Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-RVT | PF13966 | 18 - 62 | 2.2e-08 | zinc-binding in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 269 |
| AfaI | GTAC | 1 cut(s) | 424 |
| AgsI | TTSAA | 1 cut(s) | 443 |
| AhlI | ACTAGT | 1 cut(s) | 356 |
| AjnI | CCWGG | 1 cut(s) | 386 |
| AluBI | AGCT | 5 cut(s) | 52, 276, 309, 334, 470 |
| AluI | AGCT | 5 cut(s) | 52, 276, 309, 334, 470 |
| Alw21I | GWGCWC | 1 cut(s) | 199 |
| Alw26I | GTCTC | 1 cut(s) | 354 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 137 |
| Ama87I | CYCGRG | 1 cut(s) | 473 |
| AoxI | GGCC | 1 cut(s) | 384 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 52 |
| AspS9I | GGNCC | 1 cut(s) | 250 |
| AsuHPI | GGTGA | 1 cut(s) | 119 |
| AsuNHI | GCTAGC | 1 cut(s) | 466 |
| AvaI | CYCGRG | 1 cut(s) | 473 |
| AvaII | GGWCC | 1 cut(s) | 250 |
| BbsI | GAAGAC | 1 cut(s) | 8 |
| Bbv12I | GWGCWC | 1 cut(s) | 199 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 143, 177 |
| BciT130I | CCWGG | 1 cut(s) | 388 |
| BciVI | GTATCC | 1 cut(s) | 21 |
| BcoDI | GTCTC | 1 cut(s) | 354 |
| BcuI | ACTAGT | 1 cut(s) | 356 |
| BfaI | CTAG | 3 cut(s) | 273, 357, 467 |
| BfmI | CTRYAG | 1 cut(s) | 404 |
| BfuI | GTATCC | 1 cut(s) | 21 |
| Bme1390I | CCNGG | 1 cut(s) | 388 |
| Bme18I | GGWCC | 1 cut(s) | 250 |
| BmeT110I | CYCGRG | 1 cut(s) | 473 |
| BmgT120I | GGNCC | 1 cut(s) | 250 |
| BmrFI | CCNGG | 1 cut(s) | 388 |
| BmsI | GCATC | 1 cut(s) | 383 |
| BmtI | GCTAGC | 1 cut(s) | 470 |
| BpiI | GAAGAC | 1 cut(s) | 8 |
| Bpu10I | CCTNAGC | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BsaJI | CCNNGG | 1 cut(s) | 362 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 21, 51, 242, 272 |
| Bse1I | ACTGG | 1 cut(s) | 453 |
| Bse3DI | GCAATG | 2 cut(s) | 174, 426 |
| BseBI | CCWGG | 1 cut(s) | 388 |
| BseDI | CCNNGG | 1 cut(s) | 362 |
| BseGI | GGATG | 1 cut(s) | 89 |
| BseMI | GCAATG | 2 cut(s) | 174, 426 |
| BseNI | ACTGG | 1 cut(s) | 453 |
| BseRI | GAGGAG | 2 cut(s) | 189, 410 |
| BshFI | GGCC | 1 cut(s) | 386 |
| BsiHKAI | GWGCWC | 1 cut(s) | 199 |
| BsiHKCI | CYCGRG | 1 cut(s) | 473 |
| BsmAI | GTCTC | 1 cut(s) | 354 |
| BsnI | GGCC | 1 cut(s) | 386 |
| BsoBI | CYCGRG | 1 cut(s) | 473 |
| Bsp1286I | GDGCHC | 1 cut(s) | 199 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| BspANI | GGCC | 1 cut(s) | 386 |
| BspOI | GCTAGC | 1 cut(s) | 470 |
| BsrDI | GCAATG | 2 cut(s) | 174, 426 |
| BsrI | ACTGG | 1 cut(s) | 453 |
| BssECI | CCNNGG | 1 cut(s) | 362 |
| BssMI | GATC | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 1 cut(s) | 362 |
| Bst2UI | CCWGG | 1 cut(s) | 388 |
| BstC8I | GCNNGC | 1 cut(s) | 468 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstF5I | GGATG | 1 cut(s) | 89 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMAI | GTCTC | 1 cut(s) | 354 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstNI | CCWGG | 1 cut(s) | 388 |
| BstSCI | CCNGG | 1 cut(s) | 386 |
| BstSFI | CTRYAG | 1 cut(s) | 404 |
| BstV2I | GAAGAC | 1 cut(s) | 8 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 231 |
| BsuI | GTATCC | 1 cut(s) | 21 |
| BsuRI | GGCC | 1 cut(s) | 386 |
| BtsCI | GGATG | 1 cut(s) | 89 |
