zinc-binding in reverse transcriptase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 155 |
| AccII | CGCG | 1 cut(s) | 924 |
| AciI | CCGC | 3 cut(s) | 597, 626, 986 |
| AclWI | GGATC | 3 cut(s) | 32, 886, 1015 |
| AcoI | YGGCCR | 2 cut(s) | 249, 333 |
| AcyI | GRCGYC | 1 cut(s) | 927 |
| AfaI | GTAC | 2 cut(s) | 140, 609 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 18, 19, 820 |
| AflII | CTTAAG | 1 cut(s) | 641 |
| AflIII | ACRYGT | 1 cut(s) | 784 |
| AgsI | TTSAA | 2 cut(s) | 293, 399 |
| AluBI | AGCT | 7 cut(s) | 86, 367, 536, 542, 584, 714, 739 |
| AluI | AGCT | 7 cut(s) | 86, 367, 536, 542, 584, 714, 739 |
| Alw26I | GTCTC | 3 cut(s) | 361, 444, 775 |
| AlwI | GGATC | 3 cut(s) | 32, 886, 1015 |
| Ama87I | CYCGRG | 2 cut(s) | 18, 600 |
| AoxI | GGCC | 3 cut(s) | 249, 333, 1073 |
| ApeKI | GCWGC | 3 cut(s) | 275, 364, 584 |
| AspLEI | GCGC | 1 cut(s) | 692 |
| AspS9I | GGNCC | 1 cut(s) | 1073 |
| AsuC2I | CCSGG | 1 cut(s) | 707 |
| AsuHPI | GGTGA | 5 cut(s) | 188, 196, 877, 974, 1094 |
| AsuII | TTCGAA | 1 cut(s) | 801 |
| AvaI | CYCGRG | 2 cut(s) | 18, 600 |
| BalI | TGGCCA | 2 cut(s) | 251, 335 |
| BbsI | GAAGAC | 1 cut(s) | 846 |
| BbvI | GCAGC | 3 cut(s) | 262, 376, 571 |
| BccI | CCATC | 5 cut(s) | 609, 848, 904, 987, 1019 |
| BcnI | CCSGG | 1 cut(s) | 707 |
| BcoDI | GTCTC | 3 cut(s) | 361, 444, 775 |
| BfaI | CTAG | 2 cut(s) | 122, 581 |
| BfmI | CTRYAG | 5 cut(s) | 276, 362, 537, 670, 815 |
| BfoI | RGCGCY | 1 cut(s) | 693 |
| BfrI | CTTAAG | 1 cut(s) | 641 |
| BisI | GCNGC | 3 cut(s) | 276, 365, 585 |
| BlsI | GCNGC | 3 cut(s) | 277, 366, 586 |
| Bme1390I | CCNGG | 1 cut(s) | 707 |
| BmeT110I | CYCGRG | 2 cut(s) | 18, 600 |
| BmgT120I | GGNCC | 1 cut(s) | 1073 |
| BmrFI | CCNGG | 1 cut(s) | 707 |
| BmsI | GCATC | 2 cut(s) | 225, 249 |
| BpiI | GAAGAC | 1 cut(s) | 846 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 27, 59 |
| BpmI | CTGGAG | 2 cut(s) | 434, 888 |
| Bpu14I | TTCGAA | 1 cut(s) | 801 |
| BpuEI | CTTGAG | 2 cut(s) | 734, 816 |
| BpuMI | CCSGG | 1 cut(s) | 707 |
| BsaHI | GRCGYC | 1 cut(s) | 927 |
| BsaI | GGTCTC | 1 cut(s) | 361 |
| BsaJI | CCNNGG | 1 cut(s) | 336 |
| BsaWI | WCCGGW | 1 cut(s) | 328 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 18, 19, 820 |
| Bse1I | ACTGG | 2 cut(s) | 524, 905 |
| Bse3DI | GCAATG | 1 cut(s) | 501 |
| BseDI | CCNNGG | 1 cut(s) | 336 |
| BseGI | GGATG | 1 cut(s) | 1011 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 18, 19, 820 |
| BseMI | GCAATG | 1 cut(s) | 501 |
| BseMII | CTCAG | 2 cut(s) | 455, 530 |
| BseNI | ACTGG | 2 cut(s) | 524, 905 |
| BseRI | GAGGAG | 1 cut(s) | 699 |
| BseXI | GCAGC | 3 cut(s) | 262, 376, 571 |
| BseYI | CCCAGC | 2 cut(s) | 692, 959 |
| Bsh1236I | CGCG | 1 cut(s) | 924 |
| BshFI | GGCC | 3 cut(s) | 251, 335, 1075 |
