ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 938 |
| AciI | CCGC | 1 cut(s) | 677 |
| AclI | AACGTT | 1 cut(s) | 357 |
| AclWI | GGATC | 2 cut(s) | 590, 599 |
| AcsI | RAATTY | 4 cut(s) | 32, 235, 348, 411 |
| AfaI | GTAC | 4 cut(s) | 112, 157, 387, 610 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 316, 943 |
| AgsI | TTSAA | 7 cut(s) | 25, 41, 286, 496, 634, 782, 884 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 637, 669 |
| AluBI | AGCT | 3 cut(s) | 244, 727, 878 |
| AluI | AGCT | 3 cut(s) | 244, 727, 878 |
| Alw26I | GTCTC | 3 cut(s) | 226, 480, 835 |
| AlwI | GGATC | 2 cut(s) | 590, 599 |
| ApeKI | GCWGC | 1 cut(s) | 427 |
| ApoI | RAATTY | 4 cut(s) | 32, 235, 348, 411 |
| AseI | ATTAAT | 2 cut(s) | 660, 962 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 879 |
| AspS9I | GGNCC | 1 cut(s) | 933 |
| AsuHPI | GGTGA | 4 cut(s) | 88, 321, 650, 820 |
| AvaII | GGWCC | 1 cut(s) | 933 |
| AxyI | CCTNAGG | 1 cut(s) | 213 |
| BanII | GRGCYC | 1 cut(s) | 652 |
| BbvI | GCAGC | 1 cut(s) | 414 |
| BccI | CCATC | 5 cut(s) | 8, 92, 566, 701, 915 |
| BcoDI | GTCTC | 3 cut(s) | 226, 480, 835 |
| BfaI | CTAG | 2 cut(s) | 249, 468 |
| BfuAI | ACCTGC | 1 cut(s) | 938 |
| BisI | GCNGC | 1 cut(s) | 428 |
| BlsI | GCNGC | 1 cut(s) | 429 |
| Bme18I | GGWCC | 1 cut(s) | 933 |
| BmgT120I | GGNCC | 1 cut(s) | 933 |
| BmiI | GGNNCC | 1 cut(s) | 935 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 723, 755 |
| BpmI | CTGGAG | 1 cut(s) | 563 |
| BpuEI | CTTGAG | 1 cut(s) | 462 |
| BsaI | GGTCTC | 1 cut(s) | 480 |
| BsaJI | CCNNGG | 2 cut(s) | 311, 644 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 316, 943 |
| Bse1I | ACTGG | 1 cut(s) | 593 |
| Bse21I | CCTNAGG | 1 cut(s) | 213 |
| BseDI | CCNNGG | 2 cut(s) | 311, 644 |
| BseGI | GGATG | 6 cut(s) | 124, 376, 385, 685, 802, 926 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 316, 943 |
| BseMII | CTCAG | 2 cut(s) | 227, 719 |
| BseNI | ACTGG | 1 cut(s) | 593 |
| BseRI | GAGGAG | 1 cut(s) | 731 |
| BseXI | GCAGC | 1 cut(s) | 414 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 316, 943 |
| BsmAI | GTCTC | 3 cut(s) | 226, 480, 835 |
| Bso31I | GGTCTC | 1 cut(s) | 480 |
| Bsp1286I | GDGCHC | 1 cut(s) | 652 |
| Bsp1407I | TGTACA | 1 cut(s) | 110 |
| Bsp143I | GATC | 2 cut(s) | 582, 591 |
| BspACI | CCGC | 1 cut(s) | 677 |
| BspCNI | CTCAG | 2 cut(s) | 226, 720 |
| BspLI | GGNNCC | 1 cut(s) | 935 |
| BspMI | ACCTGC | 1 cut(s) | 938 |
| BspPI | GGATC | 2 cut(s) | 590, 599 |
| BspTNI | GGTCTC | 1 cut(s) | 480 |
| BsrGI | TGTACA | 1 cut(s) | 110 |
| BsrI | ACTGG | 1 cut(s) | 593 |
| BssECI | CCNNGG | 2 cut(s) | 311, 644 |
| BssMI | GATC | 2 cut(s) | 582, 591 |
