ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1044 |
| AccB1I | GGYRCC | 1 cut(s) | 1044 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 747 |
| AccI | GTMKAC | 2 cut(s) | 529, 1507 |
| AciI | CCGC | 4 cut(s) | 479, 944, 1232, 2045 |
| AclWI | GGATC | 5 cut(s) | 883, 974, 1079, 1477, 1657 |
| AcoI | YGGCCR | 3 cut(s) | 630, 738, 870 |
| AcsI | RAATTY | 2 cut(s) | 841, 1248 |
| AcuI | CTGAAG | 3 cut(s) | 237, 267, 1833 |
| AdeI | CACNNNGTG | 1 cut(s) | 2057 |
| AfaI | GTAC | 6 cut(s) | 106, 369, 521, 938, 1046, 1384 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 164, 478, 747, 879, 1136, 1400, 1895, 2089 |
| AflIII | ACRYGT | 2 cut(s) | 1791, 2008 |
| AgeI | ACCGGT | 1 cut(s) | 798 |
| AgsI | TTSAA | 4 cut(s) | 560, 698, 856, 1030 |
| AjnI | CCWGG | 1 cut(s) | 1314 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1132, 1164, 1444, 1476 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1756, 1788 |
| AluBI | AGCT | 9 cut(s) | 221, 546, 563, 863, 1635, 1661, 1874, 1994, 2172 |
| AluI | AGCT | 9 cut(s) | 221, 546, 563, 863, 1635, 1661, 1874, 1994, 2172 |
| Alw26I | GTCTC | 3 cut(s) | 366, 1459, 2309 |
| AlwI | GGATC | 5 cut(s) | 883, 974, 1079, 1477, 1657 |
| Ama87I | CYCGRG | 2 cut(s) | 162, 1645 |
| AoxI | GGCC | 6 cut(s) | 166, 630, 738, 870, 1803, 1865 |
| ApeKI | GCWGC | 6 cut(s) | 429, 975, 1496, 1699, 1884, 1994 |
| ApoI | RAATTY | 2 cut(s) | 841, 1248 |
| AsiGI | ACCGGT | 1 cut(s) | 798 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 564 |
| Asp718I | GGTACC | 1 cut(s) | 1044 |
| AspLEI | GCGC | 1 cut(s) | 2260 |
| AspS9I | GGNCC | 4 cut(s) | 166, 796, 1391, 1803 |
| AsuC2I | CCSGG | 7 cut(s) | 341, 1049, 1395, 1580, 1589, 1646, 1647 |
| AsuHPI | GGTGA | 6 cut(s) | 779, 1067, 1116, 1330, 2072, 2165 |
| AsuII | TTCGAA | 1 cut(s) | 838 |
| AvaI | CYCGRG | 2 cut(s) | 162, 1645 |
| AvaII | GGWCC | 2 cut(s) | 796, 1391 |
| BalI | TGGCCA | 2 cut(s) | 740, 872 |
| BanI | GGYRCC | 1 cut(s) | 1044 |
| BauI | CACGAG | 1 cut(s) | 2367 |
| BbsI | GAAGAC | 1 cut(s) | 1906 |
| BbvI | GCAGC | 6 cut(s) | 441, 987, 1508, 1711, 1871, 1981 |
| BccI | CCATC | 8 cut(s) | 166, 1052, 1126, 1913, 1931, 2144, 2338, 2345 |
| BceAI | ACGGC | 1 cut(s) | 245 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 940, 974 |
| BciT130I | CCWGG | 1 cut(s) | 1316 |
| BcnI | CCSGG | 7 cut(s) | 341, 1049, 1395, 1580, 1589, 1646, 1647 |
| BcoDI | GTCTC | 3 cut(s) | 366, 1459, 2309 |
| BfaI | CTAG | 9 cut(s) | 498, 897, 1341, 1658, 1869, 2022, 2061, 2280, 2440 |
| BfmI | CTRYAG | 2 cut(s) | 383, 2145 |
| BglII | AGATCT | 1 cut(s) | 642 |
| BisI | GCNGC | 7 cut(s) | 430, 480, 976, 1497, 1700, 1885, 1995 |
