Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 32, 35 |
| AcuI | CTGAAG | 1 cut(s) | 71 |
| AfaI | GTAC | 3 cut(s) | 271, 277, 311 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 76, 259 |
| AflII | CTTAAG | 1 cut(s) | 112 |
| AgsI | TTSAA | 2 cut(s) | 20, 65 |
| AhlI | ACTAGT | 1 cut(s) | 272 |
| AjnI | CCWGG | 1 cut(s) | 243 |
| AluBI | AGCT | 1 cut(s) | 170 |
| AluI | AGCT | 1 cut(s) | 170 |
| Alw26I | GTCTC | 1 cut(s) | 347 |
| Ama87I | CYCGRG | 1 cut(s) | 279 |
| AseI | ATTAAT | 1 cut(s) | 330 |
| AspLEI | GCGC | 1 cut(s) | 184 |
| AsuHPI | GGTGA | 2 cut(s) | 296, 362 |
| AvaI | CYCGRG | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 72 |
| BciT130I | CCWGG | 1 cut(s) | 245 |
| BcoDI | GTCTC | 1 cut(s) | 347 |
| BcuI | ACTAGT | 1 cut(s) | 272 |
| BfaI | CTAG | 2 cut(s) | 192, 273 |
| BfrI | CTTAAG | 1 cut(s) | 112 |
| BisI | GCNGC | 1 cut(s) | 33 |
| BlsI | GCNGC | 1 cut(s) | 34 |
| BmcAI | AGTACT | 1 cut(s) | 277 |
| Bme1390I | CCNGG | 1 cut(s) | 245 |
| BmeT110I | CYCGRG | 1 cut(s) | 279 |
| BmiI | GGNNCC | 1 cut(s) | 231 |
| BmrFI | CCNGG | 1 cut(s) | 245 |
| BmrI | ACTGGG | 1 cut(s) | 354 |
| BmuI | ACTGGG | 1 cut(s) | 354 |
| BpiI | GAAGAC | 1 cut(s) | 72 |
| BsaJI | CCNNGG | 1 cut(s) | 303 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 76, 259 |
| Bse1I | ACTGG | 1 cut(s) | 360 |
| BseBI | CCWGG | 1 cut(s) | 245 |
| BseDI | CCNNGG | 1 cut(s) | 303 |
| BseGI | GGATG | 1 cut(s) | 253 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 76, 259 |
| BseNI | ACTGG | 1 cut(s) | 360 |
| BsgI | GTGCAG | 1 cut(s) | 30 |
| BsiHKCI | CYCGRG | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 76, 259 |
| BsmAI | GTCTC | 1 cut(s) | 347 |
| BsoBI | CYCGRG | 1 cut(s) | 279 |
| Bsp1407I | TGTACA | 1 cut(s) | 309 |
| BspACI | CCGC | 2 cut(s) | 32, 35 |
| BspLI | GGNNCC | 1 cut(s) | 231 |
| BspTI | CTTAAG | 1 cut(s) | 112 |
| BsrGI | TGTACA | 1 cut(s) | 309 |
| BsrI | ACTGG | 1 cut(s) | 360 |
| BssECI | CCNNGG | 1 cut(s) | 303 |
| Bst2UI | CCWGG | 1 cut(s) | 245 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstAFI | CTTAAG | 1 cut(s) | 112 |
| BstAUI | TGTACA | 1 cut(s) | 309 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 74, 257 |
| BstF5I | GGATG | 1 cut(s) | 253 |
| BstHHI | GCGC | 1 cut(s) | 184 |
| BstMAI | GTCTC | 1 cut(s) | 347 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 188 |
| BstNI | CCWGG | 1 cut(s) | 245 |
| BstSCI | CCNGG | 1 cut(s) | 243 |
| BstV2I | GAAGAC | 1 cut(s) | 72 |
| BtsCI | GGATG | 1 cut(s) | 253 |
| BtsIMutI | CAGTG | 1 cut(s) | 47 |
| CfoI | GCGC | 1 cut(s) | 184 |
| Csp6I | GTAC | 3 cut(s) | 270, 276, 310 |
| CviJI | RGCY | 2 cut(s) | 119, 170 |
| CviKI_1 | RGCY | 2 cut(s) | 119, 170 |
| CviQI | GTAC | 3 cut(s) | 270, 276, 310 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| Eco57I | CTGAAG | 1 cut(s) | 71 |
| Eco88I | CYCGRG | 1 cut(s) | 279 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 74, 257 |
| EcoRII | CCWGG | 1 cut(s) | 243 |
