Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 236 |
| AcsI | RAATTY | 1 cut(s) | 261 |
| AcuI | CTGAAG | 1 cut(s) | 15 |
| AfaI | GTAC | 2 cut(s) | 253, 441 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 253, 432 |
| AgsI | TTSAA | 2 cut(s) | 283, 380 |
| AjnI | CCWGG | 1 cut(s) | 247 |
| AluBI | AGCT | 2 cut(s) | 18, 305 |
| AluI | AGCT | 2 cut(s) | 18, 305 |
| Alw26I | GTCTC | 2 cut(s) | 188, 365 |
| AoxI | GGCC | 1 cut(s) | 447 |
| ApeKI | GCWGC | 1 cut(s) | 15 |
| ApoI | RAATTY | 1 cut(s) | 261 |
| AspA2I | CCTAGG | 1 cut(s) | 431 |
| AspS9I | GGNCC | 1 cut(s) | 244 |
| AvaII | GGWCC | 1 cut(s) | 244 |
| AvrII | CCTAGG | 1 cut(s) | 431 |
| BanII | GRGCYC | 1 cut(s) | 466 |
| BbvI | GCAGC | 1 cut(s) | 27 |
| BccI | CCATC | 4 cut(s) | 166, 178, 403, 439 |
| BceAI | ACGGC | 1 cut(s) | 270 |
| BciT130I | CCWGG | 1 cut(s) | 249 |
| BcoDI | GTCTC | 2 cut(s) | 188, 365 |
| BfaI | CTAG | 3 cut(s) | 306, 432, 459 |
| BglII | AGATCT | 1 cut(s) | 214 |
| BisI | GCNGC | 1 cut(s) | 16 |
| BlnI | CCTAGG | 1 cut(s) | 431 |
| BlsI | GCNGC | 1 cut(s) | 17 |
| Bme1390I | CCNGG | 1 cut(s) | 249 |
| Bme18I | GGWCC | 1 cut(s) | 244 |
| BmgT120I | GGNCC | 1 cut(s) | 244 |
| BmiI | GGNNCC | 2 cut(s) | 246, 327 |
| BmrFI | CCNGG | 1 cut(s) | 249 |
| BmsI | GCATC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 3 cut(s) | 240, 247, 431 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 253, 432 |
| Bse3DI | GCAATG | 1 cut(s) | 476 |
| BseBI | CCWGG | 1 cut(s) | 249 |
| BseDI | CCNNGG | 3 cut(s) | 240, 247, 431 |
| BseGI | GGATG | 1 cut(s) | 427 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 253, 432 |
| BseMI | GCAATG | 1 cut(s) | 476 |
| BseRI | GAGGAG | 2 cut(s) | 191, 194 |
| BseXI | GCAGC | 1 cut(s) | 27 |
| BshFI | GGCC | 1 cut(s) | 449 |
| BsiSI | CCGG | 1 cut(s) | 37 |
| BslFI | GGGAC | 1 cut(s) | 230 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 253, 432 |
| BsmAI | GTCTC | 2 cut(s) | 188, 365 |
| BsmFI | GGGAC | 1 cut(s) | 230 |
| BsnI | GGCC | 1 cut(s) | 449 |
| Bsp1286I | GDGCHC | 1 cut(s) | 466 |
| Bsp1407I | TGTACA | 1 cut(s) | 439 |
| Bsp143I | GATC | 2 cut(s) | 106, 214 |
| BspANI | GGCC | 1 cut(s) | 449 |
| BspHI | TCATGA | 1 cut(s) | 7 |
| BspLI | GGNNCC | 2 cut(s) | 246, 327 |
| BsrDI | GCAATG | 1 cut(s) | 476 |
| BsrGI | TGTACA | 1 cut(s) | 439 |
| BssECI | CCNNGG | 3 cut(s) | 240, 247, 431 |
| BssMI | GATC | 2 cut(s) | 106, 214 |
| BssT1I | CCWWGG | 2 cut(s) | 240, 431 |
| Bst2UI | CCWGG | 1 cut(s) | 249 |
| Bst6I | CTCTTC | 2 cut(s) | 363, 460 |