| BssT1I | CCWWGG | 2 cut(s) | 311, 644 |
| Bst4CI | ACNGT | 2 cut(s) | 771, 973 |
| Bst6I | CTCTTC | 3 cut(s) | 212, 229, 258 |
| BstAUI | TGTACA | 1 cut(s) | 110 |
| BstC8I | GCNNGC | 2 cut(s) | 52, 432 |
| BstDEI | CTNAG | 5 cut(s) | 213, 240, 728, 867, 938 |
| BstF5I | GGATG | 6 cut(s) | 124, 376, 385, 685, 802, 926 |
| BstKTI | GATC | 2 cut(s) | 585, 594 |
| BstMAI | GTCTC | 3 cut(s) | 226, 480, 835 |
| BstMBI | GATC | 2 cut(s) | 582, 591 |
| BstV1I | GCAGC | 1 cut(s) | 414 |
| Bsu36I | CCTNAGG | 1 cut(s) | 213 |
| BtsCI | GGATG | 6 cut(s) | 124, 376, 385, 685, 802, 926 |
| BveI | ACCTGC | 1 cut(s) | 938 |
| Cac8I | GCNNGC | 2 cut(s) | 52, 432 |
| Cfr13I | GGNCC | 1 cut(s) | 933 |
| CseI | GACGC | 1 cut(s) | 449 |
| Csp6I | GTAC | 4 cut(s) | 111, 156, 386, 609 |
| CviAII | CATG | 6 cut(s) | 232, 333, 505, 531, 595, 613 |
| CviQI | GTAC | 4 cut(s) | 111, 156, 386, 609 |
| DdeI | CTNAG | 5 cut(s) | 213, 240, 728, 867, 938 |
| DpnI | GATC | 2 cut(s) | 584, 593 |
| DpnII | GATC | 2 cut(s) | 582, 591 |
| DraI | TTTAAA | 1 cut(s) | 456 |
| Eam1104I | CTCTTC | 3 cut(s) | 212, 229, 258 |
| EarI | CTCTTC | 3 cut(s) | 212, 229, 258 |
| Eco130I | CCWWGG | 2 cut(s) | 311, 644 |
| Eco24I | GRGCYC | 1 cut(s) | 652 |
| Eco31I | GGTCTC | 1 cut(s) | 480 |
| Eco47I | GGWCC | 1 cut(s) | 933 |
| Eco81I | CCTNAGG | 1 cut(s) | 213 |
| EcoO109I | RGGNCCY | 1 cut(s) | 933 |
| EcoRI | GAATTC | 1 cut(s) | 235 |
| EcoT14I | CCWWGG | 2 cut(s) | 311, 644 |
| EcoT38I | GRGCYC | 1 cut(s) | 652 |
| ErhI | CCWWGG | 2 cut(s) | 311, 644 |
| FaeI | CATG | 6 cut(s) | 235, 336, 508, 534, 598, 616 |
| FatI | CATG | 6 cut(s) | 231, 332, 504, 530, 594, 612 |
| FauNDI | CATATG | 1 cut(s) | 517 |
| Fnu4HI | GCNGC | 1 cut(s) | 428 |
| FokI | GGATG | 6 cut(s) | 131, 383, 392, 692, 809, 933 |
| FriOI | GRGCYC | 1 cut(s) | 652 |
| Fsp4HI | GCNGC | 1 cut(s) | 428 |
| FspBI | CTAG | 2 cut(s) | 249, 468 |
| GluI | GCNGC | 1 cut(s) | 428 |
| GsuI | CTGGAG | 1 cut(s) | 563 |
| HgaI | GACGC | 1 cut(s) | 449 |
| Hin1II | CATG | 6 cut(s) | 235, 336, 508, 534, 598, 616 |
| HindIII | AAGCTT | 1 cut(s) | 876 |
| HinfI | GANTC | 1 cut(s) | 683 |
| HphI | GGTGA | 4 cut(s) | 88, 321, 650, 820 |
| Hpy166II | GTNNAC | 3 cut(s) | 111, 165, 641 |
| Hpy188I | TCNGA | 3 cut(s) | 229, 406, 796 |
| Hpy188III | TCNNGA | 1 cut(s) | 542 |
| Hpy8I | GTNNAC | 3 cut(s) | 111, 165, 641 |
| HpyAV | CCTTC | 5 cut(s) | 61, 309, 314, 694, 919 |
| HpyCH4III | ACNGT | 2 cut(s) | 771, 973 |
| HpyCH4IV | ACGT | 3 cut(s) | 46, 357, 388 |
| HpyCH4V | TGCA | 2 cut(s) | 54, 530 |
| HpyF3I | CTNAG | 5 cut(s) | 213, 240, 728, 867, 938 |
| HpySE526I | ACGT | 3 cut(s) | 46, 357, 388 |
