Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 140 |
| AccIII | TCCGGA | 1 cut(s) | 278 |
| AciI | CCGC | 2 cut(s) | 7, 170 |
| AclWI | GGATC | 1 cut(s) | 695 |
| AcuI | CTGAAG | 2 cut(s) | 132, 183 |
| AfaI | GTAC | 3 cut(s) | 252, 371, 559 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 59 |
| AgsI | TTSAA | 2 cut(s) | 655, 694 |
| AjnI | CCWGG | 1 cut(s) | 160 |
| AluBI | AGCT | 3 cut(s) | 110, 197, 499 |
| AluI | AGCT | 3 cut(s) | 110, 197, 499 |
| AlwI | GGATC | 1 cut(s) | 695 |
| Aor13HI | TCCGGA | 1 cut(s) | 278 |
| AoxI | GGCC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 1 cut(s) | 529 |
| AspS9I | GGNCC | 1 cut(s) | 77 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 234, 267 |
| BbvI | GCAGC | 1 cut(s) | 541 |
| BciT130I | CCWGG | 1 cut(s) | 162 |
| BfaI | CTAG | 2 cut(s) | 54, 104 |
| BfuAI | ACCTGC | 1 cut(s) | 140 |
| BisI | GCNGC | 1 cut(s) | 530 |
| BlsI | GCNGC | 1 cut(s) | 531 |
| Bme1390I | CCNGG | 1 cut(s) | 162 |
| BmgT120I | GGNCC | 1 cut(s) | 77 |
| BmrFI | CCNGG | 1 cut(s) | 162 |
| BpmI | CTGGAG | 1 cut(s) | 545 |
| BpuEI | CTTGAG | 1 cut(s) | 447 |
| BsaAI | YACGTR | 1 cut(s) | 340 |
| BsaJI | CCNNGG | 2 cut(s) | 35, 161 |
| BsaWI | WCCGGW | 1 cut(s) | 278 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 371, 401, 518, 545, 548, 575 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 59 |
| Bse1I | ACTGG | 1 cut(s) | 587 |
| Bse3DI | GCAATG | 2 cut(s) | 155, 489 |
| BseAI | TCCGGA | 1 cut(s) | 278 |
| BseBI | CCWGG | 1 cut(s) | 162 |
| BseDI | CCNNGG | 2 cut(s) | 35, 161 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 59 |
| BseMI | GCAATG | 2 cut(s) | 155, 489 |
| BseNI | ACTGG | 1 cut(s) | 587 |
| BseXI | GCAGC | 1 cut(s) | 541 |
| BsgI | GTGCAG | 1 cut(s) | 450 |
| BshFI | GGCC | 1 cut(s) | 78 |
| BsiSI | CCGG | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 59 |
| BsmI | GAATGC | 1 cut(s) | 601 |
| BsnI | GGCC | 1 cut(s) | 78 |
| Bsp13I | TCCGGA | 1 cut(s) | 278 |
| Bsp143I | GATC | 3 cut(s) | 273, 520, 687 |
| BspACI | CCGC | 2 cut(s) | 7, 170 |
| BspANI | GGCC | 1 cut(s) | 78 |
| BspEI | TCCGGA | 1 cut(s) | 278 |
| BspMI | ACCTGC | 1 cut(s) | 140 |
| BspPI | GGATC | 1 cut(s) | 695 |
| BsrDI | GCAATG | 2 cut(s) | 155, 489 |
| BsrI | ACTGG | 1 cut(s) | 587 |
| BssECI | CCNNGG | 2 cut(s) | 35, 161 |
| BssMI | GATC | 3 cut(s) | 273, 520, 687 |
