Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 243 |
| AccII | CGCG | 1 cut(s) | 263 |
| AciI | CCGC | 2 cut(s) | 261, 374 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 380 |
| AflIII | ACRYGT | 1 cut(s) | 43 |
| AgsI | TTSAA | 3 cut(s) | 127, 305, 351 |
| AhlI | ACTAGT | 1 cut(s) | 190 |
| AluBI | AGCT | 2 cut(s) | 187, 207 |
| AluI | AGCT | 2 cut(s) | 187, 207 |
| Alw26I | GTCTC | 1 cut(s) | 210 |
| ApeKI | GCWGC | 1 cut(s) | 478 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 256 |
| AspLEI | GCGC | 1 cut(s) | 265 |
| AsuHPI | GGTGA | 1 cut(s) | 503 |
| AsuNHI | GCTAGC | 1 cut(s) | 155 |
| BaeGI | GKGCMC | 1 cut(s) | 246 |
| BanI | GGYRCC | 1 cut(s) | 243 |
| BanII | GRGCYC | 2 cut(s) | 371, 412 |
| BbsI | GAAGAC | 2 cut(s) | 39, 159 |
| BbvI | GCAGC | 1 cut(s) | 465 |
| BccI | CCATC | 1 cut(s) | 398 |
| BcoDI | GTCTC | 1 cut(s) | 210 |
| BcuI | ACTAGT | 1 cut(s) | 190 |
| BfaI | CTAG | 5 cut(s) | 65, 156, 191, 266, 532 |
| BisI | GCNGC | 1 cut(s) | 479 |
| BlpI | GCTNAGC | 1 cut(s) | 183 |
| BlsI | GCNGC | 1 cut(s) | 480 |
| BmiI | GGNNCC | 5 cut(s) | 245, 259, 356, 368, 409 |
| BmrI | ACTGGG | 1 cut(s) | 327 |
| BmtI | GCTAGC | 1 cut(s) | 159 |
| BmuI | ACTGGG | 1 cut(s) | 327 |
| BpiI | GAAGAC | 2 cut(s) | 39, 159 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 183 |
| BsaI | GGTCTC | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 2 cut(s) | 26, 430 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 73, 103 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 380 |
| Bse1I | ACTGG | 2 cut(s) | 322, 358 |
| BseDI | CCNNGG | 2 cut(s) | 26, 430 |
| BseGI | GGATG | 1 cut(s) | 409 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 380 |
| BseNI | ACTGG | 2 cut(s) | 322, 358 |
| BseRI | GAGGAG | 1 cut(s) | 308 |
| BseSI | GKGCMC | 1 cut(s) | 246 |
| BseXI | GCAGC | 1 cut(s) | 465 |
| BsgI | GTGCAG | 1 cut(s) | 517 |
| Bsh1236I | CGCG | 1 cut(s) | 263 |
| BshNI | GGYRCC | 1 cut(s) | 243 |
| BslFI | GGGAC | 1 cut(s) | 54 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 380 |
| BsmAI | GTCTC | 1 cut(s) | 210 |
| BsmFI | GGGAC | 1 cut(s) | 54 |
| Bso31I | GGTCTC | 1 cut(s) | 210 |
| Bsp1286I | GDGCHC | 3 cut(s) | 246, 371, 412 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 183 |
| Bsp19I | CCATGG | 1 cut(s) | 430 |
| BspACI | CCGC | 2 cut(s) | 261, 374 |
| BspFNI | CGCG | 1 cut(s) | 263 |
| BspLI | GGNNCC | 5 cut(s) | 245, 259, 356, 368, 409 |
| BspOI | GCTAGC | 1 cut(s) | 159 |
| BspT107I | GGYRCC | 1 cut(s) | 243 |
| BspTNI | GGTCTC | 1 cut(s) | 210 |
| BsrI | ACTGG | 2 cut(s) | 322, 358 |
| BssECI | CCNNGG | 2 cut(s) | 26, 430 |
| BssT1I | CCWWGG | 2 cut(s) | 26, 430 |
| Bst4CI | ACNGT | 1 cut(s) | 15 |
| BstC8I | GCNNGC | 1 cut(s) | 157 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstDSI | CCRYGG | 1 cut(s) | 430 |
| BstF5I | GGATG | 1 cut(s) | 409 |
| BstFNI | CGCG | 1 cut(s) | 263 |
| BstHHI | GCGC | 1 cut(s) | 265 |
| BstMAI | GTCTC | 1 cut(s) | 210 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 269 |
| BstNSI | RCATGY | 1 cut(s) | 47 |
| BstSLI | GKGCMC | 1 cut(s) | 246 |
| BstUI | CGCG | 1 cut(s) | 263 |
| BstV1I | GCAGC | 1 cut(s) | 465 |
| BstV2I | GAAGAC | 2 cut(s) | 39, 159 |
| BtgI | CCRYGG | 1 cut(s) | 430 |
| BtsCI | GGATG | 1 cut(s) | 409 |
| Cac8I | GCNNGC | 1 cut(s) | 157 |
| CfoI | GCGC | 1 cut(s) | 265 |
| CviAII | CATG | 5 cut(s) | 44, 199, 280, 400, 431 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| Eco130I | CCWWGG | 2 cut(s) | 26, 430 |
| Eco24I | GRGCYC | 2 cut(s) | 371, 412 |
| Eco31I | GGTCTC | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 2 cut(s) | 26, 430 |