| Hsp92II | CATG | 6 cut(s) | 235, 336, 508, 534, 598, 616 |
| Kzo9I | GATC | 2 cut(s) | 582, 591 |
| LpnPI | CCDG | 6 cut(s) | 200, 302, 527, 574, 747, 933 |
| Lsp1109I | GCAGC | 1 cut(s) | 414 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeI | CTAG | 2 cut(s) | 249, 468 |
| MaeII | ACGT | 3 cut(s) | 46, 357, 388 |
| MalI | GATC | 2 cut(s) | 584, 593 |
| MboI | GATC | 2 cut(s) | 582, 591 |
| MboII | GAAGA | 5 cut(s) | 199, 216, 275, 508, 794 |
| MhlI | GDGCHC | 1 cut(s) | 652 |
| MluCI | AATT | 6 cut(s) | 32, 235, 348, 411, 449, 884 |
| MmeI | TCCRAC | 2 cut(s) | 123, 774 |
| MroXI | GAANNNNTTC | 1 cut(s) | 879 |
| MseI | TTAA | 5 cut(s) | 90, 455, 660, 962, 979 |
| MslI | CAYNNNNRTG | 1 cut(s) | 695 |
| NdeI | CATATG | 1 cut(s) | 517 |
| NdeII | GATC | 2 cut(s) | 582, 591 |
| NlaIII | CATG | 6 cut(s) | 235, 336, 508, 534, 598, 616 |
| NlaIV | GGNNCC | 1 cut(s) | 935 |
| PdmI | GAANNNNTTC | 1 cut(s) | 879 |
| PfeI | GAWTC | 1 cut(s) | 683 |
| PkrI | GCNGC | 1 cut(s) | 429 |
| PpuMI | RGGWCCY | 1 cut(s) | 933 |
| PshBI | ATTAAT | 2 cut(s) | 660, 962 |
| Psp1406I | AACGTT | 1 cut(s) | 357 |
| Psp5II | RGGWCCY | 1 cut(s) | 933 |
| PspN4I | GGNNCC | 1 cut(s) | 935 |
| PspPI | GGNCC | 1 cut(s) | 933 |
| PspPPI | RGGWCCY | 1 cut(s) | 933 |
| RsaI | GTAC | 4 cut(s) | 112, 157, 387, 610 |
| RsaNI | GTAC | 4 cut(s) | 111, 156, 386, 609 |
| RseI | CAYNNNNRTG | 1 cut(s) | 695 |
| SaqAI | TTAA | 5 cut(s) | 90, 455, 660, 962, 979 |
| SatI | GCNGC | 1 cut(s) | 428 |
| Sau3AI | GATC | 2 cut(s) | 582, 591 |
| Sau96I | GGNCC | 1 cut(s) | 933 |
| SduI | GDGCHC | 1 cut(s) | 652 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SinI | GGWCC | 1 cut(s) | 933 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 695 |
| SmlI | CTYRAG | 1 cut(s) | 477 |
| SmoI | CTYRAG | 1 cut(s) | 477 |
| Sse9I | AATT | 6 cut(s) | 32, 235, 348, 411, 449, 884 |
| SsiI | CCGC | 1 cut(s) | 677 |
| SspI | AATATT | 1 cut(s) | 187 |
| SspMI | CTAG | 2 cut(s) | 249, 468 |
| StyI | CCWWGG | 2 cut(s) | 311, 644 |
| TaaI | ACNGT | 2 cut(s) | 771, 973 |
| TaiI | ACGT | 3 cut(s) | 49, 360, 391 |
| TaqII | GACCGA | 1 cut(s) | 887 |
| TasI | AATT | 6 cut(s) | 32, 235, 348, 411, 449, 884 |
| TatI | WGTACW | 1 cut(s) | 110 |
| TfiI | GAWTC | 1 cut(s) | 683 |
| Tru1I | TTAA | 5 cut(s) | 90, 455, 660, 962, 979 |
| Tru9I | TTAA | 5 cut(s) | 90, 455, 660, 962, 979 |
| TseI | GCWGC | 1 cut(s) | 427 |
| TspDTI | ATGAA | 8 cut(s) | 248, 308, 616, 675, 679, 713, 765, 877 |
| TspGWI | ACGGA | 1 cut(s) | 908 |
| VpaK11BI | GGWCC | 1 cut(s) | 933 |
| VspI | ATTAAT | 2 cut(s) | 660, 962 |
| XapI | RAATTY | 4 cut(s) | 32, 235, 348, 411 |
| XmnI | GAANNNNTTC | 1 cut(s) | 879 |
| XspI | CTAG | 2 cut(s) | 249, 468 |