Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 305, 767 |
| AclWI | GGATC | 1 cut(s) | 559 |
| AcsI | RAATTY | 1 cut(s) | 523 |
| AcuI | CTGAAG | 1 cut(s) | 639 |
| AfaI | GTAC | 1 cut(s) | 433 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 666 |
| AgsI | TTSAA | 3 cut(s) | 115, 371, 743 |
| AhlI | ACTAGT | 1 cut(s) | 82 |
| AjiI | CACGTC | 1 cut(s) | 465 |
| Alw21I | GWGCWC | 1 cut(s) | 415 |
| Alw26I | GTCTC | 1 cut(s) | 50 |
| AlwI | GGATC | 1 cut(s) | 559 |
| Ama87I | CYCGRG | 1 cut(s) | 21 |
| AoxI | GGCC | 1 cut(s) | 69 |
| ApeKI | GCWGC | 1 cut(s) | 708 |
| ApoI | RAATTY | 1 cut(s) | 523 |
| AsuC2I | CCSGG | 1 cut(s) | 76 |
| AsuII | TTCGAA | 1 cut(s) | 521 |
| AsuNHI | GCTAGC | 1 cut(s) | 541 |
| AvaI | CYCGRG | 1 cut(s) | 21 |
| BauI | CACGAG | 1 cut(s) | 435 |
| BbsI | GAAGAC | 1 cut(s) | 467 |
| Bbv12I | GWGCWC | 1 cut(s) | 415 |
| BbvI | GCAGC | 1 cut(s) | 695 |
| BccI | CCATC | 3 cut(s) | 166, 698, 722 |
| BcnI | CCSGG | 1 cut(s) | 76 |
| BcoDI | GTCTC | 1 cut(s) | 50 |
| BcuI | ACTAGT | 1 cut(s) | 82 |
| BfaI | CTAG | 5 cut(s) | 83, 197, 542, 584, 687 |
| BisI | GCNGC | 1 cut(s) | 709 |
| BlsI | GCNGC | 1 cut(s) | 710 |
| BmcAI | AGTACT | 1 cut(s) | 433 |
| Bme1390I | CCNGG | 1 cut(s) | 76 |
| BmeT110I | CYCGRG | 1 cut(s) | 21 |
| BmgBI | CACGTC | 1 cut(s) | 465 |
| BmiI | GGNNCC | 1 cut(s) | 625 |
| BmrFI | CCNGG | 1 cut(s) | 76 |
| BmsI | GCATC | 1 cut(s) | 344 |
| BmtI | GCTAGC | 1 cut(s) | 545 |
| BpiI | GAAGAC | 1 cut(s) | 467 |
| Bpu14I | TTCGAA | 1 cut(s) | 521 |
| BpuMI | CCSGG | 1 cut(s) | 76 |
| BsaAI | YACGTR | 1 cut(s) | 214 |
| BsaI | GGTCTC | 1 cut(s) | 50 |
| BsaWI | WCCGGW | 1 cut(s) | 759 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 392, 421, 422, 451 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 666 |
| BseGI | GGATG | 2 cut(s) | 136, 733 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 666 |
| BseRI | GAGGAG | 1 cut(s) | 633 |
| BseXI | GCAGC | 1 cut(s) | 695 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BsiHKAI | GWGCWC | 1 cut(s) | 415 |
| BsiHKCI | CYCGRG | 1 cut(s) | 21 |
| BsiSI | CCGG | 2 cut(s) | 75, 760 |
| BslFI | GGGAC | 1 cut(s) | 322 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 666 |
| BsmAI | GTCTC | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 322 |
| BsmI | GAATGC | 2 cut(s) | 475, 640 |
| BsnI | GGCC | 1 cut(s) | 71 |
| Bso31I | GGTCTC | 1 cut(s) | 50 |
| BsoBI | CYCGRG | 1 cut(s) | 21 |
| Bsp119I | TTCGAA | 1 cut(s) | 521 |
| Bsp1286I | GDGCHC | 1 cut(s) | 415 |
| Bsp143I | GATC | 1 cut(s) | 564 |
| BspACI | CCGC | 2 cut(s) | 305, 767 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspLI | GGNNCC | 1 cut(s) | 625 |
