Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 57 - 107 | 3.9e-06 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 74 |
| AatII | GACGTC | 1 cut(s) | 134 |
| AciI | CCGC | 3 cut(s) | 101, 104, 107 |
| AcyI | GRCGYC | 1 cut(s) | 131 |
| AfaI | GTAC | 1 cut(s) | 306 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 23 |
| AgsI | TTSAA | 3 cut(s) | 34, 167, 181 |
| AluBI | AGCT | 3 cut(s) | 194, 207, 287 |
| AluI | AGCT | 3 cut(s) | 194, 207, 287 |
| Alw21I | GWGCWC | 2 cut(s) | 174, 322 |
| Alw44I | GTGCAC | 1 cut(s) | 170 |
| ApaLI | GTGCAC | 1 cut(s) | 170 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| AsuHPI | GGTGA | 4 cut(s) | 101, 126, 241, 247 |
| BaeGI | GKGCMC | 1 cut(s) | 174 |
| Bbv12I | GWGCWC | 2 cut(s) | 174, 322 |
| BbvI | GCAGC | 1 cut(s) | 203 |
| BccI | CCATC | 3 cut(s) | 21, 41, 148 |
| BfaI | CTAG | 2 cut(s) | 246, 308 |
| BisI | GCNGC | 3 cut(s) | 102, 105, 192 |
| BlpI | GCTNAGC | 1 cut(s) | 276 |
| BlsI | GCNGC | 3 cut(s) | 103, 106, 193 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 1 cut(s) | 242 |
| BsaBI | GATNNNNATC | 1 cut(s) | 396 |
| BsaHI | GRCGYC | 1 cut(s) | 131 |
| BsaWI | WCCGGW | 1 cut(s) | 16 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 23 |
| Bse3DI | GCAATG | 2 cut(s) | 57, 131 |
| Bse8I | GATNNNNATC | 1 cut(s) | 396 |
| BseGI | GGATG | 3 cut(s) | 32, 85, 382 |
| BseJI | GATNNNNATC | 1 cut(s) | 396 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BseMI | GCAATG | 2 cut(s) | 57, 131 |
| BseMII | CTCAG | 1 cut(s) | 290 |
| BseRI | GAGGAG | 1 cut(s) | 239 |
| BseSI | GKGCMC | 1 cut(s) | 174 |
| BseXI | GCAGC | 1 cut(s) | 203 |
| BsgI | GTGCAG | 1 cut(s) | 210 |
| BsiHKAI | GWGCWC | 2 cut(s) | 174, 322 |
| BsiSI | CCGG | 1 cut(s) | 17 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 23 |
| Bsp1286I | GDGCHC | 2 cut(s) | 174, 322 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 276 |
| BspACI | CCGC | 3 cut(s) | 101, 104, 107 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BsrDI | GCAATG | 2 cut(s) | 57, 131 |
| BssNI | GRCGYC | 1 cut(s) | 131 |
| Bst4CI | ACNGT | 1 cut(s) | 44 |
| BstACI | GRCGYC | 1 cut(s) | 131 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 317 |
| BstC8I | GCNNGC | 3 cut(s) | 64, 122, 174 |
| BstDEI | CTNAG | 1 cut(s) | 276 |
| BstF5I | GGATG | 3 cut(s) | 32, 85, 382 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 59, 317 |
| BstSLI | GKGCMC | 1 cut(s) | 174 |
| BstV1I | GCAGC | 1 cut(s) | 203 |
| BtsCI | GGATG | 3 cut(s) | 32, 85, 382 |
| BtsIMutI | CAGTG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 3 cut(s) | 64, 122, 174 |
| Csp6I | GTAC | 1 cut(s) | 305 |
| CviAII | CATG | 3 cut(s) | 143, 272, 302 |
| CviJI | RGCY | 6 cut(s) | 11, 66, 158, 194, 207, 287 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 66, 158, 194, 207, 287 |
| CviQI | GTAC | 1 cut(s) | 305 |
| DdeI | CTNAG | 1 cut(s) | 276 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 3 cut(s) | 146, 275, 305 |
| FaiI | YATR | 5 cut(s) | 74, 144, 218, 273, 303 |
| FatI | CATG | 3 cut(s) | 142, 271, 301 |
| Fnu4HI | GCNGC | 3 cut(s) | 102, 105, 192 |