| BsiHKCI | CYCGRG | 2 cut(s) | 18, 600 |
| BsiSI | CCGG | 2 cut(s) | 329, 706 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 18, 19, 820 |
| BsmAI | GTCTC | 3 cut(s) | 361, 444, 775 |
| BsnI | GGCC | 3 cut(s) | 251, 335, 1075 |
| Bso31I | GGTCTC | 1 cut(s) | 361 |
| BsoBI | CYCGRG | 2 cut(s) | 18, 600 |
| Bsp119I | TTCGAA | 1 cut(s) | 801 |
| Bsp143I | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| Bsp68I | TCGCGA | 1 cut(s) | 924 |
| BspACI | CCGC | 3 cut(s) | 597, 626, 986 |
| BspANI | GGCC | 3 cut(s) | 251, 335, 1075 |
| BspCNI | CTCAG | 2 cut(s) | 454, 529 |
| BspFNI | CGCG | 1 cut(s) | 924 |
| BspHI | TCATGA | 1 cut(s) | 456 |
| BspMAI | CTGCAG | 2 cut(s) | 280, 366 |
| BspPI | GGATC | 3 cut(s) | 32, 886, 1015 |
| BspT104I | TTCGAA | 1 cut(s) | 801 |
| BspTI | CTTAAG | 1 cut(s) | 641 |
| BspTNI | GGTCTC | 1 cut(s) | 361 |
| BsrDI | GCAATG | 1 cut(s) | 501 |
| BsrI | ACTGG | 2 cut(s) | 524, 905 |
| BssECI | CCNNGG | 1 cut(s) | 336 |
| BssMI | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| BssNAI | GTATAC | 1 cut(s) | 156 |
| BssNI | GRCGYC | 1 cut(s) | 927 |
| BssT1I | CCWWGG | 1 cut(s) | 336 |
| Bst1107I | GTATAC | 1 cut(s) | 156 |
| Bst4CI | ACNGT | 3 cut(s) | 77, 819, 845 |
| BstACI | GRCGYC | 1 cut(s) | 927 |
| BstAFI | CTTAAG | 1 cut(s) | 641 |
| BstBI | TTCGAA | 1 cut(s) | 801 |
| BstC8I | GCNNGC | 3 cut(s) | 626, 965, 1090 |
| BstDEI | CTNAG | 2 cut(s) | 441, 516 |
| BstF5I | GGATG | 1 cut(s) | 1011 |
| BstFNI | CGCG | 1 cut(s) | 924 |
| BstH2I | RGCGCY | 1 cut(s) | 693 |
| BstHHI | GCGC | 1 cut(s) | 692 |
| BstKTI | GATC | 5 cut(s) | 40, 93, 894, 1002, 1023 |
| BstMAI | GTCTC | 3 cut(s) | 361, 444, 775 |
| BstMBI | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 373, 520, 696 |
| BstNSI | RCATGY | 2 cut(s) | 232, 788 |
| BstSCI | CCNGG | 1 cut(s) | 705 |
| BstSFI | CTRYAG | 5 cut(s) | 276, 362, 537, 670, 815 |
| BstUI | CGCG | 1 cut(s) | 924 |
| BstV1I | GCAGC | 3 cut(s) | 262, 376, 571 |
| BstV2I | GAAGAC | 1 cut(s) | 846 |
| BstX2I | RGATCY | 1 cut(s) | 37 |
| BstYI | RGATCY | 1 cut(s) | 37 |
| BstZ17I | GTATAC | 1 cut(s) | 156 |
| BsuRI | GGCC | 3 cut(s) | 251, 335, 1075 |
| BtsCI | GGATG | 1 cut(s) | 1011 |
| BtuMI | TCGCGA | 1 cut(s) | 924 |
| Cac8I | GCNNGC | 3 cut(s) | 626, 965, 1090 |
| CciI | TCATGA | 1 cut(s) | 456 |
| CfoI | GCGC | 1 cut(s) | 692 |
| Cfr13I | GGNCC | 1 cut(s) | 1073 |
| CseI | GACGC | 1 cut(s) | 935 |
| Csp6I | GTAC | 2 cut(s) | 139, 608 |
| CviAII | CATG | 6 cut(s) | 229, 253, 308, 457, 778, 785 |
| CviQI | GTAC | 2 cut(s) | 139, 608 |
| DdeI | CTNAG | 2 cut(s) | 441, 516 |
| DpnI | GATC | 5 cut(s) | 39, 92, 893, 1001, 1022 |
| DpnII | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| EaeI | YGGCCR | 2 cut(s) | 249, 333 |
| Eco130I | CCWWGG | 1 cut(s) | 336 |