| FaiI | YATR | 3 cut(s) | 174, 294, 296 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 147, 179 |
| Fnu4HI | GCNGC | 1 cut(s) | 33 |
| FokI | GGATG | 1 cut(s) | 260 |
| Fsp4HI | GCNGC | 1 cut(s) | 33 |
| FspBI | CTAG | 2 cut(s) | 192, 273 |
| GlaI | GCGC | 1 cut(s) | 183 |
| GluI | GCNGC | 1 cut(s) | 33 |
| HhaI | GCGC | 1 cut(s) | 184 |
| Hin6I | GCGC | 1 cut(s) | 182 |
| HinP1I | GCGC | 1 cut(s) | 182 |
| HincII | GTYRAC | 1 cut(s) | 13 |
| HindII | GTYRAC | 1 cut(s) | 13 |
| HinfI | GANTC | 2 cut(s) | 263, 355 |
| HphI | GGTGA | 2 cut(s) | 296, 362 |
| Hpy166II | GTNNAC | 3 cut(s) | 13, 137, 310 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 1 cut(s) | 152 |
| Hpy8I | GTNNAC | 3 cut(s) | 13, 137, 310 |
| HpyAV | CCTTC | 3 cut(s) | 46, 135, 281 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 188 |
| HspAI | GCGC | 1 cut(s) | 182 |
| LpnPI | CCDG | 4 cut(s) | 183, 230, 246, 257 |
| MaeI | CTAG | 2 cut(s) | 192, 273 |
| MaeIII | GTNAC | 1 cut(s) | 40 |
| MboII | GAAGA | 4 cut(s) | 77, 236, 312, 315 |
| MlyI | GAGTC | 1 cut(s) | 349 |
| MnlI | CCTC | 7 cut(s) | 70, 88, 220, 253, 263, 275, 313 |
| MseI | TTAA | 2 cut(s) | 113, 330 |
| MspCI | CTTAAG | 1 cut(s) | 112 |
| MspR9I | CCNGG | 1 cut(s) | 245 |
| MvaI | CCWGG | 1 cut(s) | 245 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 188 |
| NlaIV | GGNNCC | 1 cut(s) | 231 |
| PaeR7I | CTCGAG | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 263 |
| PfoI | TCCNGGA | 1 cut(s) | 243 |
| PkrI | GCNGC | 1 cut(s) | 34 |
| PleI | GAGTC | 1 cut(s) | 349 |
| PpsI | GAGTC | 1 cut(s) | 349 |
| PshBI | ATTAAT | 1 cut(s) | 330 |
| Psp6I | CCWGG | 1 cut(s) | 243 |
| PspGI | CCWGG | 1 cut(s) | 243 |
| PspN4I | GGNNCC | 1 cut(s) | 231 |
| PspXI | VCTCGAGB | 1 cut(s) | 279 |
| RsaI | GTAC | 3 cut(s) | 271, 277, 311 |
| RsaNI | GTAC | 3 cut(s) | 270, 276, 310 |
| SaqAI | TTAA | 2 cut(s) | 113, 330 |
| SatI | GCNGC | 1 cut(s) | 33 |
| ScaI | AGTACT | 1 cut(s) | 277 |
| SchI | GAGTC | 1 cut(s) | 349 |
| ScrFI | CCNGG | 1 cut(s) | 245 |
| SetI | ASST | 8 cut(s) | 72, 81, 172, 189, 202, 235, 286, 292 |
| Sfr274I | CTCGAG | 1 cut(s) | 279 |
| SlaI | CTCGAG | 1 cut(s) | 279 |
| SmlI | CTYRAG | 2 cut(s) | 112, 279 |
| SmoI | CTYRAG | 2 cut(s) | 112, 279 |
| SpeI | ACTAGT | 1 cut(s) | 272 |
| SsiI | CCGC | 2 cut(s) | 32, 35 |
| SspI | AATATT | 2 cut(s) | 88, 337 |
| SspMI | CTAG | 2 cut(s) | 192, 273 |
| StyD4I | CCNGG | 1 cut(s) | 243 |
| TaqI | TCGA | 2 cut(s) | 280, 340 |
| TatI | WGTACW | 3 cut(s) | 269, 275, 309 |
| TauI | GCSGC | 1 cut(s) | 35 |
| TfiI | GAWTC | 1 cut(s) | 263 |
| Tru1I | TTAA | 2 cut(s) | 113, 330 |
| Tru9I | TTAA | 2 cut(s) | 113, 330 |
| TscAI | CASTG | 1 cut(s) | 54 |
| TspRI | CASTG | 1 cut(s) | 54 |
| Vha464I | CTTAAG | 1 cut(s) | 112 |
| VspI | ATTAAT | 1 cut(s) | 330 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 74, 257 |
| XhoI | CTCGAG | 1 cut(s) | 279 |
| XspI | CTAG | 2 cut(s) | 192, 273 |
| ZrmI | AGTACT | 1 cut(s) | 277 |