zinc-binding in reverse transcriptase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MRP-L47 | PF06984 | 1 - 39 | 2.4e-11 | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 105 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 75, 138 |
| AgsI | TTSAA | 1 cut(s) | 125 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 15 |
| AjnI | CCWGG | 1 cut(s) | 137 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| BciT130I | CCWGG | 1 cut(s) | 139 |
| BfoI | RGCGCY | 1 cut(s) | 64 |
| Bme1390I | CCNGG | 1 cut(s) | 139 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 15 |
| BmrFI | CCNGG | 1 cut(s) | 139 |
| BmsI | GCATC | 1 cut(s) | 12 |
| Bpu10I | CCTNAGC | 1 cut(s) | 57 |
| BsaAI | YACGTR | 1 cut(s) | 103 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 75, 138 |
| BseBI | CCWGG | 1 cut(s) | 139 |
| BseGI | GGATG | 1 cut(s) | 168 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 75, 138 |
| BseMII | CTCAG | 3 cut(s) | 48, 102, 141 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 75, 138 |
| BspCNI | CTCAG | 3 cut(s) | 49, 103, 142 |
| Bst2UI | CCWGG | 1 cut(s) | 139 |
| Bst6I | CTCTTC | 1 cut(s) | 152 |
| BstBAI | YACGTR | 1 cut(s) | 103 |
| BstDEI | CTNAG | 3 cut(s) | 57, 111, 150 |
| BstF5I | GGATG | 1 cut(s) | 168 |
| BstH2I | RGCGCY | 1 cut(s) | 64 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstNI | CCWGG | 1 cut(s) | 139 |
| BstSCI | CCNGG | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 168 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| CfoI | GCGC | 1 cut(s) | 63 |
| Csp6I | GTAC | 1 cut(s) | 104 |
| CviQI | GTAC | 1 cut(s) | 104 |
| DdeI | CTNAG | 3 cut(s) | 57, 111, 150 |
| DriI | GACNNNNNGTC | 1 cut(s) | 15 |
| Eam1104I | CTCTTC | 1 cut(s) | 152 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 15 |
| EarI | CTCTTC | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 137 |
| FokI | GGATG | 1 cut(s) | 175 |
| GlaI | GCGC | 1 cut(s) | 62 |
| HaeII | RGCGCY | 1 cut(s) | 64 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HinfI | GANTC | 3 cut(s) | 10, 37, 134 |
| Hpy188I | TCNGA | 1 cut(s) | 21 |
| Hpy188III | TCNNGA | 1 cut(s) | 56 |
| HpyAV | CCTTC | 1 cut(s) | 74 |
| HpyCH4IV | ACGT | 1 cut(s) | 102 |
| HpyF3I | CTNAG | 3 cut(s) | 57, 111, 150 |
| HpySE526I | ACGT | 1 cut(s) | 102 |
| HspAI | GCGC | 1 cut(s) | 61 |
| LpnPI | CCDG | 3 cut(s) | 69, 124, 151 |
| LweI | GCATC | 1 cut(s) | 12 |
| MaeII | ACGT | 1 cut(s) | 102 |
| MboII | GAAGA | 3 cut(s) | 32, 137, 169 |
| MfeI | CAATTG | 1 cut(s) | 120 |
| MluCI | AATT | 1 cut(s) | 120 |
| MlyI | GAGTC | 1 cut(s) | 4 |
| MnlI | CCTC | 3 cut(s) | 69, 135, 153 |
| MspR9I | CCNGG | 1 cut(s) | 139 |
| MunI | CAATTG | 1 cut(s) | 120 |
| MvaI | CCWGG | 1 cut(s) | 139 |
| PfeI | GAWTC | 2 cut(s) | 37, 134 |
| PfoI | TCCNGGA | 1 cut(s) | 137 |
| PleI | GAGTC | 1 cut(s) | 4 |
| PpsI | GAGTC | 1 cut(s) | 4 |
| Ppu21I | YACGTR | 1 cut(s) | 103 |
| Psp6I | CCWGG | 1 cut(s) | 137 |
| PspGI | CCWGG | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 105 |
| RsaNI | GTAC | 1 cut(s) | 104 |
| SchI | GAGTC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 139 |
| SetI | ASST | 2 cut(s) | 105, 146 |
| SfaNI | GCATC | 1 cut(s) | 12 |
| SgeI | CNNG | 7 cut(s) | 41, 68, 109, 113, 143, 150, 151 |
| Sse9I | AATT | 1 cut(s) | 120 |
| StyD4I | CCNGG | 1 cut(s) | 137 |
| TaiI | ACGT | 1 cut(s) | 105 |
| TasI | AATT | 1 cut(s) | 120 |
| TfiI | GAWTC | 2 cut(s) | 37, 134 |
| TscAI | CASTG | 1 cut(s) | 115 |
| TspDTI | ATGAA | 1 cut(s) | 170 |
| TspRI | CASTG | 1 cut(s) | 115 |