| Bst2UI | CCWGG | 1 cut(s) | 162 |
| BstBAI | YACGTR | 1 cut(s) | 340 |
| BstC8I | GCNNGC | 1 cut(s) | 669 |
| BstDEI | CTNAG | 3 cut(s) | 178, 323, 504 |
| BstDSI | CCRYGG | 1 cut(s) | 35 |
| BstKTI | GATC | 3 cut(s) | 276, 523, 690 |
| BstMBI | GATC | 3 cut(s) | 273, 520, 687 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 668 |
| BstNI | CCWGG | 1 cut(s) | 162 |
| BstSCI | CCNGG | 1 cut(s) | 160 |
| BstSNI | TACGTA | 1 cut(s) | 340 |
| BstV1I | GCAGC | 1 cut(s) | 541 |
| BstX2I | RGATCY | 1 cut(s) | 687 |
| BstYI | RGATCY | 1 cut(s) | 687 |
| BsuRI | GGCC | 1 cut(s) | 78 |
| BtgI | CCRYGG | 1 cut(s) | 35 |
| BtgZI | GCGATG | 1 cut(s) | 690 |
| BtsI | GCAGTG | 1 cut(s) | 539 |
| BtsIMutI | CAGTG | 3 cut(s) | 237, 539, 580 |
| BveI | ACCTGC | 1 cut(s) | 140 |
| Cac8I | GCNNGC | 1 cut(s) | 669 |
| Cfr13I | GGNCC | 1 cut(s) | 77 |
| Csp6I | GTAC | 3 cut(s) | 251, 370, 558 |
| CviAII | CATG | 3 cut(s) | 405, 410, 664 |
| CviQI | GTAC | 3 cut(s) | 251, 370, 558 |
| DdeI | CTNAG | 3 cut(s) | 178, 323, 504 |
| DpnI | GATC | 3 cut(s) | 275, 522, 689 |
| DpnII | GATC | 3 cut(s) | 273, 520, 687 |
| Eco105I | TACGTA | 1 cut(s) | 340 |
| Eco57I | CTGAAG | 2 cut(s) | 132, 183 |
| EcoRII | CCWGG | 1 cut(s) | 160 |
| FaeI | CATG | 3 cut(s) | 408, 413, 667 |
| FaiI | YATR | 8 cut(s) | 45, 189, 312, 406, 411, 446, 480, 665 |
| FatI | CATG | 3 cut(s) | 404, 409, 663 |
| Fnu4HI | GCNGC | 1 cut(s) | 530 |
| Fsp4HI | GCNGC | 1 cut(s) | 530 |
| FspBI | CTAG | 2 cut(s) | 54, 104 |
| GluI | GCNGC | 1 cut(s) | 530 |
| GsuI | CTGGAG | 1 cut(s) | 545 |
| HaeIII | GGCC | 1 cut(s) | 78 |
| HapII | CCGG | 1 cut(s) | 279 |
| Hin1II | CATG | 3 cut(s) | 408, 413, 667 |
| HinfI | GANTC | 1 cut(s) | 305 |
| HpaII | CCGG | 1 cut(s) | 279 |
| Hpy166II | GTNNAC | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 2 cut(s) | 612, 638 |
| Hpy188III | TCNNGA | 3 cut(s) | 279, 524, 691 |
| Hpy8I | GTNNAC | 1 cut(s) | 35 |
| HpyAV | CCTTC | 2 cut(s) | 107, 711 |
| HpyCH4IV | ACGT | 3 cut(s) | 249, 339, 560 |
| HpyCH4V | TGCA | 5 cut(s) | 265, 314, 431, 482, 667 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 668 |
| HpyF3I | CTNAG | 3 cut(s) | 178, 323, 504 |
| HpySE526I | ACGT | 3 cut(s) | 249, 339, 560 |
| Hsp92II | CATG | 3 cut(s) | 408, 413, 667 |
| Kpn2I | TCCGGA | 1 cut(s) | 278 |
| Kzo9I | GATC | 3 cut(s) | 273, 520, 687 |
| LmnI | GCTCC | 2 cut(s) | 107, 526 |
