Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 187, 293 |
| AccB1I | GGYRCC | 2 cut(s) | 22, 329 |
| AciI | CCGC | 1 cut(s) | 236 |
| AdeI | CACNNNGTG | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 266, 302 |
| AflII | CTTAAG | 1 cut(s) | 311 |
| AflIII | ACRYGT | 1 cut(s) | 347 |
| AjiI | CACGTC | 1 cut(s) | 350 |
| AluBI | AGCT | 1 cut(s) | 60 |
| AluI | AGCT | 1 cut(s) | 60 |
| ApeKI | GCWGC | 1 cut(s) | 193 |
| AsuHPI | GGTGA | 1 cut(s) | 328 |
| BanI | GGYRCC | 2 cut(s) | 22, 329 |
| BbvI | GCAGC | 1 cut(s) | 205 |
| BccI | CCATC | 1 cut(s) | 320 |
| BceAI | ACGGC | 1 cut(s) | 268 |
| BclI | TGATCA | 1 cut(s) | 337 |
| BfaI | CTAG | 4 cut(s) | 57, 68, 95, 261 |
| BfmI | CTRYAG | 1 cut(s) | 300 |
| BfrI | CTTAAG | 1 cut(s) | 311 |
| BfuAI | ACCTGC | 2 cut(s) | 187, 293 |
| BisI | GCNGC | 1 cut(s) | 194 |
| BlsI | GCNGC | 1 cut(s) | 195 |
| BmgBI | CACGTC | 1 cut(s) | 350 |
| BmiI | GGNNCC | 2 cut(s) | 24, 331 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 280, 312 |
| Bsa29I | ATCGAT | 1 cut(s) | 324 |
| BsaJI | CCNNGG | 1 cut(s) | 284 |
| BsaWI | WCCGGW | 1 cut(s) | 37 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 266, 302 |
| BseCI | ATCGAT | 1 cut(s) | 324 |
| BseDI | CCNNGG | 1 cut(s) | 284 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 266, 302 |
| BseRI | GAGGAG | 1 cut(s) | 285 |
| BseXI | GCAGC | 1 cut(s) | 205 |
| BsgI | GTGCAG | 1 cut(s) | 212 |
| BshNI | GGYRCC | 2 cut(s) | 22, 329 |
| BshVI | ATCGAT | 1 cut(s) | 324 |
| BsiSI | CCGG | 1 cut(s) | 38 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 266, 302 |
| BsmI | GAATGC | 1 cut(s) | 226 |
| Bsp143I | GATC | 1 cut(s) | 337 |
| BspACI | CCGC | 1 cut(s) | 236 |
| BspDI | ATCGAT | 1 cut(s) | 324 |
| BspLI | GGNNCC | 2 cut(s) | 24, 331 |
| BspMAI | CTGCAG | 1 cut(s) | 304 |
| BspMI | ACCTGC | 2 cut(s) | 187, 293 |
| BspT107I | GGYRCC | 2 cut(s) | 22, 329 |
| BspTI | CTTAAG | 1 cut(s) | 311 |
| BssECI | CCNNGG | 1 cut(s) | 284 |
| BssMI | GATC | 1 cut(s) | 337 |
| Bst4CI | ACNGT | 1 cut(s) | 190 |
| BstAFI | CTTAAG | 1 cut(s) | 311 |
| BstC8I | GCNNGC | 1 cut(s) | 78 |
| BstDSI | CCRYGG | 1 cut(s) | 284 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 300 |
| BstKTI | GATC | 1 cut(s) | 340 |
| BstMBI | GATC | 1 cut(s) | 337 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 73, 280 |
| BstSFI | CTRYAG | 1 cut(s) | 300 |
| BstV1I | GCAGC | 1 cut(s) | 205 |
| Bsu15I | ATCGAT | 1 cut(s) | 324 |
| BsuTUI | ATCGAT | 1 cut(s) | 324 |
| BtgI | CCRYGG | 1 cut(s) | 284 |
| BtrI | CACGTC | 1 cut(s) | 350 |
| BveI | ACCTGC | 2 cut(s) | 187, 293 |
| Cac8I | GCNNGC | 1 cut(s) | 78 |
| ClaI | ATCGAT | 1 cut(s) | 324 |
| CseI | GACGC | 1 cut(s) | 23 |
| CviJI | RGCY | 5 cut(s) | 60, 76, 242, 283, 310 |
| CviKI_1 | RGCY | 5 cut(s) | 60, 76, 242, 283, 310 |
| DpnI | GATC | 1 cut(s) | 339 |
| DpnII | GATC | 1 cut(s) | 337 |
