Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 66 |
| AccBSI | CCGCTC | 1 cut(s) | 394 |
| AciI | CCGC | 2 cut(s) | 394, 494 |
| AclWI | GGATC | 1 cut(s) | 268 |
| AcsI | RAATTY | 2 cut(s) | 96, 436 |
| AcuI | CTGAAG | 1 cut(s) | 290 |
| AfaI | GTAC | 1 cut(s) | 214 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 66, 209, 283, 298, 364, 493 |
| AflIII | ACRYGT | 1 cut(s) | 157 |
| AgeI | ACCGGT | 1 cut(s) | 357 |
| AgsI | TTSAA | 1 cut(s) | 15 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| Alw21I | GWGCWC | 1 cut(s) | 291 |
| Alw26I | GTCTC | 2 cut(s) | 103, 424 |
| AlwI | GGATC | 1 cut(s) | 268 |
| Ama87I | CYCGRG | 1 cut(s) | 456 |
| AoxI | GGCC | 5 cut(s) | 57, 142, 262, 378, 387 |
| ApeKI | GCWGC | 1 cut(s) | 514 |
| ApoI | RAATTY | 2 cut(s) | 96, 436 |
| AsiGI | ACCGGT | 1 cut(s) | 357 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 10 |
| AspS9I | GGNCC | 5 cut(s) | 57, 142, 263, 378, 387 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 154, 476 |
| AvaI | CYCGRG | 1 cut(s) | 456 |
| Bbv12I | GWGCWC | 1 cut(s) | 291 |
| BbvI | GCAGC | 1 cut(s) | 501 |
| BccI | CCATC | 1 cut(s) | 389 |
| BceAI | ACGGC | 1 cut(s) | 502 |
| BcoDI | GTCTC | 2 cut(s) | 103, 424 |
| BfaI | CTAG | 3 cut(s) | 75, 282, 536 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 386 |
| BisI | GCNGC | 1 cut(s) | 515 |
| BlsI | GCNGC | 1 cut(s) | 516 |
| BmeT110I | CYCGRG | 1 cut(s) | 456 |
| BmgT120I | GGNCC | 5 cut(s) | 57, 142, 263, 378, 387 |
| BmiI | GGNNCC | 1 cut(s) | 265 |
| BpmI | CTGGAG | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 1 cut(s) | 297 |
| BsaWI | WCCGGW | 2 cut(s) | 202, 357 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 66, 209, 283, 298, 364, 493 |
| Bse118I | RCCGGY | 1 cut(s) | 357 |
| BseDI | CCNNGG | 1 cut(s) | 297 |
| BseGI | GGATG | 1 cut(s) | 307 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 66, 209, 283, 298, 364, 493 |
| BseRI | GAGGAG | 1 cut(s) | 482 |
| BseXI | GCAGC | 1 cut(s) | 501 |
| BseYI | CCCAGC | 2 cut(s) | 292, 541 |
| BshFI | GGCC | 5 cut(s) | 59, 144, 264, 380, 389 |
| BshTI | ACCGGT | 1 cut(s) | 357 |
| BsiHKAI | GWGCWC | 1 cut(s) | 291 |
| BsiHKCI | CYCGRG | 1 cut(s) | 456 |
| BsiSI | CCGG | 2 cut(s) | 203, 358 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 66, 209, 283, 298, 364, 493 |
| BsmAI | GTCTC | 2 cut(s) | 103, 424 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| BsnI | GGCC | 5 cut(s) | 59, 144, 264, 380, 389 |
| BsoBI | CYCGRG | 1 cut(s) | 456 |
| Bsp1286I | GDGCHC | 1 cut(s) | 291 |
| Bsp143I | GATC | 2 cut(s) | 172, 273 |
| BspACI | CCGC | 2 cut(s) | 394, 494 |
| BspANI | GGCC | 5 cut(s) | 59, 144, 264, 380, 389 |
| BspLI | GGNNCC | 1 cut(s) | 265 |