| BspOI | GCTAGC | 1 cut(s) | 545 |
| BspPI | GGATC | 1 cut(s) | 559 |
| BspT104I | TTCGAA | 1 cut(s) | 521 |
| BspTNI | GGTCTC | 1 cut(s) | 50 |
| BssMI | GATC | 1 cut(s) | 564 |
| BssSI | CACGAG | 1 cut(s) | 435 |
| Bst2BI | CACGAG | 1 cut(s) | 435 |
| BstBAI | YACGTR | 1 cut(s) | 214 |
| BstBI | TTCGAA | 1 cut(s) | 521 |
| BstC8I | GCNNGC | 3 cut(s) | 415, 543, 552 |
| BstDEI | CTNAG | 1 cut(s) | 296 |
| BstF5I | GGATG | 2 cut(s) | 136, 733 |
| BstKTI | GATC | 1 cut(s) | 567 |
| BstMAI | GTCTC | 1 cut(s) | 50 |
| BstMBI | GATC | 1 cut(s) | 564 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 542, 547, 551, 556 |
| BstSCI | CCNGG | 1 cut(s) | 74 |
| BstV1I | GCAGC | 1 cut(s) | 695 |
| BstV2I | GAAGAC | 1 cut(s) | 467 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| BtrI | CACGTC | 1 cut(s) | 465 |
| BtsCI | GGATG | 2 cut(s) | 136, 733 |
| Cac8I | GCNNGC | 3 cut(s) | 415, 543, 552 |
| Csp6I | GTAC | 1 cut(s) | 432 |
| CviAII | CATG | 6 cut(s) | 14, 185, 279, 358, 555, 647 |
| CviJI | RGCY | 3 cut(s) | 71, 233, 708 |
| CviKI_1 | RGCY | 3 cut(s) | 71, 233, 708 |
| CviQI | GTAC | 1 cut(s) | 432 |
| DdeI | CTNAG | 1 cut(s) | 296 |
| DpnI | GATC | 1 cut(s) | 566 |
| DpnII | GATC | 1 cut(s) | 564 |
| Eco147I | AGGCCT | 1 cut(s) | 71 |
| Eco31I | GGTCTC | 1 cut(s) | 50 |
| Eco57I | CTGAAG | 1 cut(s) | 639 |
| Eco88I | CYCGRG | 1 cut(s) | 21 |
| FaeI | CATG | 6 cut(s) | 17, 188, 282, 361, 558, 650 |
| FaqI | GGGAC | 1 cut(s) | 322 |
| FatI | CATG | 6 cut(s) | 13, 184, 278, 357, 554, 646 |
| FauI | CCCGC | 1 cut(s) | 298 |
| Fnu4HI | GCNGC | 1 cut(s) | 709 |
| FokI | GGATG | 2 cut(s) | 143, 740 |
| Fsp4HI | GCNGC | 1 cut(s) | 709 |
| FspBI | CTAG | 5 cut(s) | 83, 197, 542, 584, 687 |
| GluI | GCNGC | 1 cut(s) | 709 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| HapII | CCGG | 2 cut(s) | 75, 760 |
| Hin1II | CATG | 6 cut(s) | 17, 188, 282, 361, 558, 650 |
| HinfI | GANTC | 3 cut(s) | 451, 514, 763 |
| HpaII | CCGG | 2 cut(s) | 75, 760 |
| Hpy188I | TCNGA | 4 cut(s) | 130, 171, 513, 754 |
| Hpy188III | TCNNGA | 4 cut(s) | 23, 251, 437, 617 |
| HpyAV | CCTTC | 3 cut(s) | 585, 614, 666 |
| HpyCH4IV | ACGT | 3 cut(s) | 213, 236, 464 |
| HpyCH4V | TGCA | 2 cut(s) | 139, 184 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 542, 547, 551, 556 |
| HpyF3I | CTNAG | 1 cut(s) | 296 |
| HpySE526I | ACGT | 3 cut(s) | 213, 236, 464 |
| Hsp92II | CATG | 6 cut(s) | 17, 188, 282, 361, 558, 650 |
| Kzo9I | GATC | 1 cut(s) | 564 |
| LmnI | GCTCC | 1 cut(s) | 400 |
| LpnPI | CCDG | 4 cut(s) | 88, 536, 630, 773 |
| Lsp1109I | GCAGC | 1 cut(s) | 695 |
| LweI | GCATC | 1 cut(s) | 344 |