| DraIII | CACNNNGTG | 1 cut(s) | 107 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 300 |
| FauNDI | CATATG | 1 cut(s) | 232 |
| FbaI | TGATCA | 1 cut(s) | 337 |
| Fnu4HI | GCNGC | 1 cut(s) | 194 |
| Fsp4HI | GCNGC | 1 cut(s) | 194 |
| FspBI | CTAG | 4 cut(s) | 57, 68, 95, 261 |
| GluI | GCNGC | 1 cut(s) | 194 |
| HapII | CCGG | 1 cut(s) | 38 |
| HgaI | GACGC | 1 cut(s) | 23 |
| HinfI | GANTC | 1 cut(s) | 289 |
| HpaII | CCGG | 1 cut(s) | 38 |
| HphI | GGTGA | 1 cut(s) | 328 |
| Hpy99I | CGWCG | 1 cut(s) | 354 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 190 |
| HpyCH4IV | ACGT | 1 cut(s) | 349 |
| HpyCH4V | TGCA | 4 cut(s) | 46, 193, 226, 302 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 73, 280 |
| HpySE526I | ACGT | 1 cut(s) | 349 |
| Ksp22I | TGATCA | 1 cut(s) | 337 |
| Kzo9I | GATC | 1 cut(s) | 337 |
| LpnPI | CCDG | 5 cut(s) | 51, 182, 256, 288, 312 |
| Lsp1109I | GCAGC | 1 cut(s) | 205 |
| MaeI | CTAG | 4 cut(s) | 57, 68, 95, 261 |
| MaeII | ACGT | 1 cut(s) | 349 |
| MaeIII | GTNAC | 2 cut(s) | 97, 253 |
| MalI | GATC | 1 cut(s) | 339 |
| MboI | GATC | 1 cut(s) | 337 |
| MlyI | GAGTC | 1 cut(s) | 298 |
| MnlI | CCTC | 2 cut(s) | 303, 306 |
| MseI | TTAA | 2 cut(s) | 279, 312 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MspCI | CTTAAG | 1 cut(s) | 311 |
| MspI | CCGG | 1 cut(s) | 38 |
| Mva1269I | GAATGC | 1 cut(s) | 226 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 73, 280 |
| NdeI | CATATG | 1 cut(s) | 232 |
| NdeII | GATC | 1 cut(s) | 337 |
| NlaIV | GGNNCC | 2 cut(s) | 24, 331 |
| NmuCI | GTSAC | 2 cut(s) | 97, 253 |
| PctI | GAATGC | 1 cut(s) | 226 |
| PkrI | GCNGC | 1 cut(s) | 195 |
| PleI | GAGTC | 1 cut(s) | 297 |
| PpsI | GAGTC | 1 cut(s) | 297 |
| PspN4I | GGNNCC | 2 cut(s) | 24, 331 |
| PstI | CTGCAG | 1 cut(s) | 304 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SaqAI | TTAA | 2 cut(s) | 279, 312 |
| SatI | GCNGC | 1 cut(s) | 194 |
| Sau3AI | GATC | 1 cut(s) | 337 |
| SbfI | CCTGCAGG | 1 cut(s) | 304 |
| SchI | GAGTC | 1 cut(s) | 298 |
| SdaI | CCTGCAGG | 1 cut(s) | 304 |
| SetI | ASST | 7 cut(s) | 58, 62, 201, 262, 307, 318, 352 |
| SfcI | CTRYAG | 1 cut(s) | 300 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| SmlI | CTYRAG | 1 cut(s) | 311 |
| SmoI | CTYRAG | 1 cut(s) | 311 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 304 |
| SsiI | CCGC | 1 cut(s) | 236 |
| SspMI | CTAG | 4 cut(s) | 57, 68, 95, 261 |
| TaaI | ACNGT | 1 cut(s) | 190 |
| TaiI | ACGT | 1 cut(s) | 352 |
| TaqI | TCGA | 1 cut(s) | 324 |
| Tru1I | TTAA | 2 cut(s) | 279, 312 |
| Tru9I | TTAA | 2 cut(s) | 279, 312 |
| TseFI | GTSAC | 2 cut(s) | 97, 253 |
| TseI | GCWGC | 1 cut(s) | 193 |
| Tsp45I | GTSAC | 2 cut(s) | 97, 253 |
| TspDTI | ATGAA | 1 cut(s) | 219 |
| Vha464I | CTTAAG | 1 cut(s) | 311 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 300 |
| XspI | CTAG | 4 cut(s) | 57, 68, 95, 261 |