| FokI | GGATG | 3 cut(s) | 39, 92, 389 |
| Fsp4HI | GCNGC | 3 cut(s) | 102, 105, 192 |
| FspBI | CTAG | 2 cut(s) | 246, 308 |
| GluI | GCNGC | 3 cut(s) | 102, 105, 192 |
| HapII | CCGG | 1 cut(s) | 17 |
| Hin1I | GRCGYC | 1 cut(s) | 131 |
| Hin1II | CATG | 3 cut(s) | 146, 275, 305 |
| HindIII | AAGCTT | 1 cut(s) | 205 |
| HinfI | GANTC | 4 cut(s) | 181, 238, 268, 337 |
| HpaII | CCGG | 1 cut(s) | 17 |
| HphI | GGTGA | 4 cut(s) | 101, 126, 241, 247 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 2 cut(s) | 243, 342 |
| Hpy188III | TCNNGA | 1 cut(s) | 362 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyAV | CCTTC | 1 cut(s) | 226 |
| HpyCH4III | ACNGT | 1 cut(s) | 44 |
| HpyCH4IV | ACGT | 1 cut(s) | 131 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 62, 124, 172, 191 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 59, 317 |
| HpyF3I | CTNAG | 1 cut(s) | 276 |
| HpySE526I | ACGT | 1 cut(s) | 131 |
| Hsp92I | GRCGYC | 1 cut(s) | 131 |
| Hsp92II | CATG | 3 cut(s) | 146, 275, 305 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 3 cut(s) | 8, 30, 48 |
| Lsp1109I | GCAGC | 1 cut(s) | 203 |
| MaeI | CTAG | 2 cut(s) | 246, 308 |
| MaeII | ACGT | 1 cut(s) | 131 |
| MaeIII | GTNAC | 2 cut(s) | 38, 132 |
| MhlI | GDGCHC | 2 cut(s) | 174, 322 |
| MluCI | AATT | 1 cut(s) | 149 |
| MlyI | GAGTC | 1 cut(s) | 346 |
| MnlI | CCTC | 3 cut(s) | 80, 217, 220 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 386, 403 |
| MspA1I | CMGCKG | 1 cut(s) | 194 |
| MspI | CCGG | 1 cut(s) | 17 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 59, 317 |
| NlaIII | CATG | 3 cut(s) | 146, 275, 305 |
| NmuCI | GTSAC | 1 cut(s) | 132 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PfeI | GAWTC | 3 cut(s) | 181, 238, 268 |
| PkrI | GCNGC | 3 cut(s) | 103, 106, 193 |
| PleI | GAGTC | 1 cut(s) | 345 |
| PpsI | GAGTC | 1 cut(s) | 345 |
| PsiI | TTATAA | 1 cut(s) | 74 |
| PvuII | CAGCTG | 1 cut(s) | 194 |
| RsaI | GTAC | 1 cut(s) | 306 |
| RsaNI | GTAC | 1 cut(s) | 305 |
| SaqAI | TTAA | 2 cut(s) | 386, 403 |
| SatI | GCNGC | 3 cut(s) | 102, 105, 192 |
| SchI | GAGTC | 1 cut(s) | 346 |
| SduI | GDGCHC | 2 cut(s) | 174, 322 |
| SetI | ASST | 9 cut(s) | 91, 118, 134, 196, 209, 231, 237, 266, 289 |
| SmlI | CTYRAG | 1 cut(s) | 221 |
| SmoI | CTYRAG | 1 cut(s) | 221 |
| Sse9I | AATT | 1 cut(s) | 149 |
| SsiI | CCGC | 3 cut(s) | 101, 104, 107 |
| SspMI | CTAG | 2 cut(s) | 246, 308 |
| TaaI | ACNGT | 1 cut(s) | 44 |
| TaiI | ACGT | 1 cut(s) | 134 |
| TasI | AATT | 1 cut(s) | 149 |
| TatI | WGTACW | 1 cut(s) | 304 |
| TauI | GCSGC | 2 cut(s) | 104, 107 |
| TfiI | GAWTC | 3 cut(s) | 181, 238, 268 |
| Tru1I | TTAA | 2 cut(s) | 386, 403 |
| Tru9I | TTAA | 2 cut(s) | 386, 403 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseFI | GTSAC | 1 cut(s) | 132 |
| TseI | GCWGC | 1 cut(s) | 191 |
| Tsp45I | GTSAC | 1 cut(s) | 132 |
| TspDTI | ATGAA | 1 cut(s) | 260 |
| TspRI | CASTG | 1 cut(s) | 49 |
| VneI | GTGCAC | 1 cut(s) | 170 |
| XspI | CTAG | 2 cut(s) | 246, 308 |
| ZraI | GACGTC | 1 cut(s) | 132 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |