Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HSP20 | PF00011 | 50 - 153 | 2.4e-32 | Hsp20/alpha crystallin family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 297 |
| AciI | CCGC | 2 cut(s) | 255, 318 |
| AclWI | GGATC | 1 cut(s) | 152 |
| AcsI | RAATTY | 4 cut(s) | 16, 107, 121, 453 |
| AcuI | CTGAAG | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AgsI | TTSAA | 3 cut(s) | 181, 230, 452 |
| AjnI | CCWGG | 2 cut(s) | 112, 329 |
| AluBI | AGCT | 1 cut(s) | 361 |
| AluI | AGCT | 1 cut(s) | 361 |
| Alw26I | GTCTC | 1 cut(s) | 152 |
| AlwI | GGATC | 1 cut(s) | 152 |
| AoxI | GGCC | 1 cut(s) | 183 |
| ApeKI | GCWGC | 3 cut(s) | 244, 315, 377 |
| ApoI | RAATTY | 4 cut(s) | 16, 107, 121, 453 |
| AspS9I | GGNCC | 1 cut(s) | 55 |
| AsuC2I | CCSGG | 3 cut(s) | 142, 195, 302 |
| AsuHPI | GGTGA | 1 cut(s) | 436 |
| AvaII | GGWCC | 1 cut(s) | 55 |
| BanI | GGYRCC | 1 cut(s) | 297 |
| BbsI | GAAGAC | 1 cut(s) | 28 |
| BbvI | GCAGC | 3 cut(s) | 231, 327, 364 |
| BciT130I | CCWGG | 2 cut(s) | 114, 331 |
| BcnI | CCSGG | 3 cut(s) | 142, 195, 302 |
| BcoDI | GTCTC | 1 cut(s) | 152 |
| BfmI | CTRYAG | 1 cut(s) | 245 |
| BisI | GCNGC | 4 cut(s) | 245, 316, 319, 378 |
| BlsI | GCNGC | 4 cut(s) | 246, 317, 320, 379 |
| Bme1390I | CCNGG | 5 cut(s) | 114, 142, 195, 302, 331 |
| Bme18I | GGWCC | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 1 cut(s) | 55 |
| BmiI | GGNNCC | 3 cut(s) | 56, 57, 299 |
| BmrFI | CCNGG | 5 cut(s) | 114, 142, 195, 302, 331 |
| BpiI | GAAGAC | 1 cut(s) | 28 |
| BpmI | CTGGAG | 1 cut(s) | 313 |
| BpuMI | CCSGG | 3 cut(s) | 142, 195, 302 |
| BsaI | GGTCTC | 1 cut(s) | 152 |
| BsaJI | CCNNGG | 2 cut(s) | 194, 381 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| Bse1I | ACTGG | 1 cut(s) | 155 |
| BseBI | CCWGG | 2 cut(s) | 114, 331 |
| BseDI | CCNNGG | 2 cut(s) | 194, 381 |
| BseGI | GGATG | 1 cut(s) | 9 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseMII | CTCAG | 2 cut(s) | 339, 412 |
| BseNI | ACTGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 3 cut(s) | 231, 327, 364 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BshNI | GGYRCC | 1 cut(s) | 297 |
| BsiSI | CCGG | 3 cut(s) | 142, 194, 301 |
| BslFI | GGGAC | 1 cut(s) | 68 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsmAI | GTCTC | 1 cut(s) | 152 |
| BsmFI | GGGAC | 1 cut(s) | 68 |
| BsmI | GAATGC | 1 cut(s) | 358 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bso31I | GGTCTC | 1 cut(s) | 152 |
| Bsp143I | GATC | 3 cut(s) | 46, 144, 249 |
| Bsp19I | CCATGG | 1 cut(s) | 381 |
| BspACI | CCGC | 2 cut(s) | 255, 318 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspCNI | CTCAG | 2 cut(s) | 340, 411 |
