Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 458 |
| AclWI | GGATC | 1 cut(s) | 654 |
| AcsI | RAATTY | 1 cut(s) | 304 |
| AfaI | GTAC | 2 cut(s) | 82, 178 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 163, 597 |
| AgsI | TTSAA | 2 cut(s) | 112, 209 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 521 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 230, 262 |
| AluBI | AGCT | 2 cut(s) | 134, 362 |
| AluI | AGCT | 2 cut(s) | 134, 362 |
| Alw26I | GTCTC | 1 cut(s) | 502 |
| AlwI | GGATC | 1 cut(s) | 654 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 83 |
| ApeKI | GCWGC | 1 cut(s) | 359 |
| ApoI | RAATTY | 1 cut(s) | 304 |
| AspS9I | GGNCC | 1 cut(s) | 154 |
| AsuHPI | GGTGA | 2 cut(s) | 445, 472 |
| AvaII | GGWCC | 1 cut(s) | 154 |
| BbvI | GCAGC | 1 cut(s) | 371 |
| BcoDI | GTCTC | 1 cut(s) | 502 |
| BfaI | CTAG | 2 cut(s) | 87, 135 |
| BfmI | CTRYAG | 1 cut(s) | 129 |
| BisI | GCNGC | 1 cut(s) | 360 |
| BlsI | GCNGC | 1 cut(s) | 361 |
| Bme18I | GGWCC | 1 cut(s) | 154 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 521 |
| BmgT120I | GGNCC | 1 cut(s) | 154 |
| BmiI | GGNNCC | 1 cut(s) | 156 |
| BmsI | GCATC | 4 cut(s) | 27, 307, 393, 562 |
| BpmI | CTGGAG | 3 cut(s) | 409, 449, 661 |
| BsaI | GGTCTC | 1 cut(s) | 502 |
| BsaJI | CCNNGG | 1 cut(s) | 527 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 163, 597 |
| Bse1I | ACTGG | 1 cut(s) | 591 |
| BseDI | CCNNGG | 1 cut(s) | 527 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 163, 597 |
| BseMII | CTCAG | 1 cut(s) | 530 |
| BseNI | ACTGG | 1 cut(s) | 591 |
| BseRI | GAGGAG | 2 cut(s) | 20, 23 |
| BseXI | GCAGC | 1 cut(s) | 371 |
| BsgI | GTGCAG | 1 cut(s) | 53 |
| BslFI | GGGAC | 2 cut(s) | 140, 509 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 163, 597 |
| BsmAI | GTCTC | 1 cut(s) | 502 |
| BsmFI | GGGAC | 2 cut(s) | 140, 509 |
| Bso31I | GGTCTC | 1 cut(s) | 502 |
| Bsp143I | GATC | 1 cut(s) | 646 |
| BspACI | CCGC | 1 cut(s) | 458 |
| BspCNI | CTCAG | 1 cut(s) | 531 |
| BspLI | GGNNCC | 1 cut(s) | 156 |
| BspPI | GGATC | 1 cut(s) | 654 |
| BspTNI | GGTCTC | 1 cut(s) | 502 |
| BsrI | ACTGG | 1 cut(s) | 591 |
| BssECI | CCNNGG | 1 cut(s) | 527 |
| BssMI | GATC | 1 cut(s) | 646 |
| BssT1I | CCWWGG | 1 cut(s) | 527 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 275 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 1 cut(s) | 539 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstKTI | GATC | 1 cut(s) | 649 |
| BstMAI | GTCTC | 1 cut(s) | 502 |
| BstMBI | GATC | 1 cut(s) | 646 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 275 |
| BstNSI | RCATGY | 2 cut(s) | 171, 549 |
| BstSFI | CTRYAG | 1 cut(s) | 129 |
| BstV1I | GCAGC | 1 cut(s) | 371 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| CaiI | CAGNNNCTG | 1 cut(s) | 83 |
| Cfr13I | GGNCC | 1 cut(s) | 154 |
| Csp6I | GTAC | 2 cut(s) | 81, 177 |
| CviAII | CATG | 4 cut(s) | 168, 440, 488, 546 |
| CviJI | RGCY | 2 cut(s) | 134, 362 |
| CviKI_1 | RGCY | 2 cut(s) | 134, 362 |
| CviQI | GTAC | 2 cut(s) | 81, 177 |
| DdeI | CTNAG | 1 cut(s) | 539 |
| DpnI | GATC | 1 cut(s) | 648 |
| DpnII | GATC | 1 cut(s) | 646 |
| DriI | GACNNNNNGTC | 1 cut(s) | 521 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 521 |
| Eco130I | CCWWGG | 1 cut(s) | 527 |
| Eco31I | GGTCTC | 1 cut(s) | 502 |
| Eco47I | GGWCC | 1 cut(s) | 154 |
| EcoO109I | RGGNCCY | 1 cut(s) | 154 |
| EcoT14I | CCWWGG | 1 cut(s) | 527 |
| EcoT22I | ATGCAT | 2 cut(s) | 300, 577 |
| ErhI | CCWWGG | 1 cut(s) | 527 |
