Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 19 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 127, 244 |
| AgsI | TTSAA | 1 cut(s) | 71 |
| AhlI | ACTAGT | 1 cut(s) | 104 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| ApeKI | GCWGC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 1 cut(s) | 100 |
| AvaII | GGWCC | 1 cut(s) | 118 |
| BbvI | GCAGC | 1 cut(s) | 122 |
| BccI | CCATC | 2 cut(s) | 184, 203 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 159, 193 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BcuI | ACTAGT | 1 cut(s) | 104 |
| BfaI | CTAG | 4 cut(s) | 105, 243, 272, 295 |
| BfmI | CTRYAG | 1 cut(s) | 199 |
| BisI | GCNGC | 1 cut(s) | 136 |
| BlsI | GCNGC | 1 cut(s) | 137 |
| Bme18I | GGWCC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 1 cut(s) | 118 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 107, 139 |
| BsaI | GGTCTC | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 127, 244 |
| Bse3DI | GCAATG | 1 cut(s) | 21 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 127, 244 |
| BseMI | GCAATG | 1 cut(s) | 21 |
| BseMII | CTCAG | 1 cut(s) | 105 |
| BseXI | GCAGC | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 127, 244 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| Bso31I | GGTCTC | 1 cut(s) | 32 |
| Bsp19I | CCATGG | 1 cut(s) | 84 |
| BspACI | CCGC | 1 cut(s) | 19 |
| BspCNI | CTCAG | 1 cut(s) | 106 |
| BspTNI | GGTCTC | 1 cut(s) | 32 |
| BsrDI | GCAATG | 1 cut(s) | 21 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| BssT1I | CCWWGG | 1 cut(s) | 84 |
| Bst4CI | ACNGT | 1 cut(s) | 80 |
| BstC8I | GCNNGC | 2 cut(s) | 21, 168 |
| BstDEI | CTNAG | 2 cut(s) | 114, 256 |
| BstDSI | CCRYGG | 1 cut(s) | 84 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 125 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BstSFI | CTRYAG | 1 cut(s) | 199 |
| BstV1I | GCAGC | 1 cut(s) | 122 |
| BtgI | CCRYGG | 1 cut(s) | 84 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| Cac8I | GCNNGC | 2 cut(s) | 21, 168 |
| Cfr13I | GGNCC | 1 cut(s) | 118 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 2 cut(s) | 85, 284 |
| CviJI | RGCY | 4 cut(s) | 23, 135, 271, 281 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 135, 271, 281 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 2 cut(s) | 114, 256 |
| Eco130I | CCWWGG | 1 cut(s) | 84 |
| Eco31I | GGTCTC | 1 cut(s) | 32 |
| Eco47I | GGWCC | 1 cut(s) | 118 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 125 |
| EcoO109I | RGGNCCY | 1 cut(s) | 118 |
| EcoT14I | CCWWGG | 1 cut(s) | 84 |
| ErhI | CCWWGG | 1 cut(s) | 84 |
| FaeI | CATG | 2 cut(s) | 88, 287 |
| FaiI | YATR | 7 cut(s) | 53, 86, 162, 164, 201, 225, 285 |
| FatI | CATG | 2 cut(s) | 84, 283 |
| FauI | CCCGC | 1 cut(s) | 12 |
| Fnu4HI | GCNGC | 1 cut(s) | 136 |
| Fsp4HI | GCNGC | 1 cut(s) | 136 |
| FspBI | CTAG | 4 cut(s) | 105, 243, 272, 295 |
| GluI | GCNGC | 1 cut(s) | 136 |
| Hin1II | CATG | 2 cut(s) | 88, 287 |
| HincII | GTYRAC | 1 cut(s) | 64 |
| HindII | GTYRAC | 1 cut(s) | 64 |
| HphI | GGTGA | 1 cut(s) | 100 |
| Hpy166II | GTNNAC | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy8I | GTNNAC | 1 cut(s) | 64 |
| HpyAV | CCTTC | 1 cut(s) | 41 |
| HpyCH4III | ACNGT | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 3 cut(s) | 138, 153, 170 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpyF3I | CTNAG | 2 cut(s) | 114, 256 |
| Hsp92II | CATG | 2 cut(s) | 88, 287 |
| LpnPI | CCDG | 1 cut(s) | 9 |
| Lsp1109I | GCAGC | 1 cut(s) | 122 |
| MaeI | CTAG | 4 cut(s) | 105, 243, 272, 295 |
| MluCI | AATT | 3 cut(s) | 171, 184, 250 |
| MnlI | CCTC | 5 cut(s) | 109, 121, 131, 139, 271 |
| MseI | TTAA | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NcoI | CCATGG | 1 cut(s) | 84 |
| NlaIII | CATG | 2 cut(s) | 88, 287 |
| PkrI | GCNGC | 1 cut(s) | 137 |
| PpuMI | RGGWCCY | 1 cut(s) | 118 |
| Psp5II | RGGWCCY | 1 cut(s) | 118 |
| PspPI | GGNCC | 1 cut(s) | 118 |
| PspPPI | RGGWCCY | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| SaqAI | TTAA | 1 cut(s) | 183 |
| SatI | GCNGC | 1 cut(s) | 136 |
| Sau96I | GGNCC | 1 cut(s) | 118 |
| SetI | ASST | 4 cut(s) | 52, 123, 132, 240 |
| SfcI | CTRYAG | 1 cut(s) | 199 |
| SinI | GGWCC | 1 cut(s) | 118 |
| SpeI | ACTAGT | 1 cut(s) | 104 |
| Sse9I | AATT | 3 cut(s) | 171, 184, 250 |
| SsiI | CCGC | 1 cut(s) | 19 |
| SspMI | CTAG | 4 cut(s) | 105, 243, 272, 295 |
| StyI | CCWWGG | 1 cut(s) | 84 |
| TaaI | ACNGT | 1 cut(s) | 80 |
| TasI | AATT | 3 cut(s) | 171, 184, 250 |
| TatI | WGTACW | 1 cut(s) | 189 |
| Tru1I | TTAA | 1 cut(s) | 183 |
| Tru9I | TTAA | 1 cut(s) | 183 |
| TseI | GCWGC | 1 cut(s) | 135 |
| TspDTI | ATGAA | 1 cut(s) | 32 |
| TspGWI | ACGGA | 1 cut(s) | 89 |
| VpaK11BI | GGWCC | 1 cut(s) | 118 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 125 |
| XspI | CTAG | 4 cut(s) | 105, 243, 272, 295 |