| BspLI | GGNNCC | 3 cut(s) | 56, 57, 299 |
| BspMAI | CTGCAG | 1 cut(s) | 249 |
| BspPI | GGATC | 1 cut(s) | 152 |
| BspT107I | GGYRCC | 1 cut(s) | 297 |
| BspTNI | GGTCTC | 1 cut(s) | 152 |
| BsrI | ACTGG | 1 cut(s) | 155 |
| BssECI | CCNNGG | 2 cut(s) | 194, 381 |
| BssMI | GATC | 3 cut(s) | 46, 144, 249 |
| BssT1I | CCWWGG | 1 cut(s) | 381 |
| Bst2UI | CCWGG | 2 cut(s) | 114, 331 |
| Bst4CI | ACNGT | 1 cut(s) | 409 |
| Bst6I | CTCTTC | 2 cut(s) | 204, 422 |
| BstDEI | CTNAG | 2 cut(s) | 348, 398 |
| BstDSI | CCRYGG | 1 cut(s) | 381 |
| BstF5I | GGATG | 1 cut(s) | 9 |
| BstKTI | GATC | 3 cut(s) | 49, 147, 252 |
| BstMAI | GTCTC | 1 cut(s) | 152 |
| BstMBI | GATC | 3 cut(s) | 46, 144, 249 |
| BstNI | CCWGG | 2 cut(s) | 114, 331 |
| BstSCI | CCNGG | 5 cut(s) | 112, 140, 193, 300, 329 |
| BstSFI | CTRYAG | 1 cut(s) | 245 |
| BstV1I | GCAGC | 3 cut(s) | 231, 327, 364 |
| BstV2I | GAAGAC | 1 cut(s) | 28 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| BtgI | CCRYGG | 1 cut(s) | 381 |
| BtsCI | GGATG | 1 cut(s) | 9 |
| BtsIMutI | CAGTG | 1 cut(s) | 406 |
| Cfr13I | GGNCC | 1 cut(s) | 55 |
| CseI | GACGC | 1 cut(s) | 22 |
| CviAII | CATG | 2 cut(s) | 173, 382 |
| CviJI | RGCY | 8 cut(s) | 128, 170, 185, 199, 343, 361, 377, 462 |
| CviKI_1 | RGCY | 8 cut(s) | 128, 170, 185, 199, 343, 361, 377, 462 |
| DdeI | CTNAG | 2 cut(s) | 348, 398 |
| DpnI | GATC | 3 cut(s) | 48, 146, 251 |
| DpnII | GATC | 3 cut(s) | 46, 144, 249 |
| Eam1104I | CTCTTC | 2 cut(s) | 204, 422 |
| EarI | CTCTTC | 2 cut(s) | 204, 422 |
| Eco130I | CCWWGG | 1 cut(s) | 381 |
| Eco31I | GGTCTC | 1 cut(s) | 152 |
| Eco47I | GGWCC | 1 cut(s) | 55 |
| Eco57I | CTGAAG | 1 cut(s) | 221 |
| EcoO109I | RGGNCCY | 1 cut(s) | 55 |
| EcoRI | GAATTC | 1 cut(s) | 121 |
| EcoRII | CCWGG | 2 cut(s) | 112, 329 |
| EcoT14I | CCWWGG | 1 cut(s) | 381 |
| ErhI | CCWWGG | 1 cut(s) | 381 |
| FaeI | CATG | 2 cut(s) | 176, 385 |
| FaiI | YATR | 2 cut(s) | 174, 383 |
| FaqI | GGGAC | 1 cut(s) | 68 |
| FatI | CATG | 2 cut(s) | 172, 381 |
| Fnu4HI | GCNGC | 4 cut(s) | 245, 316, 319, 378 |
| Fsp4HI | GCNGC | 4 cut(s) | 245, 316, 319, 378 |
| GluI | GCNGC | 4 cut(s) | 245, 316, 319, 378 |
| GsuI | CTGGAG | 1 cut(s) | 313 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| HapII | CCGG | 3 cut(s) | 142, 194, 301 |
| HgaI | GACGC | 1 cut(s) | 22 |
| Hin1II | CATG | 2 cut(s) | 176, 385 |
| HindIII | AAGCTT | 1 cut(s) | 359 |
| HpaII | CCGG | 3 cut(s) | 142, 194, 301 |
| HphI | GGTGA | 1 cut(s) | 436 |
| Hpy188I | TCNGA | 3 cut(s) | 23, 414, 436 |
| Hpy188III | TCNNGA | 2 cut(s) | 307, 347 |
| Hpy99I | CGWCG | 1 cut(s) | 27 |
| HpyAV | CCTTC | 4 cut(s) | 90, 148, 200, 409 |