| BspPI | GGATC | 1 cut(s) | 268 |
| BsrBI | CCGCTC | 1 cut(s) | 394 |
| BsrFI | RCCGGY | 1 cut(s) | 357 |
| BssAI | RCCGGY | 1 cut(s) | 357 |
| BssECI | CCNNGG | 1 cut(s) | 297 |
| BssMI | GATC | 2 cut(s) | 172, 273 |
| Bst4CI | ACNGT | 2 cut(s) | 32, 353 |
| Bst6I | CTCTTC | 1 cut(s) | 503 |
| BstC8I | GCNNGC | 1 cut(s) | 342 |
| BstDEI | CTNAG | 3 cut(s) | 135, 463, 522 |
| BstDSI | CCRYGG | 1 cut(s) | 297 |
| BstF5I | GGATG | 1 cut(s) | 307 |
| BstKTI | GATC | 2 cut(s) | 175, 276 |
| BstMAI | GTCTC | 2 cut(s) | 103, 424 |
| BstMBI | GATC | 2 cut(s) | 172, 273 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 386 |
| BstNSI | RCATGY | 1 cut(s) | 161 |
| BstV1I | GCAGC | 1 cut(s) | 501 |
| BstX2I | RGATCY | 1 cut(s) | 273 |
| BstYI | RGATCY | 1 cut(s) | 273 |
| BsuRI | GGCC | 5 cut(s) | 59, 144, 264, 380, 389 |
| BtgI | CCRYGG | 1 cut(s) | 297 |
| BtsCI | GGATG | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 37 |
| Cac8I | GCNNGC | 1 cut(s) | 342 |
| Cfr10I | RCCGGY | 1 cut(s) | 357 |
| Cfr13I | GGNCC | 5 cut(s) | 57, 142, 263, 378, 387 |
| Csp6I | GTAC | 1 cut(s) | 213 |
| CspAI | ACCGGT | 1 cut(s) | 357 |
| CviAII | CATG | 6 cut(s) | 46, 61, 101, 158, 278, 312 |
| CviQI | GTAC | 1 cut(s) | 213 |
| DdeI | CTNAG | 3 cut(s) | 135, 463, 522 |
| DpnI | GATC | 2 cut(s) | 174, 275 |
| DpnII | GATC | 2 cut(s) | 172, 273 |
| Eam1104I | CTCTTC | 1 cut(s) | 503 |
| EarI | CTCTTC | 1 cut(s) | 503 |
| Eco57I | CTGAAG | 1 cut(s) | 290 |
| Eco88I | CYCGRG | 1 cut(s) | 456 |
| FaeI | CATG | 6 cut(s) | 49, 64, 104, 161, 281, 315 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 110, 142 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FatI | CATG | 6 cut(s) | 45, 60, 100, 157, 277, 311 |
| Fnu4HI | GCNGC | 1 cut(s) | 515 |
| FokI | GGATG | 1 cut(s) | 314 |
| Fsp4HI | GCNGC | 1 cut(s) | 515 |
| FspBI | CTAG | 3 cut(s) | 75, 282, 536 |
| GluI | GCNGC | 1 cut(s) | 515 |
| GsaI | CCCAGC | 2 cut(s) | 296, 545 |
| GsuI | CTGGAG | 1 cut(s) | 131 |
| HaeIII | GGCC | 5 cut(s) | 59, 144, 264, 380, 389 |
| HapII | CCGG | 2 cut(s) | 203, 358 |
| Hin1II | CATG | 6 cut(s) | 49, 64, 104, 161, 281, 315 |
| HincII | GTYRAC | 2 cut(s) | 43, 453 |
| HindII | GTYRAC | 2 cut(s) | 43, 453 |
| HinfI | GANTC | 1 cut(s) | 532 |
| HpaII | CCGG | 2 cut(s) | 203, 358 |
| HphI | GGTGA | 3 cut(s) | 103, 154, 476 |
| Hpy166II | GTNNAC | 3 cut(s) | 43, 155, 453 |
| Hpy188I | TCNGA | 1 cut(s) | 477 |
| Hpy8I | GTNNAC | 3 cut(s) | 43, 155, 453 |
| HpyAV | CCTTC | 1 cut(s) | 433 |
| HpyCH4III | ACNGT | 2 cut(s) | 32, 353 |
| HpyCH4IV | ACGT | 2 cut(s) | 17, 333 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 386 |
| HpyF3I | CTNAG | 3 cut(s) | 135, 463, 522 |
| HpySE526I | ACGT | 2 cut(s) | 17, 333 |
