Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 77 - 174 | 2.5e-11 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 103, 160 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 209 |
| AflIII | ACRYGT | 2 cut(s) | 90, 334 |
| AgsI | TTSAA | 4 cut(s) | 72, 123, 287, 395 |
| AjiI | CACGTC | 1 cut(s) | 91 |
| AjnI | CCWGG | 1 cut(s) | 51 |
| AluBI | AGCT | 3 cut(s) | 83, 398, 521 |
| AluI | AGCT | 3 cut(s) | 83, 398, 521 |
| Alw21I | GWGCWC | 1 cut(s) | 493 |
| Alw26I | GTCTC | 2 cut(s) | 154, 506 |
| ApeKI | GCWGC | 1 cut(s) | 521 |
| AsuHPI | GGTGA | 2 cut(s) | 422, 457 |
| AxyI | CCTNAGG | 1 cut(s) | 465 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 375, 407 |
| Bbv12I | GWGCWC | 1 cut(s) | 493 |
| BbvI | GCAGC | 1 cut(s) | 508 |
| BciT130I | CCWGG | 1 cut(s) | 53 |
| BcoDI | GTCTC | 2 cut(s) | 154, 506 |
| BfaI | CTAG | 2 cut(s) | 84, 518 |
| BisI | GCNGC | 1 cut(s) | 522 |
| BlsI | GCNGC | 1 cut(s) | 523 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmgBI | CACGTC | 1 cut(s) | 91 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BmsI | GCATC | 2 cut(s) | 23, 403 |
| BpuEI | CTTGAG | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 2 cut(s) | 51, 52 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 209 |
| Bse1I | ACTGG | 1 cut(s) | 121 |
| Bse21I | CCTNAGG | 1 cut(s) | 465 |
| BseBI | CCWGG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 2 cut(s) | 51, 52 |
| BseGI | GGATG | 2 cut(s) | 241, 475 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseMII | CTCAG | 4 cut(s) | 176, 308, 456, 499 |
| BseNI | ACTGG | 1 cut(s) | 121 |
| BseXI | GCAGC | 1 cut(s) | 508 |
| BsiHKAI | GWGCWC | 1 cut(s) | 493 |
| BslFI | GGGAC | 1 cut(s) | 101 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BsmAI | GTCTC | 2 cut(s) | 154, 506 |
| BsmFI | GGGAC | 1 cut(s) | 101 |
| BsmI | GAATGC | 1 cut(s) | 41 |
| Bsp1286I | GDGCHC | 1 cut(s) | 493 |
| Bsp143I | GATC | 1 cut(s) | 504 |
| BspCNI | CTCAG | 4 cut(s) | 177, 307, 457, 498 |
| BsrI | ACTGG | 1 cut(s) | 121 |
| BssECI | CCNNGG | 2 cut(s) | 51, 52 |
| BssMI | GATC | 1 cut(s) | 504 |
| Bst2UI | CCWGG | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 2 cut(s) | 220, 434 |
| Bst6I | CTCTTC | 2 cut(s) | 157, 354 |
| BstC8I | GCNNGC | 1 cut(s) | 60 |
| BstDEI | CTNAG | 5 cut(s) | 185, 294, 307, 465, 485 |
| BstF5I | GGATG | 2 cut(s) | 241, 475 |
| BstKTI | GATC | 1 cut(s) | 507 |
| BstMAI | GTCTC | 2 cut(s) | 154, 506 |
| BstMBI | GATC | 1 cut(s) | 504 |
| BstNI | CCWGG | 1 cut(s) | 53 |
| BstNSI | RCATGY | 2 cut(s) | 62, 338 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 1 cut(s) | 508 |
| Bsu36I | CCTNAGG | 1 cut(s) | 465 |
| BtrI | CACGTC | 1 cut(s) | 91 |
| BtsCI | GGATG | 2 cut(s) | 241, 475 |
| BtsI | GCAGTG | 1 cut(s) | 200 |
| BtsIMutI | CAGTG | 2 cut(s) | 200, 493 |
| Cac8I | GCNNGC | 1 cut(s) | 60 |
| Csp6I | GTAC | 2 cut(s) | 102, 159 |
| CviAII | CATG | 2 cut(s) | 59, 335 |
| CviJI | RGCY | 4 cut(s) | 83, 368, 398, 521 |
| CviKI_1 | RGCY | 4 cut(s) | 83, 368, 398, 521 |
| CviQI | GTAC | 2 cut(s) | 102, 159 |
| DdeI | CTNAG | 5 cut(s) | 185, 294, 307, 465, 485 |
| DpnI | GATC | 1 cut(s) | 506 |
| DpnII | GATC | 1 cut(s) | 504 |
| Eam1104I | CTCTTC | 2 cut(s) | 157, 354 |
| EarI | CTCTTC | 2 cut(s) | 157, 354 |
| Eco81I | CCTNAGG | 1 cut(s) | 465 |
| EcoRII | CCWGG | 1 cut(s) | 51 |
| EcoT22I | ATGCAT | 2 cut(s) | 43, 405 |
| FaeI | CATG | 2 cut(s) | 62, 338 |
| FaiI | YATR | 6 cut(s) | 60, 336, 371, 378, 401, 405 |
| FaqI | GGGAC | 1 cut(s) | 101 |
| FatI | CATG | 2 cut(s) | 58, 334 |