| HpyCH4III | ACNGT | 1 cut(s) | 409 |
| HpyCH4V | TGCA | 1 cut(s) | 247 |
| HpyF3I | CTNAG | 2 cut(s) | 348, 398 |
| Hsp92II | CATG | 2 cut(s) | 176, 385 |
| KflI | GGGWCCC | 1 cut(s) | 55 |
| Kzo9I | GATC | 3 cut(s) | 46, 144, 249 |
| Lsp1109I | GCAGC | 3 cut(s) | 231, 327, 364 |
| MaeIII | GTNAC | 1 cut(s) | 403 |
| MalI | GATC | 3 cut(s) | 48, 146, 251 |
| MboI | GATC | 3 cut(s) | 46, 144, 249 |
| MboII | GAAGA | 7 cut(s) | 28, 75, 214, 221, 242, 277, 439 |
| MluCI | AATT | 6 cut(s) | 16, 74, 107, 121, 369, 453 |
| MmeI | TCCRAC | 1 cut(s) | 46 |
| MnlI | CCTC | 7 cut(s) | 53, 205, 255, 271, 327, 415, 423 |
| MseI | TTAA | 1 cut(s) | 372 |
| MspA1I | CMGCKG | 2 cut(s) | 255, 318 |
| MspI | CCGG | 3 cut(s) | 142, 194, 301 |
| MspR9I | CCNGG | 5 cut(s) | 114, 142, 195, 302, 331 |
| Mva1269I | GAATGC | 1 cut(s) | 358 |
| MvaI | CCWGG | 2 cut(s) | 114, 331 |
| NciI | CCSGG | 3 cut(s) | 142, 195, 302 |
| NcoI | CCATGG | 1 cut(s) | 381 |
| NdeII | GATC | 3 cut(s) | 46, 144, 249 |
| NlaIII | CATG | 2 cut(s) | 176, 385 |
| NlaIV | GGNNCC | 3 cut(s) | 56, 57, 299 |
| NmuCI | GTSAC | 1 cut(s) | 403 |
| PctI | GAATGC | 1 cut(s) | 358 |
| PfoI | TCCNGGA | 1 cut(s) | 329 |
| PkrI | GCNGC | 4 cut(s) | 246, 317, 320, 379 |
| PpuMI | RGGWCCY | 1 cut(s) | 55 |
| Psp5II | RGGWCCY | 1 cut(s) | 55 |
| Psp6I | CCWGG | 2 cut(s) | 112, 329 |
| PspGI | CCWGG | 2 cut(s) | 112, 329 |
| PspN4I | GGNNCC | 3 cut(s) | 56, 57, 299 |
| PspPI | GGNCC | 1 cut(s) | 55 |
| PspPPI | RGGWCCY | 1 cut(s) | 55 |
| PstI | CTGCAG | 1 cut(s) | 249 |
| SaqAI | TTAA | 1 cut(s) | 372 |
| SatI | GCNGC | 4 cut(s) | 245, 316, 319, 378 |
| Sau3AI | GATC | 3 cut(s) | 46, 144, 249 |
| Sau96I | GGNCC | 1 cut(s) | 55 |
| ScrFI | CCNGG | 5 cut(s) | 114, 142, 195, 302, 331 |
| SetI | ASST | 8 cut(s) | 45, 192, 216, 222, 338, 363, 426, 434 |
| SfcI | CTRYAG | 1 cut(s) | 245 |
| SinI | GGWCC | 1 cut(s) | 55 |
| Sse9I | AATT | 6 cut(s) | 16, 74, 107, 121, 369, 453 |
| SsiI | CCGC | 2 cut(s) | 255, 318 |
| StyD4I | CCNGG | 5 cut(s) | 112, 140, 193, 300, 329 |
| StyI | CCWWGG | 1 cut(s) | 381 |
| TaaI | ACNGT | 1 cut(s) | 409 |
| TaqI | TCGA | 4 cut(s) | 39, 45, 147, 306 |
| TasI | AATT | 6 cut(s) | 16, 74, 107, 121, 369, 453 |
| TauI | GCSGC | 1 cut(s) | 321 |
| Tru1I | TTAA | 1 cut(s) | 372 |
| Tru9I | TTAA | 1 cut(s) | 372 |
| TscAI | CASTG | 1 cut(s) | 406 |
| TseFI | GTSAC | 1 cut(s) | 403 |
| TseI | GCWGC | 3 cut(s) | 244, 315, 377 |
| Tsp45I | GTSAC | 1 cut(s) | 403 |
| TspDTI | ATGAA | 3 cut(s) | 75, 121, 381 |
| TspRI | CASTG | 1 cut(s) | 406 |
| VpaK11BI | GGWCC | 1 cut(s) | 55 |
| XapI | RAATTY | 4 cut(s) | 16, 107, 121, 453 |