| Hsp92II | CATG | 6 cut(s) | 49, 64, 104, 161, 281, 315 |
| Kzo9I | GATC | 2 cut(s) | 172, 273 |
| LmnI | GCTCC | 1 cut(s) | 286 |
| Lsp1109I | GCAGC | 1 cut(s) | 501 |
| MaeI | CTAG | 3 cut(s) | 75, 282, 536 |
| MaeII | ACGT | 2 cut(s) | 17, 333 |
| MaeIII | GTNAC | 2 cut(s) | 160, 353 |
| MalI | GATC | 2 cut(s) | 174, 275 |
| MbiI | CCGCTC | 1 cut(s) | 394 |
| MboI | GATC | 2 cut(s) | 172, 273 |
| MboII | GAAGA | 3 cut(s) | 283, 517, 520 |
| MflI | RGATCY | 1 cut(s) | 273 |
| MhlI | GDGCHC | 1 cut(s) | 291 |
| MluCI | AATT | 2 cut(s) | 96, 436 |
| MmeI | TCCRAC | 1 cut(s) | 451 |
| MnlI | CCTC | 5 cut(s) | 155, 300, 383, 460, 504 |
| MroXI | GAANNNNTTC | 1 cut(s) | 10 |
| MseI | TTAA | 2 cut(s) | 225, 550 |
| MspI | CCGG | 2 cut(s) | 203, 358 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 386 |
| NdeII | GATC | 2 cut(s) | 172, 273 |
| NlaIII | CATG | 6 cut(s) | 49, 64, 104, 161, 281, 315 |
| NlaIV | GGNNCC | 1 cut(s) | 265 |
| NmeAIII | GCCGAG | 1 cut(s) | 415 |
| NmuCI | GTSAC | 2 cut(s) | 160, 353 |
| NspI | RCATGY | 1 cut(s) | 161 |
| PciI | ACATGT | 1 cut(s) | 157 |
| PdmI | GAANNNNTTC | 1 cut(s) | 10 |
| PfeI | GAWTC | 1 cut(s) | 532 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 66 |
| PinAI | ACCGGT | 1 cut(s) | 357 |
| PkrI | GCNGC | 1 cut(s) | 516 |
| PscI | ACATGT | 1 cut(s) | 157 |
| PspFI | CCCAGC | 2 cut(s) | 292, 541 |
| PspN4I | GGNNCC | 1 cut(s) | 265 |
| PspPI | GGNCC | 5 cut(s) | 57, 142, 263, 378, 387 |
| PsuI | RGATCY | 1 cut(s) | 273 |
| RsaI | GTAC | 1 cut(s) | 214 |
| RsaNI | GTAC | 1 cut(s) | 213 |
| SaqAI | TTAA | 2 cut(s) | 225, 550 |
| SatI | GCNGC | 1 cut(s) | 515 |
| Sau3AI | GATC | 2 cut(s) | 172, 273 |
| Sau96I | GGNCC | 5 cut(s) | 57, 142, 263, 378, 387 |
| SduI | GDGCHC | 1 cut(s) | 291 |
| SetI | ASST | 7 cut(s) | 20, 76, 93, 141, 167, 214, 336 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 386 |
| Sse9I | AATT | 2 cut(s) | 96, 436 |
| SsiI | CCGC | 2 cut(s) | 394, 494 |
| SspMI | CTAG | 3 cut(s) | 75, 282, 536 |
| TaaI | ACNGT | 2 cut(s) | 32, 353 |
| TaiI | ACGT | 2 cut(s) | 20, 336 |
| TasI | AATT | 2 cut(s) | 96, 436 |
| TfiI | GAWTC | 1 cut(s) | 532 |
| Tru1I | TTAA | 2 cut(s) | 225, 550 |
| Tru9I | TTAA | 2 cut(s) | 225, 550 |
| TscAI | CASTG | 1 cut(s) | 37 |
| TseFI | GTSAC | 2 cut(s) | 160, 353 |
| TseI | GCWGC | 1 cut(s) | 514 |
| Tsp45I | GTSAC | 2 cut(s) | 160, 353 |
| TspDTI | ATGAA | 3 cut(s) | 62, 89, 449 |
| TspGWI | ACGGA | 2 cut(s) | 167, 314 |
| TspRI | CASTG | 1 cut(s) | 37 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 66 |
| XapI | RAATTY | 2 cut(s) | 96, 436 |
| XceI | RCATGY | 1 cut(s) | 161 |
| XmnI | GAANNNNTTC | 1 cut(s) | 10 |
| XspI | CTAG | 3 cut(s) | 75, 282, 536 |