| MaeI | CTAG | 5 cut(s) | 83, 197, 542, 584, 687 |
| MaeII | ACGT | 3 cut(s) | 213, 236, 464 |
| MaeIII | GTNAC | 1 cut(s) | 342 |
| MalI | GATC | 1 cut(s) | 566 |
| MboI | GATC | 1 cut(s) | 564 |
| MboII | GAAGA | 4 cut(s) | 144, 460, 472, 570 |
| MfeI | CAATTG | 1 cut(s) | 371 |
| MhlI | GDGCHC | 1 cut(s) | 415 |
| MluCI | AATT | 5 cut(s) | 28, 88, 371, 500, 523 |
| MlyI | GAGTC | 1 cut(s) | 523 |
| MmeI | TCCRAC | 1 cut(s) | 252 |
| MnlI | CCTC | 7 cut(s) | 82, 127, 172, 268, 438, 484, 654 |
| MseI | TTAA | 2 cut(s) | 528, 570 |
| MslI | CAYNNNNRTG | 2 cut(s) | 326, 362 |
| MspI | CCGG | 2 cut(s) | 75, 760 |
| MspR9I | CCNGG | 1 cut(s) | 76 |
| MunI | CAATTG | 1 cut(s) | 371 |
| Mva1269I | GAATGC | 2 cut(s) | 475, 640 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 542, 547, 551, 556 |
| NciI | CCSGG | 1 cut(s) | 76 |
| NdeII | GATC | 1 cut(s) | 564 |
| NheI | GCTAGC | 1 cut(s) | 541 |
| NlaIII | CATG | 6 cut(s) | 17, 188, 282, 361, 558, 650 |
| NlaIV | GGNNCC | 1 cut(s) | 625 |
| NspV | TTCGAA | 1 cut(s) | 521 |
| PceI | AGGCCT | 1 cut(s) | 71 |
| PctI | GAATGC | 2 cut(s) | 475, 640 |
| PfeI | GAWTC | 2 cut(s) | 451, 763 |
| PkrI | GCNGC | 1 cut(s) | 710 |
| PleI | GAGTC | 1 cut(s) | 522 |
| PpsI | GAGTC | 1 cut(s) | 522 |
| Ppu21I | YACGTR | 1 cut(s) | 214 |
| PspN4I | GGNNCC | 1 cut(s) | 625 |
| RsaI | GTAC | 1 cut(s) | 433 |
| RsaNI | GTAC | 1 cut(s) | 432 |
| RseI | CAYNNNNRTG | 2 cut(s) | 326, 362 |
| SaqAI | TTAA | 2 cut(s) | 528, 570 |
| SatI | GCNGC | 1 cut(s) | 709 |
| Sau3AI | GATC | 1 cut(s) | 564 |
| ScaI | AGTACT | 1 cut(s) | 433 |
| SchI | GAGTC | 1 cut(s) | 523 |
| ScrFI | CCNGG | 1 cut(s) | 76 |
| SduI | GDGCHC | 1 cut(s) | 415 |
| SfaNI | GCATC | 1 cut(s) | 344 |
| SfuI | TTCGAA | 1 cut(s) | 521 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 326, 362 |
| SpeI | ACTAGT | 1 cut(s) | 82 |
| Sse9I | AATT | 5 cut(s) | 28, 88, 371, 500, 523 |
| SseBI | AGGCCT | 1 cut(s) | 71 |
| SsiI | CCGC | 2 cut(s) | 305, 767 |
| SspI | AATATT | 1 cut(s) | 747 |
| SspMI | CTAG | 5 cut(s) | 83, 197, 542, 584, 687 |
| StuI | AGGCCT | 1 cut(s) | 71 |
| StyD4I | CCNGG | 1 cut(s) | 74 |
| TaiI | ACGT | 3 cut(s) | 216, 239, 467 |
| TaqI | TCGA | 2 cut(s) | 325, 521 |
| TasI | AATT | 5 cut(s) | 28, 88, 371, 500, 523 |
| TatI | WGTACW | 1 cut(s) | 431 |
| TfiI | GAWTC | 2 cut(s) | 451, 763 |
| Tru1I | TTAA | 2 cut(s) | 528, 570 |
| Tru9I | TTAA | 2 cut(s) | 528, 570 |
| TseI | GCWGC | 1 cut(s) | 708 |
| TspDTI | ATGAA | 2 cut(s) | 201, 443 |
| TspGWI | ACGGA | 1 cut(s) | 326 |
| XapI | RAATTY | 1 cut(s) | 523 |
| XspI | CTAG | 5 cut(s) | 83, 197, 542, 584, 687 |
| ZrmI | AGTACT | 1 cut(s) | 433 |