| BstAUI | TGTACA | 1 cut(s) | 439 |
| BstF5I | GGATG | 1 cut(s) | 427 |
| BstKTI | GATC | 2 cut(s) | 109, 217 |
| BstMAI | GTCTC | 2 cut(s) | 188, 365 |
| BstMBI | GATC | 2 cut(s) | 106, 214 |
| BstNI | CCWGG | 1 cut(s) | 249 |
| BstSCI | CCNGG | 1 cut(s) | 247 |
| BstV1I | GCAGC | 1 cut(s) | 27 |
| BstX2I | RGATCY | 1 cut(s) | 214 |
| BstYI | RGATCY | 1 cut(s) | 214 |
| BsuRI | GGCC | 1 cut(s) | 449 |
| BtsCI | GGATG | 1 cut(s) | 427 |
| BtsI | GCAGTG | 1 cut(s) | 420 |
| BtsIMutI | CAGTG | 1 cut(s) | 420 |
| CciI | TCATGA | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 1 cut(s) | 244 |
| Csp6I | GTAC | 2 cut(s) | 252, 440 |
| CviAII | CATG | 3 cut(s) | 8, 50, 345 |
| CviJI | RGCY | 7 cut(s) | 18, 257, 305, 343, 394, 449, 464 |
| CviKI_1 | RGCY | 7 cut(s) | 18, 257, 305, 343, 394, 449, 464 |
| CviQI | GTAC | 2 cut(s) | 252, 440 |
| DpnI | GATC | 2 cut(s) | 108, 216 |
| DpnII | GATC | 2 cut(s) | 106, 214 |
| Eam1104I | CTCTTC | 2 cut(s) | 363, 460 |
| EarI | CTCTTC | 2 cut(s) | 363, 460 |
| Eco130I | CCWWGG | 2 cut(s) | 240, 431 |
| Eco24I | GRGCYC | 1 cut(s) | 466 |
| Eco47I | GGWCC | 1 cut(s) | 244 |
| Eco57I | CTGAAG | 1 cut(s) | 15 |
| EcoO109I | RGGNCCY | 1 cut(s) | 244 |
| EcoRII | CCWGG | 1 cut(s) | 247 |
| EcoT14I | CCWWGG | 2 cut(s) | 240, 431 |
| EcoT38I | GRGCYC | 1 cut(s) | 466 |
| ErhI | CCWWGG | 2 cut(s) | 240, 431 |
| FaeI | CATG | 3 cut(s) | 11, 53, 348 |
| FaiI | YATR | 9 cut(s) | 9, 51, 62, 162, 220, 232, 271, 346, 481 |
| FaqI | GGGAC | 1 cut(s) | 230 |
| FatI | CATG | 3 cut(s) | 7, 49, 344 |
| FblI | GTMKAC | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 1 cut(s) | 16 |
| FokI | GGATG | 1 cut(s) | 434 |
| FriOI | GRGCYC | 1 cut(s) | 466 |
| Fsp4HI | GCNGC | 1 cut(s) | 16 |
| FspBI | CTAG | 3 cut(s) | 306, 432, 459 |
| GluI | GCNGC | 1 cut(s) | 16 |
| HaeIII | GGCC | 1 cut(s) | 449 |
| HapII | CCGG | 1 cut(s) | 37 |
| Hin1II | CATG | 3 cut(s) | 11, 53, 348 |
| HinfI | GANTC | 3 cut(s) | 4, 128, 196 |
| HpaII | CCGG | 1 cut(s) | 37 |
| Hpy166II | GTNNAC | 2 cut(s) | 237, 293 |
| Hpy188III | TCNNGA | 1 cut(s) | 8 |
| Hpy8I | GTNNAC | 2 cut(s) | 237, 293 |
| HpyAV | CCTTC | 3 cut(s) | 76, 90, 268 |
| HpyCH4V | TGCA | 3 cut(s) | 190, 205, 474 |
| Hsp92II | CATG | 3 cut(s) | 11, 53, 348 |
| Kzo9I | GATC | 2 cut(s) | 106, 214 |
| LpnPI | CCDG | 5 cut(s) | 4, 50, 234, 261, 308 |
| Lsp1109I | GCAGC | 1 cut(s) | 27 |
| LweI | GCATC | 1 cut(s) | 412 |
| MaeI | CTAG | 3 cut(s) | 306, 432, 459 |
| MalI | GATC | 2 cut(s) | 108, 216 |
| MboI | GATC | 2 cut(s) | 106, 214 |