| LpnPI | CCDG | 8 cut(s) | 135, 147, 174, 186, 292, 417, 509, 568 |
| Lsp1109I | GCAGC | 1 cut(s) | 541 |
| MaeI | CTAG | 2 cut(s) | 54, 104 |
| MaeII | ACGT | 3 cut(s) | 249, 339, 560 |
| MaeIII | GTNAC | 1 cut(s) | 46 |
| MalI | GATC | 3 cut(s) | 275, 522, 689 |
| MboI | GATC | 3 cut(s) | 273, 520, 687 |
| MboII | GAAGA | 3 cut(s) | 39, 598, 629 |
| MflI | RGATCY | 1 cut(s) | 687 |
| MluCI | AATT | 6 cut(s) | 214, 395, 416, 475, 589, 649 |
| MmeI | TCCRAC | 1 cut(s) | 662 |
| MnlI | CCTC | 4 cut(s) | 90, 175, 289, 678 |
| MroI | TCCGGA | 1 cut(s) | 278 |
| MseI | TTAA | 4 cut(s) | 65, 213, 375, 398 |
| MslI | CAYNNNNRTG | 1 cut(s) | 260 |
| MspI | CCGG | 1 cut(s) | 279 |
| MspR9I | CCNGG | 1 cut(s) | 162 |
| Mva1269I | GAATGC | 1 cut(s) | 601 |
| MvaI | CCWGG | 1 cut(s) | 162 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 668 |
| NdeII | GATC | 3 cut(s) | 273, 520, 687 |
| NlaIII | CATG | 3 cut(s) | 408, 413, 667 |
| PctI | GAATGC | 1 cut(s) | 601 |
| PfeI | GAWTC | 1 cut(s) | 305 |
| PkrI | GCNGC | 1 cut(s) | 531 |
| Ppu21I | YACGTR | 1 cut(s) | 340 |
| Psp6I | CCWGG | 1 cut(s) | 160 |
| PspGI | CCWGG | 1 cut(s) | 160 |
| PspPI | GGNCC | 1 cut(s) | 77 |
| PsuI | RGATCY | 1 cut(s) | 687 |
| RsaI | GTAC | 3 cut(s) | 252, 371, 559 |
| RsaNI | GTAC | 3 cut(s) | 251, 370, 558 |
| RseI | CAYNNNNRTG | 1 cut(s) | 260 |
| SaqAI | TTAA | 4 cut(s) | 65, 213, 375, 398 |
| SatI | GCNGC | 1 cut(s) | 530 |
| Sau3AI | GATC | 3 cut(s) | 273, 520, 687 |
| Sau96I | GGNCC | 1 cut(s) | 77 |
| ScrFI | CCNGG | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 260 |
| SmlI | CTYRAG | 1 cut(s) | 462 |
| SmoI | CTYRAG | 1 cut(s) | 462 |
| SnaBI | TACGTA | 1 cut(s) | 340 |
| Sse9I | AATT | 6 cut(s) | 214, 395, 416, 475, 589, 649 |
| SsiI | CCGC | 2 cut(s) | 7, 170 |
| SspMI | CTAG | 2 cut(s) | 54, 104 |
| StyD4I | CCNGG | 1 cut(s) | 160 |
| TaiI | ACGT | 3 cut(s) | 252, 342, 563 |
| TaqI | TCGA | 1 cut(s) | 346 |
| TasI | AATT | 6 cut(s) | 214, 395, 416, 475, 589, 649 |
| TatI | WGTACW | 1 cut(s) | 369 |
| TfiI | GAWTC | 1 cut(s) | 305 |
| Tru1I | TTAA | 4 cut(s) | 65, 213, 375, 398 |
| Tru9I | TTAA | 4 cut(s) | 65, 213, 375, 398 |
| TscAI | CASTG | 3 cut(s) | 237, 539, 587 |
| TseI | GCWGC | 1 cut(s) | 529 |
| TspDTI | ATGAA | 2 cut(s) | 144, 693 |
| TspRI | CASTG | 3 cut(s) | 237, 539, 587 |
| XspI | CTAG | 2 cut(s) | 54, 104 |