Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 18, 116 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 81 |
| Alw21I | GWGCWC | 1 cut(s) | 100 |
| Alw26I | GTCTC | 1 cut(s) | 188 |
| AoxI | GGCC | 1 cut(s) | 72 |
| AspLEI | GCGC | 1 cut(s) | 139 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| AsuNHI | GCTAGC | 1 cut(s) | 158 |
| Bbv12I | GWGCWC | 1 cut(s) | 100 |
| BcoDI | GTCTC | 1 cut(s) | 188 |
| BfaI | CTAG | 2 cut(s) | 159, 224 |
| BmsI | GCATC | 2 cut(s) | 148, 205 |
| BmtI | GCTAGC | 1 cut(s) | 162 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 23, 55 |
| BsaJI | CCNNGG | 1 cut(s) | 245 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 1 cut(s) | 245 |
| BseGI | GGATG | 1 cut(s) | 91 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 81 |
| BseRI | GAGGAG | 2 cut(s) | 28, 206 |
| BshFI | GGCC | 1 cut(s) | 74 |
| BsiHKAI | GWGCWC | 1 cut(s) | 100 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 81 |
| BsmAI | GTCTC | 1 cut(s) | 188 |
| BsnI | GGCC | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 1 cut(s) | 100 |
| Bsp19I | CCATGG | 1 cut(s) | 245 |
| BspANI | GGCC | 1 cut(s) | 74 |
| BspOI | GCTAGC | 1 cut(s) | 162 |
| BssECI | CCNNGG | 1 cut(s) | 245 |
| BssT1I | CCWWGG | 1 cut(s) | 245 |
| Bst4CI | ACNGT | 1 cut(s) | 233 |
| Bst6I | CTCTTC | 1 cut(s) | 24 |
| BstC8I | GCNNGC | 2 cut(s) | 147, 160 |
| BstDSI | CCRYGG | 1 cut(s) | 245 |
| BstF5I | GGATG | 1 cut(s) | 91 |
| BstHHI | GCGC | 1 cut(s) | 139 |
| BstMAI | GTCTC | 1 cut(s) | 188 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNSI | RCATGY | 1 cut(s) | 113 |
| BsuRI | GGCC | 1 cut(s) | 74 |
| BtgI | CCRYGG | 1 cut(s) | 245 |
| BtsCI | GGATG | 1 cut(s) | 91 |
| BtsI | GCAGTG | 2 cut(s) | 18, 169 |
| BtsIMutI | CAGTG | 2 cut(s) | 18, 169 |
| Cac8I | GCNNGC | 2 cut(s) | 147, 160 |
| CfoI | GCGC | 1 cut(s) | 139 |
| Csp6I | GTAC | 2 cut(s) | 17, 115 |
| CviAII | CATG | 3 cut(s) | 101, 110, 246 |
| CviJI | RGCY | 3 cut(s) | 51, 74, 145 |
| CviKI_1 | RGCY | 3 cut(s) | 51, 74, 145 |
| CviQI | GTAC | 2 cut(s) | 17, 115 |
| Eam1104I | CTCTTC | 1 cut(s) | 24 |
| EarI | CTCTTC | 1 cut(s) | 24 |
| Eco130I | CCWWGG | 1 cut(s) | 245 |
| Eco147I | AGGCCT | 1 cut(s) | 74 |
| EcoT14I | CCWWGG | 1 cut(s) | 245 |
| ErhI | CCWWGG | 1 cut(s) | 245 |
| FaeI | CATG | 3 cut(s) | 104, 113, 249 |
| FaiI | YATR | 5 cut(s) | 102, 111, 184, 212, 247 |
| FatI | CATG | 3 cut(s) | 100, 109, 245 |
| FokI | GGATG | 1 cut(s) | 98 |
| FspBI | CTAG | 2 cut(s) | 159, 224 |
| GlaI | GCGC | 1 cut(s) | 138 |
| HaeIII | GGCC | 1 cut(s) | 74 |
| HhaI | GCGC | 1 cut(s) | 139 |
| Hin1II | CATG | 3 cut(s) | 104, 113, 249 |
| Hin6I | GCGC | 1 cut(s) | 137 |
| HinP1I | GCGC | 1 cut(s) | 137 |
| HinfI | GANTC | 3 cut(s) | 35, 167, 196 |
| HphI | GGTGA | 1 cut(s) | 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| HpyCH4III | ACNGT | 1 cut(s) | 233 |
| HpyCH4V | TGCA | 1 cut(s) | 218 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| Hsp92II | CATG | 3 cut(s) | 104, 113, 249 |
| HspAI | GCGC | 1 cut(s) | 137 |
| LpnPI | CCDG | 1 cut(s) | 119 |
| LweI | GCATC | 2 cut(s) | 148, 205 |
| MaeI | CTAG | 2 cut(s) | 159, 224 |
| MboII | GAAGA | 1 cut(s) | 41 |
| MhlI | GDGCHC | 1 cut(s) | 100 |
| MlyI | GAGTC | 2 cut(s) | 29, 190 |
| MnlI | CCTC | 4 cut(s) | 25, 49, 184, 220 |
| MseI | TTAA | 2 cut(s) | 69, 259 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NcoI | CCATGG | 1 cut(s) | 245 |
| NheI | GCTAGC | 1 cut(s) | 158 |
| NlaIII | CATG | 3 cut(s) | 104, 113, 249 |
| NspI | RCATGY | 1 cut(s) | 113 |
| PceI | AGGCCT | 1 cut(s) | 74 |
| PfeI | GAWTC | 1 cut(s) | 167 |
| PleI | GAGTC | 2 cut(s) | 29, 190 |
| PpsI | GAGTC | 2 cut(s) | 29, 190 |
| RsaI | GTAC | 2 cut(s) | 18, 116 |
| RsaNI | GTAC | 2 cut(s) | 17, 115 |
| SaqAI | TTAA | 2 cut(s) | 69, 259 |
| SchI | GAGTC | 2 cut(s) | 29, 190 |
| SduI | GDGCHC | 1 cut(s) | 100 |
| SetI | ASST | 2 cut(s) | 156, 259 |
| SfaNI | GCATC | 2 cut(s) | 148, 205 |
| SseBI | AGGCCT | 1 cut(s) | 74 |
| SspMI | CTAG | 2 cut(s) | 159, 224 |
| StuI | AGGCCT | 1 cut(s) | 74 |
| StyI | CCWWGG | 1 cut(s) | 245 |
| TaaI | ACNGT | 1 cut(s) | 233 |
| TfiI | GAWTC | 1 cut(s) | 167 |
| Tru1I | TTAA | 2 cut(s) | 69, 259 |
| Tru9I | TTAA | 2 cut(s) | 69, 259 |
| TscAI | CASTG | 2 cut(s) | 18, 169 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| TspRI | CASTG | 2 cut(s) | 18, 169 |
| XbaI | TCTAGA | 1 cut(s) | 223 |
| XceI | RCATGY | 1 cut(s) | 113 |
| XspI | CTAG | 2 cut(s) | 159, 224 |