| Fnu4HI | GCNGC | 1 cut(s) | 522 |
| FokI | GGATG | 2 cut(s) | 248, 482 |
| Fsp4HI | GCNGC | 1 cut(s) | 522 |
| FspBI | CTAG | 2 cut(s) | 84, 518 |
| GluI | GCNGC | 1 cut(s) | 522 |
| Hin1II | CATG | 2 cut(s) | 62, 338 |
| HincII | GTYRAC | 1 cut(s) | 216 |
| HindII | GTYRAC | 1 cut(s) | 216 |
| HinfI | GANTC | 5 cut(s) | 5, 239, 290, 298, 514 |
| HphI | GGTGA | 2 cut(s) | 422, 457 |
| Hpy166II | GTNNAC | 1 cut(s) | 216 |
| Hpy188I | TCNGA | 2 cut(s) | 297, 358 |
| Hpy188III | TCNNGA | 3 cut(s) | 251, 287, 464 |
| Hpy8I | GTNNAC | 1 cut(s) | 216 |
| HpyAV | CCTTC | 2 cut(s) | 253, 257 |
| HpyCH4III | ACNGT | 2 cut(s) | 220, 434 |
| HpyCH4IV | ACGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 5 cut(s) | 41, 62, 113, 320, 403 |
| HpyF3I | CTNAG | 5 cut(s) | 185, 294, 307, 465, 485 |
| HpySE526I | ACGT | 1 cut(s) | 90 |
| Hsp92II | CATG | 2 cut(s) | 62, 338 |
| Kzo9I | GATC | 1 cut(s) | 504 |
| LpnPI | CCDG | 7 cut(s) | 38, 65, 90, 102, 141, 264, 477 |
| Lsp1109I | GCAGC | 1 cut(s) | 508 |
| LweI | GCATC | 2 cut(s) | 23, 403 |
| MaeI | CTAG | 2 cut(s) | 84, 518 |
| MaeII | ACGT | 1 cut(s) | 90 |
| MaeIII | GTNAC | 3 cut(s) | 256, 428, 445 |
| MalI | GATC | 1 cut(s) | 506 |
| MboI | GATC | 1 cut(s) | 504 |
| MboII | GAAGA | 3 cut(s) | 144, 341, 383 |
| MhlI | GDGCHC | 1 cut(s) | 493 |
| MluCI | AATT | 1 cut(s) | 359 |
| MlyI | GAGTC | 3 cut(s) | 284, 307, 508 |
| MnlI | CCTC | 5 cut(s) | 213, 358, 460, 492, 524 |
| Mph1103I | ATGCAT | 2 cut(s) | 43, 405 |
| MseI | TTAA | 1 cut(s) | 135 |
| MslI | CAYNNNNRTG | 2 cut(s) | 63, 408 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| Mva1269I | GAATGC | 1 cut(s) | 41 |
| MvaI | CCWGG | 1 cut(s) | 53 |
| NdeII | GATC | 1 cut(s) | 504 |
| NlaIII | CATG | 2 cut(s) | 62, 338 |
| NmeAIII | GCCGAG | 1 cut(s) | 154 |
| NmuCI | GTSAC | 3 cut(s) | 256, 428, 445 |
| NsiI | ATGCAT | 2 cut(s) | 43, 405 |
| NspI | RCATGY | 2 cut(s) | 62, 338 |
| PaeI | GCATGC | 1 cut(s) | 62 |
| PasI | CCCWGGG | 1 cut(s) | 52 |
| PciI | ACATGT | 1 cut(s) | 334 |
| PctI | GAATGC | 1 cut(s) | 41 |
| PfeI | GAWTC | 2 cut(s) | 5, 239 |
| PkrI | GCNGC | 1 cut(s) | 523 |
| PleI | GAGTC | 3 cut(s) | 284, 306, 508 |
| PpsI | GAGTC | 3 cut(s) | 284, 306, 508 |
| PscI | ACATGT | 1 cut(s) | 334 |
| Psp6I | CCWGG | 1 cut(s) | 51 |
| PspGI | CCWGG | 1 cut(s) | 51 |
| RsaI | GTAC | 2 cut(s) | 103, 160 |
| RsaNI | GTAC | 2 cut(s) | 102, 159 |
| RseI | CAYNNNNRTG | 2 cut(s) | 63, 408 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| SatI | GCNGC | 1 cut(s) | 522 |
| Sau3AI | GATC | 1 cut(s) | 504 |
| SchI | GAGTC | 3 cut(s) | 284, 307, 508 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SduI | GDGCHC | 1 cut(s) | 493 |
| SfaNI | GCATC | 2 cut(s) | 23, 403 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 63, 408 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| SphI | GCATGC | 1 cut(s) | 62 |
| Sse9I | AATT | 1 cut(s) | 359 |
| SspMI | CTAG | 2 cut(s) | 84, 518 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| TaaI | ACNGT | 2 cut(s) | 220, 434 |
| TaiI | ACGT | 1 cut(s) | 93 |
| TasI | AATT | 1 cut(s) | 359 |
| TfiI | GAWTC | 2 cut(s) | 5, 239 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TscAI | CASTG | 2 cut(s) | 200, 493 |
| TseFI | GTSAC | 3 cut(s) | 256, 428, 445 |
| TseI | GCWGC | 1 cut(s) | 521 |
| Tsp45I | GTSAC | 3 cut(s) | 256, 428, 445 |
| TspDTI | ATGAA | 3 cut(s) | 141, 333, 341 |
| TspRI | CASTG | 2 cut(s) | 200, 493 |
| XceI | RCATGY | 2 cut(s) | 62, 338 |
| XspI | CTAG | 2 cut(s) | 84, 518 |
| Zsp2I | ATGCAT | 2 cut(s) | 43, 405 |