Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 122, 156, 413 |
| AfaI | GTAC | 2 cut(s) | 303, 444 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 23 |
| AgsI | TTSAA | 3 cut(s) | 163, 202, 453 |
| AjnI | CCWGG | 4 cut(s) | 131, 346, 362, 427 |
| AluBI | AGCT | 3 cut(s) | 476, 497, 503 |
| AluI | AGCT | 3 cut(s) | 476, 497, 503 |
| Alw21I | GWGCWC | 1 cut(s) | 478 |
| Alw26I | GTCTC | 1 cut(s) | 272 |
| Ama87I | CYCGRG | 1 cut(s) | 339 |
| AoxI | GGCC | 1 cut(s) | 134 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 38, 70 |
| AspS9I | GGNCC | 3 cut(s) | 135, 344, 431 |
| AsuHPI | GGTGA | 2 cut(s) | 227, 399 |
| AvaI | CYCGRG | 1 cut(s) | 339 |
| AvaII | GGWCC | 2 cut(s) | 344, 431 |
| BaeGI | GKGCMC | 1 cut(s) | 17 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 426, 459 |
| BanII | GRGCYC | 1 cut(s) | 478 |
| BauI | CACGAG | 1 cut(s) | 21 |
| Bbv12I | GWGCWC | 1 cut(s) | 478 |
| BciT130I | CCWGG | 4 cut(s) | 133, 348, 364, 429 |
| BcoDI | GTCTC | 1 cut(s) | 272 |
| BfaI | CTAG | 1 cut(s) | 243 |
| BglII | AGATCT | 1 cut(s) | 457 |
| BisI | GCNGC | 1 cut(s) | 123 |
| BlsI | GCNGC | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 4 cut(s) | 133, 348, 364, 429 |
| Bme18I | GGWCC | 2 cut(s) | 344, 431 |
| BmeT110I | CYCGRG | 1 cut(s) | 339 |
| BmgT120I | GGNCC | 3 cut(s) | 135, 344, 431 |
| BmiI | GGNNCC | 1 cut(s) | 345 |
| BmrFI | CCNGG | 4 cut(s) | 133, 348, 364, 429 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 463, 495 |
| Bsa29I | ATCGAT | 1 cut(s) | 226 |
| BsaJI | CCNNGG | 2 cut(s) | 347, 427 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 137, 167 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 23 |
| Bse1I | ACTGG | 1 cut(s) | 440 |
| BseBI | CCWGG | 4 cut(s) | 133, 348, 364, 429 |
| BseCI | ATCGAT | 1 cut(s) | 226 |
| BseDI | CCNNGG | 2 cut(s) | 347, 427 |
| BseGI | GGATG | 1 cut(s) | 304 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BseNI | ACTGG | 1 cut(s) | 440 |
| BseRI | GAGGAG | 2 cut(s) | 9, 468 |
| BseSI | GKGCMC | 1 cut(s) | 17 |
| BshFI | GGCC | 1 cut(s) | 136 |
| BshVI | ATCGAT | 1 cut(s) | 226 |
| BsiHKAI | GWGCWC | 1 cut(s) | 478 |
| BsiHKCI | CYCGRG | 1 cut(s) | 339 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BsmAI | GTCTC | 1 cut(s) | 272 |
| BsmI | GAATGC | 1 cut(s) | 158 |
| BsnI | GGCC | 1 cut(s) | 136 |
| BsoBI | CYCGRG | 1 cut(s) | 339 |
| Bsp1286I | GDGCHC | 2 cut(s) | 17, 478 |
| Bsp143I | GATC | 1 cut(s) | 457 |
| BspACI | CCGC | 3 cut(s) | 122, 156, 413 |
| BspANI | GGCC | 1 cut(s) | 136 |
| BspDI | ATCGAT | 1 cut(s) | 226 |
| BspLI | GGNNCC | 1 cut(s) | 345 |
| BsrI | ACTGG | 1 cut(s) | 440 |
| BssECI | CCNNGG | 2 cut(s) | 347, 427 |
| BssMI | GATC | 1 cut(s) | 457 |
| BssSI | CACGAG | 1 cut(s) | 21 |
| Bst2BI | CACGAG | 1 cut(s) | 21 |
| Bst2UI | CCWGG | 4 cut(s) | 133, 348, 364, 429 |
| Bst6I | CTCTTC | 1 cut(s) | 270 |
| BstF5I | GGATG | 1 cut(s) | 304 |
| BstKTI | GATC | 1 cut(s) | 460 |
| BstMAI | GTCTC | 1 cut(s) | 272 |
| BstMBI | GATC | 1 cut(s) | 457 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 128, 239 |
| BstNI | CCWGG | 4 cut(s) | 133, 348, 364, 429 |
| BstNSI | RCATGY | 1 cut(s) | 183 |
| BstSCI | CCNGG | 4 cut(s) | 131, 346, 362, 427 |
| BstSLI | GKGCMC | 1 cut(s) | 17 |
| BstX2I | RGATCY | 1 cut(s) | 457 |
| BstYI | RGATCY | 1 cut(s) | 457 |
| Bsu15I | ATCGAT | 1 cut(s) | 226 |
| BsuRI | GGCC | 1 cut(s) | 136 |
| BsuTUI | ATCGAT | 1 cut(s) | 226 |
| BtsCI | GGATG | 1 cut(s) | 304 |
| Cfr13I | GGNCC | 3 cut(s) | 135, 344, 431 |
| ClaI | ATCGAT | 1 cut(s) | 226 |
