGWCC | 4 cut(s) | 43, 388, 439, 897 |
| XhoI | CTCGAG | 3 cut(s) | 131, 137, 356 |
| XmnI | GAANNNNTTC | 1 cut(s) | 516 |
| ZrmI | AGTACT | 1 cut(s) | 618 |