| BlsI | GCNGC | 7 cut(s) | 431, 481, 977, 1498, 1701, 1886, 1996 |
| BmcAI | AGTACT | 2 cut(s) | 106, 938 |
| Bme1390I | CCNGG | 8 cut(s) | 341, 1049, 1316, 1395, 1580, 1589, 1646, 1647 |
| Bme18I | GGWCC | 2 cut(s) | 796, 1391 |
| BmeT110I | CYCGRG | 2 cut(s) | 162, 1645 |
| BmgT120I | GGNCC | 4 cut(s) | 166, 796, 1391, 1803 |
| BmiI | GGNNCC | 5 cut(s) | 167, 291, 797, 1046, 1094 |
| BmrFI | CCNGG | 8 cut(s) | 341, 1049, 1316, 1395, 1580, 1589, 1646, 1647 |
| BmrI | ACTGGG | 1 cut(s) | 1887 |
| BmsI | GCATC | 4 cut(s) | 441, 718, 1379, 2022 |
| BmuI | ACTGGG | 1 cut(s) | 1887 |
| BpiI | GAAGAC | 1 cut(s) | 1906 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2156, 2188 |
| BpmI | CTGGAG | 1 cut(s) | 59 |
| Bpu14I | TTCGAA | 1 cut(s) | 838 |
| BpuEI | CTTGAG | 2 cut(s) | 112, 1522 |
| BpuMI | CCSGG | 7 cut(s) | 341, 1049, 1395, 1580, 1589, 1646, 1647 |
| BsaAI | YACGTR | 1 cut(s) | 2057 |
| BsaJI | CCNNGG | 5 cut(s) | 523, 909, 1088, 1645, 2083 |
| BsaWI | WCCGGW | 1 cut(s) | 798 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 261, 291, 1144, 1174, 1756, 1786, 1933, 1963 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 164, 478, 747, 879, 1136, 1400, 1895, 2089 |
| Bse118I | RCCGGY | 3 cut(s) | 632, 798, 1198 |
| Bse1I | ACTGG | 3 cut(s) | 472, 1567, 1893 |
| Bse3DI | GCAATG | 1 cut(s) | 2070 |
| BseBI | CCWGG | 1 cut(s) | 1316 |
| BseDI | CCNNGG | 5 cut(s) | 523, 909, 1088, 1645, 2083 |
| BseGI | GGATG | 3 cut(s) | 2098, 2341, 2356 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 164, 478, 747, 879, 1136, 1400, 1895, 2089 |
| BseMI | GCAATG | 1 cut(s) | 2070 |
| BseMII | CTCAG | 1 cut(s) | 497 |
| BseNI | ACTGG | 3 cut(s) | 472, 1567, 1893 |
| BseRI | GAGGAG | 2 cut(s) | 1279, 1782 |
| BseXI | GCAGC | 6 cut(s) | 441, 987, 1508, 1711, 1871, 1981 |
| BshFI | GGCC | 6 cut(s) | 168, 632, 740, 872, 1805, 1867 |
| BshNI | GGYRCC | 1 cut(s) | 1044 |
| BshTI | ACCGGT | 1 cut(s) | 798 |
| BsiHKCI | CYCGRG | 2 cut(s) | 162, 1645 |
| BsiSI | CCGG | 9 cut(s) | 340, 633, 799, 1048, 1199, 1394, 1579, 1589, 1646 |
| BslFI | GGGAC | 2 cut(s) | 809, 2371 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 164, 478, 747, 879, 1136, 1400, 1895, 2089 |
| BsmAI | GTCTC | 3 cut(s) | 366, 1459, 2309 |
| BsmFI | GGGAC | 2 cut(s) | 809, 2371 |
| BsnI | GGCC | 6 cut(s) | 168, 632, 740, 872, 1805, 1867 |
| BsoBI | CYCGRG | 2 cut(s) | 162, 1645 |
| Bsp119I | TTCGAA | 1 cut(s) | 838 |
| BspACI | CCGC | 4 cut(s) | 479, 944, 1232, 2045 |
| BspANI | GGCC | 6 cut(s) | 168, 632, 740, 872, 1805, 1867 |
| BspCNI | CTCAG | 1 cut(s) | 496 |
| BspHI | TCATGA | 1 cut(s) | 67 |
| BspLI | GGNNCC | 5 cut(s) | 167, 291, 797, 1046, 1094 |
