ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 43 |
| Acc36I | ACCTGC | 1 cut(s) | 43 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 106 |
| AclWI | GGATC | 1 cut(s) | 264 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AflIII | ACRYGT | 2 cut(s) | 160, 187 |
| AluBI | AGCT | 1 cut(s) | 86 |
| AluI | AGCT | 1 cut(s) | 86 |
| AlwI | GGATC | 1 cut(s) | 264 |
| Ama87I | CYCGRG | 1 cut(s) | 333 |
| AvaI | CYCGRG | 1 cut(s) | 333 |
| BfaI | CTAG | 4 cut(s) | 83, 137, 237, 242 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BfuAI | ACCTGC | 1 cut(s) | 43 |
| BmeT110I | CYCGRG | 1 cut(s) | 333 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 101, 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseMII | CTCAG | 1 cut(s) | 111 |
| BsgI | GTGCAG | 1 cut(s) | 58 |
| BsiHKCI | CYCGRG | 1 cut(s) | 333 |
| BslFI | GGGAC | 1 cut(s) | 337 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmFI | GGGAC | 1 cut(s) | 337 |
| BsoBI | CYCGRG | 1 cut(s) | 333 |
| Bsp143I | GATC | 2 cut(s) | 244, 256 |
| BspCNI | CTCAG | 1 cut(s) | 112 |
| BspMI | ACCTGC | 1 cut(s) | 43 |
| BspPI | GGATC | 1 cut(s) | 264 |
| BssMI | GATC | 2 cut(s) | 244, 256 |
| Bst4CI | ACNGT | 1 cut(s) | 209 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 233 |
| BstC8I | GCNNGC | 1 cut(s) | 330 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstKTI | GATC | 2 cut(s) | 247, 259 |
| BstMBI | GATC | 2 cut(s) | 244, 256 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstNSI | RCATGY | 2 cut(s) | 164, 191 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstX2I | RGATCY | 1 cut(s) | 256 |
| BstYI | RGATCY | 1 cut(s) | 256 |
| BtsIMutI | CAGTG | 1 cut(s) | 214 |
| BveI | ACCTGC | 1 cut(s) | 43 |
| Cac8I | GCNNGC | 1 cut(s) | 330 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 192, 227 |
| CviAII | CATG | 3 cut(s) | 161, 188, 248 |
| CviJI | RGCY | 3 cut(s) | 86, 92, 275 |
| CviKI_1 | RGCY | 3 cut(s) | 86, 92, 275 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 2 cut(s) | 246, 258 |
| DpnII | GATC | 2 cut(s) | 244, 256 |
| Eco88I | CYCGRG | 1 cut(s) | 333 |
| FaeI | CATG | 3 cut(s) | 164, 191, 251 |
| FaiI | YATR | 7 cut(s) | 162, 189, 249, 287, 289, 291, 326 |
| FaqI | GGGAC | 1 cut(s) | 337 |
| FatI | CATG | 3 cut(s) | 160, 187, 247 |
| FspBI | CTAG | 4 cut(s) | 83, 137, 237, 242 |
| Hin1II | CATG | 3 cut(s) | 164, 191, 251 |
| HinfI | GANTC | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 2 cut(s) | 121, 132 |
| Hpy188III | TCNNGA | 3 cut(s) | 137, 197, 242 |
| HpyCH4III | ACNGT | 1 cut(s) | 209 |
| HpyCH4IV | ACGT | 2 cut(s) | 294, 350 |
| HpyCH4V | TGCA | 3 cut(s) | 75, 320, 364 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| HpySE526I | ACGT | 2 cut(s) | 294, 350 |
| Hsp92II | CATG | 3 cut(s) | 164, 191, 251 |
| Kzo9I | GATC | 2 cut(s) | 244, 256 |
| LpnPI | CCDG | 3 cut(s) | 14, 38, 327 |
| MaeI | CTAG | 4 cut(s) | 83, 137, 237, 242 |
| MaeII | ACGT | 2 cut(s) | 294, 350 |
| MalI | GATC | 2 cut(s) | 246, 258 |
| MboI | GATC | 2 cut(s) | 244, 256 |
| MflI | RGATCY | 1 cut(s) | 256 |
| MmeI | TCCRAC | 2 cut(s) | 26, 110 |
| MnlI | CCTC | 5 cut(s) | 103, 115, 265, 298, 365 |
| MseI | TTAA | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NdeII | GATC | 2 cut(s) | 244, 256 |
| NlaIII | CATG | 3 cut(s) | 164, 191, 251 |
| NspI | RCATGY | 2 cut(s) | 164, 191 |
| PaqCI | CACCTGC | 1 cut(s) | 43 |
| PciI | ACATGT | 2 cut(s) | 160, 187 |
| PfeI | GAWTC | 1 cut(s) | 133 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 106 |
| PscI | ACATGT | 2 cut(s) | 160, 187 |
| PsuI | RGATCY | 1 cut(s) | 256 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| Sau3AI | GATC | 2 cut(s) | 244, 256 |
| SetI | ASST | 8 cut(s) | 46, 57, 88, 126, 224, 297, 346, 353 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SspMI | CTAG | 4 cut(s) | 83, 137, 237, 242 |
| TaaI | ACNGT | 1 cut(s) | 209 |
| TaiI | ACGT | 2 cut(s) | 297, 353 |
| TaqI | TCGA | 2 cut(s) | 63, 184 |
| TfiI | GAWTC | 1 cut(s) | 133 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 214 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 106 |
| XbaI | TCTAGA | 2 cut(s) | 136, 241 |
| XceI | RCATGY | 2 cut(s) | 164, 191 |
| XspI | CTAG | 4 cut(s) | 83, 137, 237, 242 |