zinc-binding in reverse transcriptase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 315 |
| AclWI | GGATC | 2 cut(s) | 509, 522 |
| AcsI | RAATTY | 1 cut(s) | 278 |
| AcuI | CTGAAG | 1 cut(s) | 426 |
| AfaI | GTAC | 1 cut(s) | 558 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 315 |
| AgsI | TTSAA | 4 cut(s) | 278, 424, 631, 719 |
| AjnI | CCWGG | 2 cut(s) | 128, 413 |
| AluBI | AGCT | 2 cut(s) | 167, 455 |
| AluI | AGCT | 2 cut(s) | 167, 455 |
| Alw21I | GWGCWC | 1 cut(s) | 668 |
| AlwI | GGATC | 2 cut(s) | 509, 522 |
| AoxI | GGCC | 4 cut(s) | 147, 495, 537, 549 |
| ApoI | RAATTY | 1 cut(s) | 278 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 357, 434 |
| AspS9I | GGNCC | 1 cut(s) | 537 |
| AsuC2I | CCSGG | 1 cut(s) | 561 |
| AsuHPI | GGTGA | 1 cut(s) | 122 |
| AsuII | TTCGAA | 1 cut(s) | 94 |
| BaeGI | GKGCMC | 1 cut(s) | 198 |
| BamHI | GGATCC | 1 cut(s) | 514 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 42, 74 |
| BbsI | GAAGAC | 2 cut(s) | 50, 687 |
| Bbv12I | GWGCWC | 1 cut(s) | 668 |
| BccI | CCATC | 4 cut(s) | 12, 185, 238, 313 |
| BciT130I | CCWGG | 2 cut(s) | 130, 415 |
| BciVI | GTATCC | 1 cut(s) | 316 |
| BcnI | CCSGG | 1 cut(s) | 561 |
| BfaI | CTAG | 4 cut(s) | 47, 468, 612, 713 |
| BfuI | GTATCC | 1 cut(s) | 316 |
| BlpI | GCTNAGC | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 3 cut(s) | 130, 415, 561 |
| BmgT120I | GGNCC | 1 cut(s) | 537 |
| BmiI | GGNNCC | 2 cut(s) | 324, 516 |
| BmrFI | CCNGG | 3 cut(s) | 130, 415, 561 |
| BmsI | GCATC | 1 cut(s) | 626 |
| BpiI | GAAGAC | 2 cut(s) | 50, 687 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 364, 396 |
| BpmI | CTGGAG | 3 cut(s) | 151, 189, 528 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 9 |
| Bpu14I | TTCGAA | 1 cut(s) | 94 |
| BpuEI | CTTGAG | 2 cut(s) | 47, 246 |
| BpuMI | CCSGG | 1 cut(s) | 561 |
| BsaJI | CCNNGG | 1 cut(s) | 674 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 315 |
| Bse118I | RCCGGY | 1 cut(s) | 325 |
| BseBI | CCWGG | 2 cut(s) | 130, 415 |
| BseDI | CCNNGG | 1 cut(s) | 674 |
| BseGI | GGATG | 3 cut(s) | 23, 196, 324 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 315 |
| BseMII | CTCAG | 1 cut(s) | 397 |
| BseSI | GKGCMC | 1 cut(s) | 198 |
| BshFI | GGCC | 4 cut(s) | 149, 497, 539, 551 |
| BsiHKAI | GWGCWC | 1 cut(s) | 668 |
| BsiSI | CCGG | 2 cut(s) | 326, 560 |
| BslFI | GGGAC | 1 cut(s) | 702 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 315 |
| BsmFI | GGGAC | 1 cut(s) | 702 |
| BsmI | GAATGC | 1 cut(s) | 375 |
| BsnI | GGCC | 4 cut(s) | 149, 497, 539, 551 |
| Bsp119I | TTCGAA | 1 cut(s) | 94 |
| Bsp1286I | GDGCHC | 2 cut(s) | 198, 668 |
| Bsp143I | GATC | 2 cut(s) | 289, 514 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 9 |
| BspANI | GGCC | 4 cut(s) | 149, 497, 539, 551 |
| BspCNI | CTCAG | 1 cut(s) | 396 |
| BspLI | GGNNCC | 2 cut(s) | 324, 516 |
| BspPI | GGATC | 2 cut(s) | 509, 522 |
| BspT104I | TTCGAA | 1 cut(s) | 94 |
| BsrFI | RCCGGY | 1 cut(s) | 325 |
| BssAI | RCCGGY | 1 cut(s) | 325 |
| BssECI | CCNNGG | 1 cut(s) | 674 |
| BssMI | GATC | 2 cut(s) | 289, 514 |
| BssT1I | CCWWGG | 1 cut(s) | 674 |
| Bst2UI | CCWGG | 2 cut(s) | 130, 415 |
| Bst4CI | ACNGT | 2 cut(s) | 531, 589 |
| Bst6I | CTCTTC | 1 cut(s) | 445 |
| BstBI | TTCGAA | 1 cut(s) | 94 |
| BstC8I | GCNNGC | 2 cut(s) | 327, 336 |
| BstDEI | CTNAG | 2 cut(s) | 9, 383 |
| BstF5I | GGATG | 3 cut(s) | 23, 196, 324 |
| BstKTI | GATC | 2 cut(s) | 292, 517 |
| BstMBI | GATC | 2 cut(s) | 289, 514 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 19, 331, 335, 623 |
| BstNI | CCWGG | 2 cut(s) | 130, 415 |
| BstNSI | RCATGY | 2 cut(s) | 338, 342 |
| BstSCI | CCNGG | 3 cut(s) | 128, 413, 559 |
| BstSLI | GKGCMC | 1 cut(s) | 198 |
| BstV2I | GAAGAC | 2 cut(s) | 50, 687 |
| BstX2I | RGATCY | 1 cut(s) | 514 |
| BstYI | RGATCY | 1 cut(s) | 514 |
| BsuI | GTATCC | 1 cut(s) | 316 |
| BsuRI | GGCC | 4 cut(s) | 149, 497, 539, 551 |
| BtsCI | GGATG | 3 cut(s) | 23, 196, 324 |
| BtsIMutI | CAGTG | 1 cut(s) | 527 |
| Cac8I | GCNNGC | 2 cut(s) | 327, 336 |
| Cfr10I | RCCGGY | 1 cut(s) | 325 |
| Cfr13I | GGNCC | 1 cut(s) | 537 |
| Csp6I | GTAC | 1 cut(s) | 557 |
| CviAII | CATG | 5 cut(s) | 215, 335, 339, 685, 692 |
| CviQI | GTAC | 1 cut(s) | 557 |
| DdeI | CTNAG | 2 cut(s) | 9, 383 |
| DpnI | GATC | 2 cut(s) | 291, 516 |
| DpnII | GATC | 2 cut(s) | 289, 514 |
| Eam1104I | CTCTTC | 1 cut(s) | 445 |
| EarI | CTCTTC | 1 cut(s) | 445 |
| Eco130I | CCWWGG | 1 cut(s) | 674 |
| Eco57I | CTGAAG | 1 cut(s) | 426 |
| EcoO109I | RGGNCCY | 1 cut(s) | 537 |
| EcoRII | CCWGG | 2 cut(s) | 128, 413 |
| EcoT14I | CCWWGG | 1 cut(s) | 674 |
| EcoT22I | ATGCAT | 1 cut(s) | 340 |
| ErhI | CCWWGG | 1 cut(s) | 674 |
| FaeI | CATG | 5 cut(s) | 218, 338, 342, 688, 695 |
| FaqI | GGGAC | 1 cut(s) | 702 |
| FatI | CATG | 5 cut(s) | 214, 334, 338, 684, 691 |
| FokI | GGATG | 3 cut(s) | 30, 203, 331 |
| FspBI | CTAG | 4 cut(s) | 47, 468, 612, 713 |
| GsuI | CTGGAG | 3 cut(s) | 151, 189, 528 |
| HaeIII | GGCC | 4 cut(s) | 149, 497, 539, 551 |
| HapII | CCGG | 2 cut(s) | 326, 560 |
| Hin1II | CATG | 5 cut(s) | 218, 338, 342, 688, 695 |
| HincII | GTYRAC | 1 cut(s) | 205 |
| HindII | GTYRAC | 1 cut(s) | 205 |
| HinfI | GANTC | 1 cut(s) | 226 |
| HpaI | GTTAAC | 1 cut(s) | 205 |
| HpaII | CCGG | 2 cut(s) | 326, 560 |
| HphI | GGTGA | 1 cut(s) | 122 |
| Hpy166II | GTNNAC | 2 cut(s) | 205, 585 |
| Hpy188I | TCNGA | 2 cut(s) | 289, 294 |
| Hpy188III | TCNNGA | 2 cut(s) | 350, 507 |
| Hpy8I | GTNNAC | 2 cut(s) | 205, 585 |
| HpyAV | CCTTC | 6 cut(s) | 129, 249, 387, 424, 541, 635 |
| HpyCH4III | ACNGT | 2 cut(s) | 531, 589 |
| HpyCH4IV | ACGT | 1 cut(s) | 405 |
| HpyCH4V | TGCA | 2 cut(s) | 334, 338 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 19, 331, 335, 623 |
| HpyF3I | CTNAG | 2 cut(s) | 9, 383 |
| HpySE526I | ACGT | 1 cut(s) | 405 |
| Hsp92II | CATG | 5 cut(s) | 218, 338, 342, 688, 695 |
| KroI | GCCGGC | 1 cut(s) | 325 |
| KroNI | GCCGGC | 1 cut(s) | 327 |
| KspAI | GTTAAC | 1 cut(s) | 205 |
| Kzo9I | GATC | 2 cut(s) | 289, 514 |
| LmnI | GCTCC | 1 cut(s) | 322 |
| LweI | GCATC | 1 cut(s) | 626 |
| MaeI | CTAG | 4 cut(s) | 47, 468, 612, 713 |
| MaeII | ACGT | 1 cut(s) | 405 |
| MalI | GATC | 2 cut(s) | 291, 516 |
| MboI | GATC | 2 cut(s) | 289, 514 |
| MboII | GAAGA | 4 cut(s) | 50, 402, 432, 692 |
| MflI | RGATCY | 1 cut(s) | 514 |
| MhlI | GDGCHC | 2 cut(s) | 198, 668 |
| MluCI | AATT | 4 cut(s) | 88, 183, 278, 354 |
| MmeI | TCCRAC | 1 cut(s) | 57 |
| MnlI | CCTC | 9 cut(s) | 139, 211, 270, 357, 390, 503, 508, 528, 720 |
| Mph1103I | ATGCAT | 1 cut(s) | 340 |
| MroNI | GCCGGC | 1 cut(s) | 325 |
| MroXI | GAANNNNTTC | 2 cut(s) | 357, 434 |
| MseI | TTAA | 2 cut(s) | 204, 363 |
| MspI | CCGG | 2 cut(s) | 326, 560 |
| MspR9I | CCNGG | 3 cut(s) | 130, 415, 561 |
| Mva1269I | GAATGC | 1 cut(s) | 375 |
| MvaI | CCWGG | 2 cut(s) | 130, 415 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 19, 331, 335, 623 |
| NaeI | GCCGGC | 1 cut(s) | 327 |
| NciI | CCSGG | 1 cut(s) | 561 |
| NdeII | GATC | 2 cut(s) | 289, 514 |
| NgoMIV | GCCGGC | 1 cut(s) | 325 |
| NlaIII | CATG | 5 cut(s) | 218, 338, 342, 688, 695 |
| NlaIV | GGNNCC | 2 cut(s) | 324, 516 |
| NsiI | ATGCAT | 1 cut(s) | 340 |
| NspI | RCATGY | 2 cut(s) | 338, 342 |
| NspV | TTCGAA | 1 cut(s) | 94 |
| PaeI | GCATGC | 1 cut(s) | 338 |
| PctI | GAATGC | 1 cut(s) | 375 |
| PdiI | GCCGGC | 1 cut(s) | 327 |
| PdmI | GAANNNNTTC | 2 cut(s) | 357, 434 |
| PfeI | GAWTC | 1 cut(s) | 226 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 315 |
| Psp6I | CCWGG | 2 cut(s) | 128, 413 |
| PspGI | CCWGG | 2 cut(s) | 128, 413 |
| PspN4I | GGNNCC | 2 cut(s) | 324, 516 |
| PspPI | GGNCC | 1 cut(s) | 537 |
| PsuI | RGATCY | 1 cut(s) | 514 |
| RsaI | GTAC | 1 cut(s) | 558 |
| RsaNI | GTAC | 1 cut(s) | 557 |
| SaqAI | TTAA | 2 cut(s) | 204, 363 |
| Sau3AI | GATC | 2 cut(s) | 289, 514 |
| Sau96I | GGNCC | 1 cut(s) | 537 |
| ScrFI | CCNGG | 3 cut(s) | 130, 415, 561 |
| SduI | GDGCHC | 2 cut(s) | 198, 668 |
| SetI | ASST | 7 cut(s) | 121, 169, 204, 262, 408, 416, 457 |
| SfaNI | GCATC | 1 cut(s) | 626 |
| SfuI | TTCGAA | 1 cut(s) | 94 |
| SmlI | CTYRAG | 2 cut(s) | 62, 261 |
| SmoI | CTYRAG | 2 cut(s) | 62, 261 |
| SphI | GCATGC | 1 cut(s) | 338 |
| Sse9I | AATT | 4 cut(s) | 88, 183, 278, 354 |
| SspMI | CTAG | 4 cut(s) | 47, 468, 612, 713 |
| StyD4I | CCNGG | 3 cut(s) | 128, 413, 559 |
| StyI | CCWWGG | 1 cut(s) | 674 |
| TaaI | ACNGT | 2 cut(s) | 531, 589 |
| TaiI | ACGT | 1 cut(s) | 408 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 4 cut(s) | 88, 183, 278, 354 |
| TfiI | GAWTC | 1 cut(s) | 226 |
| Tru1I | TTAA | 2 cut(s) | 204, 363 |
| Tru9I | TTAA | 2 cut(s) | 204, 363 |
| TscAI | CASTG | 1 cut(s) | 534 |
| TspDTI | ATGAA | 1 cut(s) | 654 |
| TspRI | CASTG | 1 cut(s) | 534 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 315 |
| XapI | RAATTY | 1 cut(s) | 278 |
| XceI | RCATGY | 2 cut(s) | 338, 342 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 316 |
| XmnI | GAANNNNTTC | 2 cut(s) | 357, 434 |
| XspI | CTAG | 4 cut(s) | 47, 468, 612, 713 |
| Zsp2I | ATGCAT | 1 cut(s) | 340 |