| BspMAI | CTGCAG | 1 cut(s) | 387 |
| BspPI | GGATC | 5 cut(s) | 883, 974, 1079, 1477, 1657 |
| BspT104I | TTCGAA | 1 cut(s) | 838 |
| BspT107I | GGYRCC | 1 cut(s) | 1044 |
| BsrDI | GCAATG | 1 cut(s) | 2070 |
| BsrFI | RCCGGY | 3 cut(s) | 632, 798, 1198 |
| BsrI | ACTGG | 3 cut(s) | 472, 1567, 1893 |
| BssAI | RCCGGY | 3 cut(s) | 632, 798, 1198 |
| BssECI | CCNNGG | 5 cut(s) | 523, 909, 1088, 1645, 2083 |
| BssSI | CACGAG | 1 cut(s) | 2367 |
| BssT1I | CCWWGG | 2 cut(s) | 523, 909 |
| Bst2BI | CACGAG | 1 cut(s) | 2367 |
| Bst2UI | CCWGG | 1 cut(s) | 1316 |
| Bst4CI | ACNGT | 5 cut(s) | 109, 1360, 1387, 1515, 1735 |
| Bst6I | CTCTTC | 3 cut(s) | 587, 1009, 1856 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 453, 2057, 2276 |
| BstBAI | YACGTR | 1 cut(s) | 2057 |
| BstBI | TTCGAA | 1 cut(s) | 838 |
| BstC8I | GCNNGC | 3 cut(s) | 634, 963, 1428 |
| BstDEI | CTNAG | 3 cut(s) | 483, 1221, 1875 |
| BstDSI | CCRYGG | 1 cut(s) | 1088 |
| BstEII | GGTNACC | 1 cut(s) | 502 |
| BstF5I | GGATG | 3 cut(s) | 2098, 2341, 2356 |
| BstHHI | GCGC | 1 cut(s) | 2260 |
| BstMAI | GTCTC | 3 cut(s) | 366, 1459, 2309 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 453, 869, 883, 2027, 2057, 2276 |
| BstNI | CCWGG | 1 cut(s) | 1316 |
| BstNSI | RCATGY | 2 cut(s) | 1795, 2012 |
| BstPI | GGTNACC | 1 cut(s) | 502 |
| BstSCI | CCNGG | 8 cut(s) | 339, 1047, 1314, 1393, 1578, 1587, 1644, 1645 |
| BstSFI | CTRYAG | 2 cut(s) | 383, 2145 |
| BstV1I | GCAGC | 6 cut(s) | 441, 987, 1508, 1711, 1871, 1981 |
| BstV2I | GAAGAC | 1 cut(s) | 1906 |
| BstX2I | RGATCY | 2 cut(s) | 642, 888 |
| BstYI | RGATCY | 2 cut(s) | 642, 888 |
| BsuRI | GGCC | 6 cut(s) | 168, 632, 740, 872, 1805, 1867 |
| BtgI | CCRYGG | 1 cut(s) | 1088 |
| BtgZI | GCGATG | 2 cut(s) | 98, 2045 |
| BtsCI | GGATG | 3 cut(s) | 2098, 2341, 2356 |
| BtsI | GCAGTG | 1 cut(s) | 663 |
| BtsIMutI | CAGTG | 5 cut(s) | 663, 1740, 1803, 1857, 1900 |
| Cac8I | GCNNGC | 3 cut(s) | 634, 963, 1428 |
| CciI | TCATGA | 1 cut(s) | 67 |
| CfoI | GCGC | 1 cut(s) | 2260 |
| Cfr10I | RCCGGY | 3 cut(s) | 632, 798, 1198 |
| Cfr13I | GGNCC | 4 cut(s) | 166, 796, 1391, 1803 |
| Cfr9I | CCCGGG | 1 cut(s) | 1645 |
| CseI | GACGC | 1 cut(s) | 470 |
| CsiI | ACCWGGT | 1 cut(s) | 1314 |
| Csp6I | GTAC | 6 cut(s) | 105, 368, 520, 937, 1045, 1383 |
| CspAI | ACCGGT | 1 cut(s) | 798 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2235, 2270 |
| CviQI | GTAC | 6 cut(s) | 105, 368, 520, 937, 1045, 1383 |
| DdeI | CTNAG | 3 cut(s) | 483, 1221, 1875 |
| DraI | TTTAAA | 1 cut(s) | 1114 |
| DraIII | CACNNNGTG | 1 cut(s) | 2057 |
| EaeI | YGGCCR | 3 cut(s) | 630, 738, 870 |