| FaeI | CATG | 4 cut(s) | 171, 443, 491, 549 |
| FaqI | GGGAC | 2 cut(s) | 140, 509 |
| FatI | CATG | 4 cut(s) | 167, 439, 487, 545 |
| FauNDI | CATATG | 1 cut(s) | 232 |
| Fnu4HI | GCNGC | 1 cut(s) | 360 |
| FokI | GGATG | 1 cut(s) | 209 |
| Fsp4HI | GCNGC | 1 cut(s) | 360 |
| FspBI | CTAG | 2 cut(s) | 87, 135 |
| GluI | GCNGC | 1 cut(s) | 360 |
| GsuI | CTGGAG | 3 cut(s) | 409, 449, 661 |
| Hin1II | CATG | 4 cut(s) | 171, 443, 491, 549 |
| HinfI | GANTC | 3 cut(s) | 90, 424, 436 |
| HphI | GGTGA | 2 cut(s) | 445, 472 |
| Hpy166II | GTNNAC | 1 cut(s) | 66 |
| Hpy188I | TCNGA | 1 cut(s) | 540 |
| Hpy188III | TCNNGA | 5 cut(s) | 49, 388, 428, 470, 678 |
| Hpy8I | GTNNAC | 1 cut(s) | 66 |
| HpyAV | CCTTC | 2 cut(s) | 97, 232 |
| HpyCH4V | TGCA | 9 cut(s) | 19, 34, 40, 219, 298, 325, 451, 545, 575 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 275 |
| HpyF3I | CTNAG | 1 cut(s) | 539 |
| Hsp92II | CATG | 4 cut(s) | 171, 443, 491, 549 |
| Kzo9I | GATC | 1 cut(s) | 646 |
| LmnI | GCTCC | 1 cut(s) | 661 |
| Lsp1109I | GCAGC | 1 cut(s) | 371 |
| LweI | GCATC | 4 cut(s) | 27, 307, 393, 562 |
| MaeI | CTAG | 2 cut(s) | 87, 135 |
| MalI | GATC | 1 cut(s) | 648 |
| MboI | GATC | 1 cut(s) | 646 |
| MboII | GAAGA | 2 cut(s) | 64, 664 |
| MfeI | CAATTG | 2 cut(s) | 204, 452 |
| MluCI | AATT | 9 cut(s) | 115, 204, 304, 337, 350, 373, 452, 603, 660 |
| MlyI | GAGTC | 1 cut(s) | 433 |
| MnlI | CCTC | 7 cut(s) | 16, 157, 384, 424, 456, 500, 546 |
| Mph1103I | ATGCAT | 2 cut(s) | 300, 577 |
| MseI | TTAA | 4 cut(s) | 372, 555, 561, 582 |
| MunI | CAATTG | 2 cut(s) | 204, 452 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 275 |
| NdeI | CATATG | 1 cut(s) | 232 |
| NdeII | GATC | 1 cut(s) | 646 |
| NlaIII | CATG | 4 cut(s) | 171, 443, 491, 549 |
| NlaIV | GGNNCC | 1 cut(s) | 156 |
| NsiI | ATGCAT | 2 cut(s) | 300, 577 |
| NspI | RCATGY | 2 cut(s) | 171, 549 |
| PfeI | GAWTC | 2 cut(s) | 90, 436 |
| PflFI | GACNNNGTC | 1 cut(s) | 225 |
| PkrI | GCNGC | 1 cut(s) | 361 |
| PleI | GAGTC | 1 cut(s) | 432 |
| PpsI | GAGTC | 1 cut(s) | 432 |
| PpuMI | RGGWCCY | 1 cut(s) | 154 |
| Psp5II | RGGWCCY | 1 cut(s) | 154 |
| PspN4I | GGNNCC | 1 cut(s) | 156 |
| PspPI | GGNCC | 1 cut(s) | 154 |
| PspPPI | RGGWCCY | 1 cut(s) | 154 |
| PstNI | CAGNNNCTG | 1 cut(s) | 83 |
| PsyI | GACNNNGTC | 1 cut(s) | 225 |
| RsaI | GTAC | 2 cut(s) | 82, 178 |
| RsaNI | GTAC | 2 cut(s) | 81, 177 |
| SaqAI | TTAA | 4 cut(s) | 372, 555, 561, 582 |
| SatI | GCNGC | 1 cut(s) | 360 |
| Sau3AI | GATC | 1 cut(s) | 646 |
| Sau96I | GGNCC | 1 cut(s) | 154 |
| SchI | GAGTC | 1 cut(s) | 433 |
| SfaNI | GCATC | 4 cut(s) | 27, 307, 393, 562 |
| SfcI | CTRYAG | 1 cut(s) | 129 |
| SinI | GGWCC | 1 cut(s) | 154 |
| Sse9I | AATT | 9 cut(s) | 115, 204, 304, 337, 350, 373, 452, 603, 660 |
| SsiI | CCGC | 1 cut(s) | 458 |
| SspI | AATATT | 1 cut(s) | 73 |
| SspMI | CTAG | 2 cut(s) | 87, 135 |
| StyI | CCWWGG | 1 cut(s) | 527 |
| TasI | AATT | 9 cut(s) | 115, 204, 304, 337, 350, 373, 452, 603, 660 |
| TatI | WGTACW | 1 cut(s) | 176 |
| TfiI | GAWTC | 2 cut(s) | 90, 436 |
| Tru1I | TTAA | 4 cut(s) | 372, 555, 561, 582 |
| Tru9I | TTAA | 4 cut(s) | 372, 555, 561, 582 |
| TseI | GCWGC | 1 cut(s) | 359 |
| TspDTI | ATGAA | 1 cut(s) | 213 |
| TspGWI | ACGGA | 1 cut(s) | 326 |
| Tth111I | GACNNNGTC | 1 cut(s) | 225 |
| VpaK11BI | GGWCC | 1 cut(s) | 154 |
| XapI | RAATTY | 1 cut(s) | 304 |
| XceI | RCATGY | 2 cut(s) | 171, 549 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 485 |
| XspI | CTAG | 2 cut(s) | 87, 135 |
| Zsp2I | ATGCAT | 2 cut(s) | 300, 577 |