Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 262 |
| AccB1I | GGYRCC | 1 cut(s) | 262 |
| AccBSI | CCGCTC | 1 cut(s) | 8 |
| AciI | CCGC | 1 cut(s) | 8 |
| AclWI | GGATC | 1 cut(s) | 108 |
| AfaI | GTAC | 4 cut(s) | 264, 285, 310, 344 |
| AhlI | ACTAGT | 1 cut(s) | 305 |
| AlwI | GGATC | 1 cut(s) | 108 |
| AseI | ATTAAT | 1 cut(s) | 42 |
| Asp718I | GGTACC | 1 cut(s) | 262 |
| AsuHPI | GGTGA | 1 cut(s) | 329 |
| BanI | GGYRCC | 1 cut(s) | 262 |
| BccI | CCATC | 1 cut(s) | 88 |
| BcuI | ACTAGT | 1 cut(s) | 305 |
| BfaI | CTAG | 1 cut(s) | 306 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| BmcAI | AGTACT | 1 cut(s) | 310 |
| BmiI | GGNNCC | 1 cut(s) | 264 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 29 |
| BpuEI | CTTGAG | 1 cut(s) | 297 |
| BsaJI | CCNNGG | 1 cut(s) | 336 |
| BseDI | CCNNGG | 1 cut(s) | 336 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseRI | GAGGAG | 1 cut(s) | 272 |
| BsgI | GTGCAG | 1 cut(s) | 63 |
| BshNI | GGYRCC | 1 cut(s) | 262 |
| BslFI | GGGAC | 1 cut(s) | 228 |
| BsmFI | GGGAC | 1 cut(s) | 228 |
| Bsp1407I | TGTACA | 1 cut(s) | 342 |
| Bsp143I | GATC | 1 cut(s) | 100 |
| BspACI | CCGC | 1 cut(s) | 8 |
| BspLI | GGNNCC | 1 cut(s) | 264 |
| BspPI | GGATC | 1 cut(s) | 108 |
| BspT107I | GGYRCC | 1 cut(s) | 262 |
| BsrBI | CCGCTC | 1 cut(s) | 8 |
| BsrGI | TGTACA | 1 cut(s) | 342 |
| BssECI | CCNNGG | 1 cut(s) | 336 |
| BssMI | GATC | 1 cut(s) | 100 |
| Bst4CI | ACNGT | 2 cut(s) | 174, 185 |
| BstAUI | TGTACA | 1 cut(s) | 342 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstKTI | GATC | 1 cut(s) | 103 |
| BstMBI | GATC | 1 cut(s) | 100 |
| BstX2I | RGATCY | 1 cut(s) | 100 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 211 |
| BstYI | RGATCY | 1 cut(s) | 100 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| Csp6I | GTAC | 4 cut(s) | 263, 284, 309, 343 |
| CviAII | CATG | 1 cut(s) | 37 |
| CviJI | RGCY | 3 cut(s) | 23, 117, 203 |
| CviKI_1 | RGCY | 3 cut(s) | 23, 117, 203 |
| CviQI | GTAC | 4 cut(s) | 263, 284, 309, 343 |
| DpnI | GATC | 1 cut(s) | 102 |
| DpnII | GATC | 1 cut(s) | 100 |
| FaeI | CATG | 1 cut(s) | 40 |
| FaiI | YATR | 6 cut(s) | 26, 38, 291, 303, 327, 329 |
| FaqI | GGGAC | 1 cut(s) | 228 |
| FatI | CATG | 1 cut(s) | 36 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 1 cut(s) | 293 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| FspBI | CTAG | 1 cut(s) | 306 |
| GluI | GCNGC | 1 cut(s) | 9 |
| Hin1II | CATG | 1 cut(s) | 40 |
| HincII | GTYRAC | 1 cut(s) | 49 |
| HindII | GTYRAC | 1 cut(s) | 49 |
| HphI | GGTGA | 1 cut(s) | 329 |
| Hpy166II | GTNNAC | 2 cut(s) | 49, 343 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| Hpy8I | GTNNAC | 2 cut(s) | 49, 343 |
| HpyAV | CCTTC | 1 cut(s) | 314 |
| HpyCH4III | ACNGT | 2 cut(s) | 174, 185 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| Hsp92II | CATG | 1 cut(s) | 40 |
| KpnI | GGTACC | 1 cut(s) | 266 |
| Kzo9I | GATC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 17, 263, 279 |
| MaeI | CTAG | 1 cut(s) | 306 |
| MaeIII | GTNAC | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 102 |
| MbiI | CCGCTC | 1 cut(s) | 8 |
| MboI | GATC | 1 cut(s) | 100 |
| MboII | GAAGA | 1 cut(s) | 150 |
| MflI | RGATCY | 1 cut(s) | 100 |
| MnlI | CCTC | 6 cut(s) | 91, 103, 121, 250, 253, 346 |
| MseI | TTAA | 3 cut(s) | 42, 54, 84 |
| NdeII | GATC | 1 cut(s) | 100 |
| NlaIII | CATG | 1 cut(s) | 40 |
| NlaIV | GGNNCC | 1 cut(s) | 264 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PshBI | ATTAAT | 1 cut(s) | 42 |
| PspN4I | GGNNCC | 1 cut(s) | 264 |
| PsuI | RGATCY | 1 cut(s) | 100 |
| RsaI | GTAC | 4 cut(s) | 264, 285, 310, 344 |
| RsaNI | GTAC | 4 cut(s) | 263, 284, 309, 343 |
| SaqAI | TTAA | 3 cut(s) | 42, 54, 84 |
| SatI | GCNGC | 1 cut(s) | 9 |
| Sau3AI | GATC | 1 cut(s) | 100 |
| ScaI | AGTACT | 1 cut(s) | 310 |
| SetI | ASST | 6 cut(s) | 114, 141, 264, 268, 319, 325 |
| SgeI | CNNG | 7 cut(s) | 44, 49, 278, 290, 318, 326, 349 |
| SmlI | CTYRAG | 1 cut(s) | 312 |
| SmoI | CTYRAG | 1 cut(s) | 312 |
| SpeI | ACTAGT | 1 cut(s) | 305 |
| SsiI | CCGC | 1 cut(s) | 8 |
| SspI | AATATT | 1 cut(s) | 370 |
| SspMI | CTAG | 1 cut(s) | 306 |
| TaaI | ACNGT | 2 cut(s) | 174, 185 |
| TatI | WGTACW | 3 cut(s) | 283, 308, 342 |
| TauI | GCSGC | 1 cut(s) | 11 |
| Tru1I | TTAA | 3 cut(s) | 42, 54, 84 |
| Tru9I | TTAA | 3 cut(s) | 42, 54, 84 |
| TspDTI | ATGAA | 2 cut(s) | 155, 306 |
| VspI | ATTAAT | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 306 |
| ZrmI | AGTACT | 1 cut(s) | 310 |