| Eam1104I | CTCTTC | 3 cut(s) | 587, 1009, 1856 |
| EarI | CTCTTC | 3 cut(s) | 587, 1009, 1856 |
| EciI | GGCGGA | 1 cut(s) | 2060 |
| Eco130I | CCWWGG | 2 cut(s) | 523, 909 |
| Eco147I | AGGCCT | 1 cut(s) | 1867 |
| Eco47I | GGWCC | 2 cut(s) | 796, 1391 |
| Eco57I | CTGAAG | 3 cut(s) | 237, 267, 1833 |
| Eco88I | CYCGRG | 2 cut(s) | 162, 1645 |
| Eco91I | GGTNACC | 1 cut(s) | 502 |
| EcoO109I | RGGNCCY | 1 cut(s) | 166 |
| EcoO65I | GGTNACC | 1 cut(s) | 502 |
| EcoRI | GAATTC | 1 cut(s) | 1248 |
| EcoRII | CCWGG | 1 cut(s) | 1314 |
| EcoT14I | CCWWGG | 2 cut(s) | 523, 909 |
| ErhI | CCWWGG | 2 cut(s) | 523, 909 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1624, 1656 |
| FaqI | GGGAC | 2 cut(s) | 809, 2371 |
| FauI | CCCGC | 1 cut(s) | 951 |
| FauNDI | CATATG | 2 cut(s) | 13, 1182 |
| FblI | GTMKAC | 2 cut(s) | 529, 1507 |
| Fnu4HI | GCNGC | 7 cut(s) | 430, 480, 976, 1497, 1700, 1885, 1995 |
| FokI | GGATG | 3 cut(s) | 2105, 2348, 2363 |
| Fsp4HI | GCNGC | 7 cut(s) | 430, 480, 976, 1497, 1700, 1885, 1995 |
| FspBI | CTAG | 9 cut(s) | 498, 897, 1341, 1658, 1869, 2022, 2061, 2280, 2440 |
| GlaI | GCGC | 1 cut(s) | 2259 |
| GluI | GCNGC | 7 cut(s) | 430, 480, 976, 1497, 1700, 1885, 1995 |
| GsuI | CTGGAG | 1 cut(s) | 59 |
| HaeIII | GGCC | 6 cut(s) | 168, 632, 740, 872, 1805, 1867 |
| HapII | CCGG | 9 cut(s) | 340, 633, 799, 1048, 1199, 1394, 1579, 1589, 1646 |
| HgaI | GACGC | 1 cut(s) | 470 |
| HhaI | GCGC | 1 cut(s) | 2260 |
| Hin6I | GCGC | 1 cut(s) | 2258 |
| HinP1I | GCGC | 1 cut(s) | 2258 |
| HincII | GTYRAC | 3 cut(s) | 407, 1508, 2311 |
| HindII | GTYRAC | 3 cut(s) | 407, 1508, 2311 |
| HindIII | AAGCTT | 1 cut(s) | 561 |
| HinfI | GANTC | 9 cut(s) | 182, 323, 778, 1269, 1344, 1504, 1902, 1953, 2317 |
| HpaII | CCGG | 9 cut(s) | 340, 633, 799, 1048, 1199, 1394, 1579, 1589, 1646 |
| HphI | GGTGA | 6 cut(s) | 779, 1067, 1116, 1330, 2072, 2165 |
| Hpy166II | GTNNAC | 9 cut(s) | 407, 415, 530, 1312, 1508, 1731, 1740, 1837, 2311 |
| Hpy188I | TCNGA | 6 cut(s) | 820, 1131, 1451, 1970, 2185, 2343 |
| Hpy8I | GTNNAC | 9 cut(s) | 407, 415, 530, 1312, 1508, 1731, 1740, 1837, 2311 |
| Hpy99I | CGWCG | 1 cut(s) | 1512 |
| HpyAV | CCTTC | 8 cut(s) | 48, 179, 993, 1703, 1794, 1825, 1857, 2125 |
| HpyCH4III | ACNGT | 5 cut(s) | 109, 1360, 1387, 1515, 1735 |
| HpyCH4IV | ACGT | 2 cut(s) | 1747, 2056 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 453, 869, 883, 2027, 2057, 2276 |
| HpyF3I | CTNAG | 3 cut(s) | 483, 1221, 1875 |
| HpySE526I | ACGT | 2 cut(s) | 1747, 2056 |
| HspAI | GCGC | 1 cut(s) | 2258 |
| KpnI | GGTACC | 1 cut(s) | 1048 |
| KroI | GCCGGC | 1 cut(s) | 632 |