| MboII | GAAGA | 3 cut(s) | 235, 380, 447 |
| MfeI | CAATTG | 2 cut(s) | 286, 375 |
| MflI | RGATCY | 1 cut(s) | 214 |
| MhlI | GDGCHC | 1 cut(s) | 466 |
| MluCI | AATT | 3 cut(s) | 261, 286, 375 |
| MlyI | GAGTC | 2 cut(s) | 122, 190 |
| MmeI | TCCRAC | 1 cut(s) | 399 |
| MnlI | CCTC | 3 cut(s) | 4, 169, 172 |
| MseI | TTAA | 3 cut(s) | 102, 150, 339 |
| MslI | CAYNNNNRTG | 1 cut(s) | 54 |
| MspA1I | CMGCKG | 1 cut(s) | 18 |
| MspI | CCGG | 1 cut(s) | 37 |
| MspR9I | CCNGG | 1 cut(s) | 249 |
| MunI | CAATTG | 2 cut(s) | 286, 375 |
| MvaI | CCWGG | 1 cut(s) | 249 |
| NdeII | GATC | 2 cut(s) | 106, 214 |
| NlaIII | CATG | 3 cut(s) | 11, 53, 348 |
| NlaIV | GGNNCC | 2 cut(s) | 246, 327 |
| NmeAIII | GCCGAG | 1 cut(s) | 445 |
| PagI | TCATGA | 1 cut(s) | 7 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PkrI | GCNGC | 1 cut(s) | 17 |
| PleI | GAGTC | 2 cut(s) | 122, 190 |
| PpsI | GAGTC | 2 cut(s) | 122, 190 |
| PpuMI | RGGWCCY | 1 cut(s) | 244 |
| Psp5II | RGGWCCY | 1 cut(s) | 244 |
| Psp6I | CCWGG | 1 cut(s) | 247 |
| PspGI | CCWGG | 1 cut(s) | 247 |
| PspN4I | GGNNCC | 2 cut(s) | 246, 327 |
| PspPI | GGNCC | 1 cut(s) | 244 |
| PspPPI | RGGWCCY | 1 cut(s) | 244 |
| PsuI | RGATCY | 1 cut(s) | 214 |
| PvuII | CAGCTG | 1 cut(s) | 18 |
| RsaI | GTAC | 2 cut(s) | 253, 441 |
| RsaNI | GTAC | 2 cut(s) | 252, 440 |
| RseI | CAYNNNNRTG | 1 cut(s) | 54 |
| SaqAI | TTAA | 3 cut(s) | 102, 150, 339 |
| SatI | GCNGC | 1 cut(s) | 16 |
| Sau3AI | GATC | 2 cut(s) | 106, 214 |
| Sau96I | GGNCC | 1 cut(s) | 244 |
| SchI | GAGTC | 2 cut(s) | 122, 190 |
| ScrFI | CCNGG | 1 cut(s) | 249 |
| SduI | GDGCHC | 1 cut(s) | 466 |
| SetI | ASST | 7 cut(s) | 20, 246, 253, 279, 298, 307, 327 |
| SfaNI | GCATC | 1 cut(s) | 412 |
| SinI | GGWCC | 1 cut(s) | 244 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 54 |
| Sse9I | AATT | 3 cut(s) | 261, 286, 375 |
| SspMI | CTAG | 3 cut(s) | 306, 432, 459 |
| StyD4I | CCNGG | 1 cut(s) | 247 |
| StyI | CCWWGG | 2 cut(s) | 240, 431 |
| TaqI | TCGA | 1 cut(s) | 94 |
| TasI | AATT | 3 cut(s) | 261, 286, 375 |
| TatI | WGTACW | 1 cut(s) | 439 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 3 cut(s) | 102, 150, 339 |
| Tru9I | TTAA | 3 cut(s) | 102, 150, 339 |
| TscAI | CASTG | 1 cut(s) | 420 |
| TseI | GCWGC | 1 cut(s) | 15 |
| TspDTI | ATGAA | 3 cut(s) | 17, 39, 58 |
| TspRI | CASTG | 1 cut(s) | 420 |
| VpaK11BI | GGWCC | 1 cut(s) | 244 |
| XapI | RAATTY | 1 cut(s) | 261 |
| XmaJI | CCTAGG | 1 cut(s) | 431 |
| XmiI | GTMKAC | 1 cut(s) | 236 |
| XspI | CTAG | 3 cut(s) | 306, 432, 459 |