| Eco31I | GGTCTC | 1 cut(s) | 361 |
| Eco32I | GATATC | 1 cut(s) | 25 |
| Eco88I | CYCGRG | 2 cut(s) | 18, 600 |
| EcoRV | GATATC | 1 cut(s) | 25 |
| EcoT14I | CCWWGG | 1 cut(s) | 336 |
| ErhI | CCWWGG | 1 cut(s) | 336 |
| FaeI | CATG | 6 cut(s) | 232, 256, 311, 460, 781, 788 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 723, 755 |
| FatI | CATG | 6 cut(s) | 228, 252, 307, 456, 777, 784 |
| FauI | CCCGC | 2 cut(s) | 633, 993 |
| FauNDI | CATATG | 1 cut(s) | 160 |
| FblI | GTMKAC | 1 cut(s) | 155 |
| Fnu4HI | GCNGC | 3 cut(s) | 276, 365, 585 |
| FokI | GGATG | 1 cut(s) | 998 |
| Fsp4HI | GCNGC | 3 cut(s) | 276, 365, 585 |
| FspBI | CTAG | 2 cut(s) | 122, 581 |
| GlaI | GCGC | 1 cut(s) | 691 |
| GluI | GCNGC | 3 cut(s) | 276, 365, 585 |
| GsaI | CCCAGC | 2 cut(s) | 696, 963 |
| GsuI | CTGGAG | 2 cut(s) | 434, 888 |
| HaeII | RGCGCY | 1 cut(s) | 693 |
| HaeIII | GGCC | 3 cut(s) | 251, 335, 1075 |
| HapII | CCGG | 2 cut(s) | 329, 706 |
| HgaI | GACGC | 1 cut(s) | 935 |
| HhaI | GCGC | 1 cut(s) | 692 |
| Hin1I | GRCGYC | 1 cut(s) | 927 |
| Hin1II | CATG | 6 cut(s) | 232, 256, 311, 460, 781, 788 |
| Hin6I | GCGC | 1 cut(s) | 690 |
| HinP1I | GCGC | 1 cut(s) | 690 |
| HincII | GTYRAC | 2 cut(s) | 226, 529 |
| HindII | GTYRAC | 2 cut(s) | 226, 529 |
| HinfI | GANTC | 1 cut(s) | 574 |
| HpaII | CCGG | 2 cut(s) | 329, 706 |
| HphI | GGTGA | 5 cut(s) | 188, 196, 877, 974, 1094 |
| Hpy166II | GTNNAC | 5 cut(s) | 156, 187, 226, 529, 910 |
| Hpy188I | TCNGA | 3 cut(s) | 29, 90, 917 |
| Hpy188III | TCNNGA | 6 cut(s) | 20, 457, 751, 833, 923, 1047 |
| Hpy8I | GTNNAC | 5 cut(s) | 156, 187, 226, 529, 910 |
| Hpy99I | CGWCG | 1 cut(s) | 929 |
| HpyAV | CCTTC | 3 cut(s) | 175, 650, 1034 |
| HpyCH4III | ACNGT | 3 cut(s) | 77, 819, 845 |
| HpyCH4IV | ACGT | 1 cut(s) | 882 |
| HpyCH4V | TGCA | 8 cut(s) | 232, 238, 256, 262, 278, 364, 494, 1033 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 373, 520, 696 |
| HpyF3I | CTNAG | 2 cut(s) | 441, 516 |
| HpySE526I | ACGT | 1 cut(s) | 882 |
| Hsp92I | GRCGYC | 1 cut(s) | 927 |
| Hsp92II | CATG | 6 cut(s) | 232, 256, 311, 460, 781, 788 |
| HspAI | GCGC | 1 cut(s) | 690 |
| Kzo9I | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| LmnI | GCTCC | 1 cut(s) | 736 |
| Lsp1109I | GCAGC | 3 cut(s) | 262, 376, 571 |
| LweI | GCATC | 2 cut(s) | 225, 249 |
| MaeI | CTAG | 2 cut(s) | 122, 581 |
| MaeII | ACGT | 1 cut(s) | 882 |
| MaeIII | GTNAC | 4 cut(s) | 7, 103, 806, 883 |
| MalI | GATC | 5 cut(s) | 39, 92, 893, 1001, 1022 |
| MboI | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| MboII | GAAGA | 3 cut(s) | 493, 518, 851 |
| MflI | RGATCY | 1 cut(s) | 37 |
| MlsI | TGGCCA | 2 cut(s) | 251, 335 |
| MluCI | AATT | 1 cut(s) | 826 |
| MluNI | TGGCCA | 2 cut(s) | 251, 335 |
| MmeI | TCCRAC | 1 cut(s) | 52 |