| KroNI | GCCGGC | 1 cut(s) | 634 |
| LmnI | GCTCC | 3 cut(s) | 295, 1098, 1922 |
| Lsp1109I | GCAGC | 6 cut(s) | 441, 987, 1508, 1711, 1871, 1981 |
| LweI | GCATC | 4 cut(s) | 441, 718, 1379, 2022 |
| MabI | ACCWGGT | 1 cut(s) | 1314 |
| MaeI | CTAG | 9 cut(s) | 498, 897, 1341, 1658, 1869, 2022, 2061, 2280, 2440 |
| MaeII | ACGT | 2 cut(s) | 1747, 2056 |
| MaeIII | GTNAC | 7 cut(s) | 302, 493, 502, 913, 1547, 1748, 2228 |
| MflI | RGATCY | 2 cut(s) | 642, 888 |
| MlsI | TGGCCA | 2 cut(s) | 740, 872 |
| MluCI | AATT | 8 cut(s) | 467, 648, 841, 1068, 1248, 1280, 1984, 2076 |
| MluNI | TGGCCA | 2 cut(s) | 740, 872 |
| MlyI | GAGTC | 5 cut(s) | 317, 1278, 1513, 1896, 2311 |
| MmeI | TCCRAC | 3 cut(s) | 798, 1391, 1686 |
| Mox20I | TGGCCA | 2 cut(s) | 740, 872 |
| MroNI | GCCGGC | 1 cut(s) | 632 |
| MroXI | GAANNNNTTC | 1 cut(s) | 564 |
| MscI | TGGCCA | 2 cut(s) | 740, 872 |
| MseI | TTAA | 5 cut(s) | 647, 651, 845, 1113, 2433 |
| MslI | CAYNNNNRTG | 2 cut(s) | 722, 1796 |
| Msp20I | TGGCCA | 2 cut(s) | 740, 872 |
| MspI | CCGG | 9 cut(s) | 340, 633, 799, 1048, 1199, 1394, 1579, 1589, 1646 |
| MspR9I | CCNGG | 8 cut(s) | 341, 1049, 1316, 1395, 1580, 1589, 1646, 1647 |
| MvaI | CCWGG | 1 cut(s) | 1316 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 453, 869, 883, 2027, 2057, 2276 |
| NaeI | GCCGGC | 1 cut(s) | 634 |
| NciI | CCSGG | 7 cut(s) | 341, 1049, 1395, 1580, 1589, 1646, 1647 |
| NdeI | CATATG | 2 cut(s) | 13, 1182 |
| NgoMIV | GCCGGC | 1 cut(s) | 632 |
| NlaIV | GGNNCC | 5 cut(s) | 167, 291, 797, 1046, 1094 |
| NmuCI | GTSAC | 2 cut(s) | 302, 2228 |
| NspI | RCATGY | 2 cut(s) | 1795, 2012 |
| NspV | TTCGAA | 1 cut(s) | 838 |
| PacI | TTAATTAA | 1 cut(s) | 651 |
| PagI | TCATGA | 1 cut(s) | 67 |
| PceI | AGGCCT | 1 cut(s) | 1867 |
| PciI | ACATGT | 2 cut(s) | 1791, 2008 |
| PdiI | GCCGGC | 1 cut(s) | 634 |
| PdmI | GAANNNNTTC | 1 cut(s) | 564 |
| PfeI | GAWTC | 4 cut(s) | 182, 778, 1344, 1953 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 747 |
| PfoI | TCCNGGA | 2 cut(s) | 1393, 1578 |
| PinAI | ACCGGT | 1 cut(s) | 798 |
| PkrI | GCNGC | 7 cut(s) | 431, 481, 977, 1498, 1701, 1886, 1996 |
| PleI | GAGTC | 5 cut(s) | 317, 1277, 1512, 1896, 2311 |
| PpsI | GAGTC | 5 cut(s) | 317, 1277, 1512, 1896, 2311 |
| Ppu21I | YACGTR | 1 cut(s) | 2057 |
| PscI | ACATGT | 2 cut(s) | 1791, 2008 |
| Psp6I | CCWGG | 1 cut(s) | 1314 |
| PspEI | GGTNACC | 1 cut(s) | 502 |
| PspGI | CCWGG | 1 cut(s) | 1314 |
| PspN4I | GGNNCC | 5 cut(s) | 167, 291, 797, 1046, 1094 |
| PspPI | GGNCC | 4 cut(s) | 166, 796, 1391, 1803 |
| PstI | CTGCAG | 1 cut(s) | 387 |
| PsuI | RGATCY | 2 cut(s) | 642, 888 |