| BtsIMutI | CAGTG | 1 cut(s) | 224 |
| Cac8I | GCNNGC | 1 cut(s) | 468 |
| CaiI | CAGNNNCTG | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 1 cut(s) | 250 |
| Csp6I | GTAC | 1 cut(s) | 423 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 351, 386 |
| CviQI | GTAC | 1 cut(s) | 423 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 1 cut(s) | 362 |
| Eco47I | GGWCC | 1 cut(s) | 250 |
| Eco88I | CYCGRG | 1 cut(s) | 473 |
| EcoRII | CCWGG | 1 cut(s) | 386 |
| EcoT14I | CCWWGG | 1 cut(s) | 362 |
| ErhI | CCWWGG | 1 cut(s) | 362 |
| FaiI | YATR | 5 cut(s) | 35, 60, 304, 383, 393 |
| FblI | GTMKAC | 1 cut(s) | 269 |
| FokI | GGATG | 1 cut(s) | 76 |
| FspBI | CTAG | 3 cut(s) | 273, 357, 467 |
| HaeIII | GGCC | 1 cut(s) | 386 |
| HindIII | AAGCTT | 2 cut(s) | 50, 332 |
| HinfI | GANTC | 1 cut(s) | 134 |
| HphI | GGTGA | 1 cut(s) | 119 |
| Hpy166II | GTNNAC | 2 cut(s) | 270, 458 |
| Hpy188I | TCNGA | 1 cut(s) | 133 |
| Hpy188III | TCNNGA | 1 cut(s) | 164 |
| Hpy8I | GTNNAC | 2 cut(s) | 270, 458 |
| HpyAV | CCTTC | 2 cut(s) | 221, 225 |
| HpyCH4V | TGCA | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| LmnI | GCTCC | 3 cut(s) | 42, 202, 306 |
| LpnPI | CCDG | 6 cut(s) | 90, 233, 373, 392, 400, 466 |
| LweI | GCATC | 1 cut(s) | 383 |
| MaeI | CTAG | 3 cut(s) | 273, 357, 467 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MboII | GAAGA | 5 cut(s) | 8, 56, 59, 210, 328 |
| MhlI | GDGCHC | 1 cut(s) | 199 |
| MluCI | AATT | 2 cut(s) | 115, 262 |
| MnlI | CCTC | 4 cut(s) | 21, 210, 268, 388 |
| MroXI | GAANNNNTTC | 1 cut(s) | 52 |
| MseI | TTAA | 2 cut(s) | 86, 114 |
| MspR9I | CCNGG | 1 cut(s) | 388 |
| MvaI | CCWGG | 1 cut(s) | 388 |
| NdeII | GATC | 1 cut(s) | 109 |
| NheI | GCTAGC | 1 cut(s) | 466 |
| PdmI | GAANNNNTTC | 1 cut(s) | 52 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| Psp6I | CCWGG | 1 cut(s) | 386 |
| PspGI | CCWGG | 1 cut(s) | 386 |
| PspPI | GGNCC | 1 cut(s) | 250 |
| PstNI | CAGNNNCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 424 |
| RsaNI | GTAC | 1 cut(s) | 423 |
| SaqAI | TTAA | 2 cut(s) | 86, 114 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| Sau96I | GGNCC | 1 cut(s) | 250 |
| ScrFI | CCNGG | 1 cut(s) | 388 |
| SduI | GDGCHC | 1 cut(s) | 199 |
| SetI | ASST | 8 cut(s) | 54, 100, 278, 311, 336, 368, 421, 472 |
| SfaNI | GCATC | 1 cut(s) | 383 |
| SfcI | CTRYAG | 1 cut(s) | 404 |
| SinI | GGWCC | 1 cut(s) | 250 |
| SmlI | CTYRAG | 1 cut(s) | 149 |
| SmoI | CTYRAG | 1 cut(s) | 149 |
| SpeI | ACTAGT | 1 cut(s) | 356 |
| Sse9I | AATT | 2 cut(s) | 115, 262 |
| SspMI | CTAG | 3 cut(s) | 273, 357, 467 |
| StyD4I | CCNGG | 1 cut(s) | 386 |
| StyI | CCWWGG | 1 cut(s) | 362 |
| TaqI | TCGA | 2 cut(s) | 76, 163 |
| TaqII | GACCGA | 1 cut(s) | 267 |
| TasI | AATT | 2 cut(s) | 115, 262 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| Tru1I | TTAA | 2 cut(s) | 86, 114 |
| Tru9I | TTAA | 2 cut(s) | 86, 114 |
| TscAI | CASTG | 1 cut(s) | 231 |
| TspRI | CASTG | 1 cut(s) | 231 |
| VpaK11BI | GGWCC | 1 cut(s) | 250 |
| XmiI | GTMKAC | 1 cut(s) | 269 |
| XmnI | GAANNNNTTC | 1 cut(s) | 52 |
| XspI | CTAG | 3 cut(s) | 273, 357, 467 |