| MnlI | CCTC | 8 cut(s) | 51, 181, 525, 677, 680, 923, 1036, 1078 |
| Mox20I | TGGCCA | 2 cut(s) | 251, 335 |
| MscI | TGGCCA | 2 cut(s) | 251, 335 |
| MseI | TTAA | 3 cut(s) | 558, 642, 762 |
| MslI | CAYNNNNRTG | 4 cut(s) | 233, 257, 550, 776 |
| Msp20I | TGGCCA | 2 cut(s) | 251, 335 |
| MspCI | CTTAAG | 1 cut(s) | 641 |
| MspI | CCGG | 2 cut(s) | 329, 706 |
| MspR9I | CCNGG | 1 cut(s) | 707 |
| MvnI | CGCG | 1 cut(s) | 924 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 373, 520, 696 |
| NciI | CCSGG | 1 cut(s) | 707 |
| NdeI | CATATG | 1 cut(s) | 160 |
| NdeII | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| NlaIII | CATG | 6 cut(s) | 232, 256, 311, 460, 781, 788 |
| NmuCI | GTSAC | 2 cut(s) | 806, 883 |
| NruI | TCGCGA | 1 cut(s) | 924 |
| NspI | RCATGY | 2 cut(s) | 232, 788 |
| NspV | TTCGAA | 1 cut(s) | 801 |
| PagI | TCATGA | 1 cut(s) | 456 |
| PciI | ACATGT | 1 cut(s) | 784 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 25 |
| PfeI | GAWTC | 1 cut(s) | 574 |
| PfoI | TCCNGGA | 1 cut(s) | 705 |
| PkrI | GCNGC | 3 cut(s) | 277, 366, 586 |
| PscI | ACATGT | 1 cut(s) | 784 |
| PspFI | CCCAGC | 2 cut(s) | 692, 959 |
| PspPI | GGNCC | 1 cut(s) | 1073 |
| PstI | CTGCAG | 2 cut(s) | 280, 366 |
| PsuI | RGATCY | 1 cut(s) | 37 |
| RruI | TCGCGA | 1 cut(s) | 924 |
| RsaI | GTAC | 2 cut(s) | 140, 609 |
| RsaNI | GTAC | 2 cut(s) | 139, 608 |
| RseI | CAYNNNNRTG | 4 cut(s) | 233, 257, 550, 776 |
| SaqAI | TTAA | 3 cut(s) | 558, 642, 762 |
| SatI | GCNGC | 3 cut(s) | 276, 365, 585 |
| Sau3AI | GATC | 5 cut(s) | 37, 90, 891, 999, 1020 |
| Sau96I | GGNCC | 1 cut(s) | 1073 |
| ScrFI | CCNGG | 1 cut(s) | 707 |
| SfaNI | GCATC | 2 cut(s) | 225, 249 |
| SfcI | CTRYAG | 5 cut(s) | 276, 362, 537, 670, 815 |
| SfuI | TTCGAA | 1 cut(s) | 801 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 233, 257, 550, 776 |
| SmlI | CTYRAG | 3 cut(s) | 641, 749, 831 |
| SmoI | CTYRAG | 3 cut(s) | 641, 749, 831 |
| Sse9I | AATT | 1 cut(s) | 826 |
| SsiI | CCGC | 3 cut(s) | 597, 626, 986 |
| SspI | AATATT | 1 cut(s) | 148 |
| SspMI | CTAG | 2 cut(s) | 122, 581 |
| StyD4I | CCNGG | 1 cut(s) | 705 |
| StyI | CCWWGG | 1 cut(s) | 336 |
| TaaI | ACNGT | 3 cut(s) | 77, 819, 845 |
| TaiI | ACGT | 1 cut(s) | 885 |
| TaqI | TCGA | 2 cut(s) | 801, 1046 |
| TasI | AATT | 1 cut(s) | 826 |
| TatI | WGTACW | 1 cut(s) | 138 |
| TfiI | GAWTC | 1 cut(s) | 574 |
| Tru1I | TTAA | 3 cut(s) | 558, 642, 762 |
| Tru9I | TTAA | 3 cut(s) | 558, 642, 762 |
| TseFI | GTSAC | 2 cut(s) | 806, 883 |
| TseI | GCWGC | 3 cut(s) | 275, 364, 584 |
| Tsp45I | GTSAC | 2 cut(s) | 806, 883 |
| TspDTI | ATGAA | 6 cut(s) | 49, 177, 324, 445, 566, 852 |
| Vha464I | CTTAAG | 1 cut(s) | 641 |
| XceI | RCATGY | 2 cut(s) | 232, 788 |
| XmiI | GTMKAC | 1 cut(s) | 155 |
| XspI | CTAG | 2 cut(s) | 122, 581 |