| RsaI | GTAC | 6 cut(s) | 106, 369, 521, 938, 1046, 1384 |
| RsaNI | GTAC | 6 cut(s) | 105, 368, 520, 937, 1045, 1383 |
| RseI | CAYNNNNRTG | 2 cut(s) | 722, 1796 |
| SalI | GTCGAC | 1 cut(s) | 1506 |
| SaqAI | TTAA | 5 cut(s) | 647, 651, 845, 1113, 2433 |
| SatI | GCNGC | 7 cut(s) | 430, 480, 976, 1497, 1700, 1885, 1995 |
| Sau96I | GGNCC | 4 cut(s) | 166, 796, 1391, 1803 |
| ScaI | AGTACT | 2 cut(s) | 106, 938 |
| SchI | GAGTC | 5 cut(s) | 317, 1278, 1513, 1896, 2311 |
| ScrFI | CCNGG | 8 cut(s) | 341, 1049, 1316, 1395, 1580, 1589, 1646, 1647 |
| SexAI | ACCWGGT | 1 cut(s) | 1314 |
| SfaNI | GCATC | 4 cut(s) | 441, 718, 1379, 2022 |
| SfcI | CTRYAG | 2 cut(s) | 383, 2145 |
| SfuI | TTCGAA | 1 cut(s) | 838 |
| SinI | GGWCC | 2 cut(s) | 796, 1391 |
| SmaI | CCCGGG | 1 cut(s) | 1647 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 722, 1796 |
| SmlI | CTYRAG | 2 cut(s) | 91, 1501 |
| SmoI | CTYRAG | 2 cut(s) | 91, 1501 |
| Sse9I | AATT | 8 cut(s) | 467, 648, 841, 1068, 1248, 1280, 1984, 2076 |
| SseBI | AGGCCT | 1 cut(s) | 1867 |
| SsiI | CCGC | 4 cut(s) | 479, 944, 1232, 2045 |
| SspMI | CTAG | 9 cut(s) | 498, 897, 1341, 1658, 1869, 2022, 2061, 2280, 2440 |
| StuI | AGGCCT | 1 cut(s) | 1867 |
| StyD4I | CCNGG | 8 cut(s) | 339, 1047, 1314, 1393, 1578, 1587, 1644, 1645 |
| StyI | CCWWGG | 2 cut(s) | 523, 909 |
| TaaI | ACNGT | 5 cut(s) | 109, 1360, 1387, 1515, 1735 |
| TaiI | ACGT | 2 cut(s) | 1750, 2059 |
| TaqI | TCGA | 8 cut(s) | 19, 588, 838, 859, 950, 1507, 2106, 2288 |
| TasI | AATT | 8 cut(s) | 467, 648, 841, 1068, 1248, 1280, 1984, 2076 |
| TatI | WGTACW | 2 cut(s) | 104, 936 |
| TauI | GCSGC | 1 cut(s) | 482 |
| TfiI | GAWTC | 4 cut(s) | 182, 778, 1344, 1953 |
| Tru1I | TTAA | 5 cut(s) | 647, 651, 845, 1113, 2433 |
| Tru9I | TTAA | 5 cut(s) | 647, 651, 845, 1113, 2433 |
| TscAI | CASTG | 5 cut(s) | 663, 1740, 1803, 1857, 1900 |
| TseFI | GTSAC | 2 cut(s) | 302, 2228 |
| TseI | GCWGC | 6 cut(s) | 429, 975, 1496, 1699, 1884, 1994 |
| Tsp45I | GTSAC | 2 cut(s) | 302, 2228 |
| TspGWI | ACGGA | 1 cut(s) | 1077 |
| TspMI | CCCGGG | 1 cut(s) | 1645 |
| TspRI | CASTG | 5 cut(s) | 663, 1740, 1803, 1857, 1900 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 747 |
| VpaK11BI | GGWCC | 2 cut(s) | 796, 1391 |
| XapI | RAATTY | 2 cut(s) | 841, 1248 |
| XbaI | TCTAGA | 1 cut(s) | 896 |
| XceI | RCATGY | 2 cut(s) | 1795, 2012 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1813 |
| XmaI | CCCGGG | 1 cut(s) | 1645 |
| XmiI | GTMKAC | 2 cut(s) | 529, 1507 |
| XmnI | GAANNNNTTC | 1 cut(s) | 564 |
| XspI | CTAG | 9 cut(s) | 498, 897, 1341, 1658, 1869, 2022, 2061, 2280, 2440 |
| ZrmI | AGTACT | 2 cut(s) | 106, 938 |