Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 2 - 82 | 6.9e-12 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 179 |
| AgsI | TTSAA | 1 cut(s) | 107 |
| AluBI | AGCT | 2 cut(s) | 232, 236 |
| AluI | AGCT | 2 cut(s) | 232, 236 |
| Alw26I | GTCTC | 1 cut(s) | 68 |
| AsuHPI | GGTGA | 2 cut(s) | 51, 128 |
| AsuNHI | GCTAGC | 1 cut(s) | 232 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 114, 147 |
| BciVI | GTATCC | 1 cut(s) | 115 |
| BcoDI | GTCTC | 1 cut(s) | 68 |
| BfaI | CTAG | 1 cut(s) | 233 |
| BfuI | GTATCC | 1 cut(s) | 115 |
| BmtI | GCTAGC | 1 cut(s) | 236 |
| BpmI | CTGGAG | 1 cut(s) | 273 |
| Bse1I | ACTGG | 1 cut(s) | 290 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseNI | ACTGG | 1 cut(s) | 290 |
| BslFI | GGGAC | 1 cut(s) | 269 |
| BsmAI | GTCTC | 1 cut(s) | 68 |
| BsmFI | GGGAC | 1 cut(s) | 269 |
| BspACI | CCGC | 1 cut(s) | 179 |
| BspOI | GCTAGC | 1 cut(s) | 236 |
| BsrI | ACTGG | 1 cut(s) | 290 |
| Bst4CI | ACNGT | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 2 cut(s) | 31, 234 |
| BstDEI | CTNAG | 1 cut(s) | 43 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstMAI | GTCTC | 1 cut(s) | 68 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 30, 242 |
| BsuI | GTATCC | 1 cut(s) | 115 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| Cac8I | GCNNGC | 2 cut(s) | 31, 234 |
| CviAII | CATG | 1 cut(s) | 197 |
| CviJI | RGCY | 8 cut(s) | 11, 17, 29, 41, 101, 164, 232, 236 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 17, 29, 41, 101, 164, 232, 236 |
| DdeI | CTNAG | 1 cut(s) | 43 |
| Eco32I | GATATC | 1 cut(s) | 154 |
| EcoRV | GATATC | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 200 |
| FaiI | YATR | 5 cut(s) | 198, 204, 228, 240, 248 |
| FaqI | GGGAC | 1 cut(s) | 269 |
| FatI | CATG | 1 cut(s) | 196 |
| FauI | CCCGC | 1 cut(s) | 172 |
| FokI | GGATG | 1 cut(s) | 293 |
| FspBI | CTAG | 1 cut(s) | 233 |
| GsuI | CTGGAG | 1 cut(s) | 273 |
| Hin1II | CATG | 1 cut(s) | 200 |
| HinfI | GANTC | 1 cut(s) | 209 |
| HphI | GGTGA | 2 cut(s) | 51, 128 |
| HpyCH4III | ACNGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 1 cut(s) | 262 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 30, 242 |
| HpyF3I | CTNAG | 1 cut(s) | 43 |
| Hsp92II | CATG | 1 cut(s) | 200 |
| LpnPI | CCDG | 7 cut(s) | 3, 47, 75, 83, 146, 240, 303 |
| MaeI | CTAG | 1 cut(s) | 233 |
| MaeIII | GTNAC | 3 cut(s) | 57, 64, 311 |
| MluCI | AATT | 1 cut(s) | 316 |
| MnlI | CCTC | 4 cut(s) | 106, 112, 181, 297 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 30, 242 |
| NheI | GCTAGC | 1 cut(s) | 232 |
| NlaIII | CATG | 1 cut(s) | 200 |
| NmuCI | GTSAC | 1 cut(s) | 57 |
| PfeI | GAWTC | 1 cut(s) | 209 |
| SetI | ASST | 4 cut(s) | 64, 173, 234, 238 |
| Sse9I | AATT | 1 cut(s) | 316 |
| SsiI | CCGC | 1 cut(s) | 179 |
| SspMI | CTAG | 1 cut(s) | 233 |
| TaaI | ACNGT | 1 cut(s) | 90 |
| TasI | AATT | 1 cut(s) | 316 |
| TfiI | GAWTC | 1 cut(s) | 209 |
| TseFI | GTSAC | 1 cut(s) | 57 |
| Tsp45I | GTSAC | 1 cut(s) | 57 |
| TspDTI | ATGAA | 2 cut(s) | 41, 315 |
| XspI | CTAG | 1 cut(s) | 233 |