| CsiI | ACCWGGT | 1 cut(s) | 362 |
| Csp6I | GTAC | 2 cut(s) | 302, 443 |
| CviAII | CATG | 1 cut(s) | 180 |
| CviQI | GTAC | 2 cut(s) | 302, 443 |
| DpnI | GATC | 1 cut(s) | 459 |
| DpnII | GATC | 1 cut(s) | 457 |
| Eam1104I | CTCTTC | 1 cut(s) | 270 |
| EarI | CTCTTC | 1 cut(s) | 270 |
| Ecl136II | GAGCTC | 1 cut(s) | 476 |
| Eco24I | GRGCYC | 1 cut(s) | 478 |
| Eco47I | GGWCC | 2 cut(s) | 344, 431 |
| Eco53kI | GAGCTC | 1 cut(s) | 476 |
| Eco88I | CYCGRG | 1 cut(s) | 339 |
| EcoICRI | GAGCTC | 1 cut(s) | 476 |
| EcoO109I | RGGNCCY | 1 cut(s) | 135 |
| EcoRII | CCWGG | 4 cut(s) | 131, 346, 362, 427 |
| EcoT38I | GRGCYC | 1 cut(s) | 478 |
| FaeI | CATG | 1 cut(s) | 183 |
| FatI | CATG | 1 cut(s) | 179 |
| Fnu4HI | GCNGC | 1 cut(s) | 123 |
| FokI | GGATG | 1 cut(s) | 311 |
| FriOI | GRGCYC | 1 cut(s) | 478 |
| Fsp4HI | GCNGC | 1 cut(s) | 123 |
| FspBI | CTAG | 1 cut(s) | 243 |
| GluI | GCNGC | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 136 |
| Hin1II | CATG | 1 cut(s) | 183 |
| HinfI | GANTC | 1 cut(s) | 280 |
| HphI | GGTGA | 2 cut(s) | 227, 399 |
| Hpy188I | TCNGA | 2 cut(s) | 423, 469 |
| Hpy188III | TCNNGA | 1 cut(s) | 296 |
| HpyAV | CCTTC | 3 cut(s) | 21, 101, 414 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 128, 239 |
| Hsp92II | CATG | 1 cut(s) | 183 |
| Kzo9I | GATC | 1 cut(s) | 457 |
| LmnI | GCTCC | 1 cut(s) | 481 |
| MabI | ACCWGGT | 1 cut(s) | 362 |
| MaeI | CTAG | 1 cut(s) | 243 |
| MaeIII | GTNAC | 1 cut(s) | 351 |
| MalI | GATC | 1 cut(s) | 459 |
| MboI | GATC | 1 cut(s) | 457 |
| MboII | GAAGA | 3 cut(s) | 287, 323, 392 |
| MflI | RGATCY | 1 cut(s) | 457 |
| MhlI | GDGCHC | 2 cut(s) | 17, 478 |
| MlyI | GAGTC | 1 cut(s) | 274 |
| MnlI | CCTC | 8 cut(s) | 27, 30, 90, 163, 169, 242, 429, 489 |
| MslI | CAYNNNNRTG | 1 cut(s) | 327 |
| MspR9I | CCNGG | 4 cut(s) | 133, 348, 364, 429 |
| Mva1269I | GAATGC | 1 cut(s) | 158 |
| MvaI | CCWGG | 4 cut(s) | 133, 348, 364, 429 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 128, 239 |
| NdeII | GATC | 1 cut(s) | 457 |
| NlaIII | CATG | 1 cut(s) | 183 |
| NlaIV | GGNNCC | 1 cut(s) | 345 |
| NspI | RCATGY | 1 cut(s) | 183 |
| PctI | GAATGC | 1 cut(s) | 158 |
| PkrI | GCNGC | 1 cut(s) | 124 |
| PleI | GAGTC | 1 cut(s) | 274 |
| PpsI | GAGTC | 1 cut(s) | 274 |
| Psp124BI | GAGCTC | 1 cut(s) | 478 |
| Psp6I | CCWGG | 4 cut(s) | 131, 346, 362, 427 |
| PspGI | CCWGG | 4 cut(s) | 131, 346, 362, 427 |
| PspN4I | GGNNCC | 1 cut(s) | 345 |
| PspPI | GGNCC | 3 cut(s) | 135, 344, 431 |
| PsuI | RGATCY | 1 cut(s) | 457 |
| RsaI | GTAC | 2 cut(s) | 303, 444 |
| RsaNI | GTAC | 2 cut(s) | 302, 443 |
| RseI | CAYNNNNRTG | 1 cut(s) | 327 |
| SacI | GAGCTC | 1 cut(s) | 478 |
| SatI | GCNGC | 1 cut(s) | 123 |
| Sau3AI | GATC | 1 cut(s) | 457 |
| Sau96I | GGNCC | 3 cut(s) | 135, 344, 431 |
| SchI | GAGTC | 1 cut(s) | 274 |
| ScrFI | CCNGG | 4 cut(s) | 133, 348, 364, 429 |
| SduI | GDGCHC | 2 cut(s) | 17, 478 |
| SexAI | ACCWGGT | 1 cut(s) | 362 |
| SinI | GGWCC | 2 cut(s) | 344, 431 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 327 |
| SsiI | CCGC | 3 cut(s) | 122, 156, 413 |
| SspI | AATATT | 1 cut(s) | 43 |
| SspMI | CTAG | 1 cut(s) | 243 |
| SstI | GAGCTC | 1 cut(s) | 478 |
| StyD4I | CCNGG | 4 cut(s) | 131, 346, 362, 427 |
| TaqI | TCGA | 2 cut(s) | 190, 226 |
| TatI | WGTACW | 1 cut(s) | 301 |
| TauI | GCSGC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 2 cut(s) | 17, 120 |
| VpaK11BI | GGWCC | 2 cut(s) | 344, 431 |
| XceI | RCATGY | 1 cut(s) | 183 |
| XspI | CTAG | 1 cut(s) | 243 |