| EcoT38I | GRGCYC | 2 cut(s) | 371, 412 |
| ErhI | CCWWGG | 2 cut(s) | 26, 430 |
| FaeI | CATG | 5 cut(s) | 47, 202, 283, 403, 434 |
| FaiI | YATR | 8 cut(s) | 45, 52, 200, 211, 249, 281, 401, 432 |
| FaqI | GGGAC | 1 cut(s) | 54 |
| FatI | CATG | 5 cut(s) | 43, 198, 279, 399, 430 |
| Fnu4HI | GCNGC | 1 cut(s) | 479 |
| FokI | GGATG | 1 cut(s) | 416 |
| FriOI | GRGCYC | 2 cut(s) | 371, 412 |
| Fsp4HI | GCNGC | 1 cut(s) | 479 |
| FspBI | CTAG | 5 cut(s) | 65, 156, 191, 266, 532 |
| GlaI | GCGC | 1 cut(s) | 264 |
| GluI | GCNGC | 1 cut(s) | 479 |
| HhaI | GCGC | 1 cut(s) | 265 |
| Hin1II | CATG | 5 cut(s) | 47, 202, 283, 403, 434 |
| Hin6I | GCGC | 1 cut(s) | 263 |
| HinP1I | GCGC | 1 cut(s) | 263 |
| HphI | GGTGA | 1 cut(s) | 503 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188I | TCNGA | 1 cut(s) | 175 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| HpyAV | CCTTC | 4 cut(s) | 103, 337, 387, 526 |
| HpyCH4III | ACNGT | 1 cut(s) | 15 |
| HpyCH4IV | ACGT | 2 cut(s) | 508, 521 |
| HpyCH4V | TGCA | 1 cut(s) | 498 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 269 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| HpySE526I | ACGT | 2 cut(s) | 508, 521 |
| Hsp92II | CATG | 5 cut(s) | 47, 202, 283, 403, 434 |
| HspAI | GCGC | 1 cut(s) | 263 |
| LmnI | GCTCC | 3 cut(s) | 204, 366, 407 |
| LpnPI | CCDG | 7 cut(s) | 240, 261, 303, 353, 366, 371, 473 |
| Lsp1109I | GCAGC | 1 cut(s) | 465 |
| MaeI | CTAG | 5 cut(s) | 65, 156, 191, 266, 532 |
| MaeII | ACGT | 2 cut(s) | 508, 521 |
| MaeIII | GTNAC | 2 cut(s) | 509, 527 |
| MboII | GAAGA | 3 cut(s) | 44, 159, 162 |
| MfeI | CAATTG | 1 cut(s) | 230 |
| MhlI | GDGCHC | 3 cut(s) | 246, 371, 412 |
| MluCI | AATT | 2 cut(s) | 230, 469 |
| MmeI | TCCRAC | 1 cut(s) | 270 |
| MnlI | CCTC | 5 cut(s) | 72, 286, 340, 422, 428 |
| MroXI | GAANNNNTTC | 1 cut(s) | 256 |
| MseI | TTAA | 3 cut(s) | 102, 132, 417 |
| MslI | CAYNNNNRTG | 2 cut(s) | 392, 435 |
| MunI | CAATTG | 1 cut(s) | 230 |
| MvnI | CGCG | 1 cut(s) | 263 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 269 |
| NcoI | CCATGG | 1 cut(s) | 430 |
| NheI | GCTAGC | 1 cut(s) | 155 |
| NlaIII | CATG | 5 cut(s) | 47, 202, 283, 403, 434 |
| NlaIV | GGNNCC | 5 cut(s) | 245, 259, 356, 368, 409 |
| NmuCI | GTSAC | 1 cut(s) | 509 |
| NspI | RCATGY | 1 cut(s) | 47 |
| PciI | ACATGT | 1 cut(s) | 43 |
| PdmI | GAANNNNTTC | 1 cut(s) | 256 |
| PkrI | GCNGC | 1 cut(s) | 480 |
| PscI | ACATGT | 1 cut(s) | 43 |
| PspN4I | GGNNCC | 5 cut(s) | 245, 259, 356, 368, 409 |
| RseI | CAYNNNNRTG | 2 cut(s) | 392, 435 |
| SaqAI | TTAA | 3 cut(s) | 102, 132, 417 |
| SatI | GCNGC | 1 cut(s) | 479 |
| SduI | GDGCHC | 3 cut(s) | 246, 371, 412 |
| SetI | ASST | 9 cut(s) | 189, 209, 259, 332, 348, 439, 492, 511, 524 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 392, 435 |
| SpeI | ACTAGT | 1 cut(s) | 190 |
| Sse9I | AATT | 2 cut(s) | 230, 469 |
| SsiI | CCGC | 2 cut(s) | 261, 374 |
| SspI | AATATT | 1 cut(s) | 106 |
| SspMI | CTAG | 5 cut(s) | 65, 156, 191, 266, 532 |
| StyI | CCWWGG | 2 cut(s) | 26, 430 |
| TaaI | ACNGT | 1 cut(s) | 15 |
| TaiI | ACGT | 2 cut(s) | 511, 524 |
| TasI | AATT | 2 cut(s) | 230, 469 |
| Tru1I | TTAA | 3 cut(s) | 102, 132, 417 |
| Tru9I | TTAA | 3 cut(s) | 102, 132, 417 |
| TseFI | GTSAC | 1 cut(s) | 509 |
| TseI | GCWGC | 1 cut(s) | 478 |
| Tsp45I | GTSAC | 1 cut(s) | 509 |
| TspDTI | ATGAA | 3 cut(s) | 410, 474, 492 |
| XceI | RCATGY | 1 cut(s) | 47 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 236, 437 |
| XmnI | GAANNNNTTC | 1 cut(s) | 256 |
| XspI | CTAG | 5 cut(s) | 65, 156, 191, 266, 532 |