ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 251 |
| Acc65I | GGTACC | 1 cut(s) | 171 |
| AccB1I | GGYRCC | 1 cut(s) | 171 |
| AcsI | RAATTY | 3 cut(s) | 126, 269, 485 |
| AcuI | CTGAAG | 2 cut(s) | 33, 129 |
| AfaI | GTAC | 2 cut(s) | 173, 297 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 190 |
| AgsI | TTSAA | 3 cut(s) | 125, 220, 508 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 14, 46, 159, 191 |
| AluBI | AGCT | 3 cut(s) | 11, 113, 469 |
| AluI | AGCT | 3 cut(s) | 11, 113, 469 |
| ApeKI | GCWGC | 1 cut(s) | 58 |
| ApoI | RAATTY | 3 cut(s) | 126, 269, 485 |
| AseI | ATTAAT | 1 cut(s) | 66 |
| Asp718I | GGTACC | 1 cut(s) | 171 |
| AsuHPI | GGTGA | 1 cut(s) | 166 |
| BanI | GGYRCC | 1 cut(s) | 171 |
| BbvI | GCAGC | 1 cut(s) | 70 |
| BisI | GCNGC | 1 cut(s) | 59 |
| BlsI | GCNGC | 1 cut(s) | 60 |
| BmiI | GGNNCC | 1 cut(s) | 173 |
| BmrI | ACTGGG | 1 cut(s) | 264 |
| BmuI | ACTGGG | 1 cut(s) | 264 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| BsaJI | CCNNGG | 1 cut(s) | 175 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 190 |
| Bse1I | ACTGG | 2 cut(s) | 259, 502 |
| BseDI | CCNNGG | 1 cut(s) | 175 |
| BseGI | GGATG | 1 cut(s) | 203 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BseNI | ACTGG | 2 cut(s) | 259, 502 |
| BseXI | GCAGC | 1 cut(s) | 70 |
| BshNI | GGYRCC | 1 cut(s) | 171 |
| BslFI | GGGAC | 1 cut(s) | 48 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BsmFI | GGGAC | 1 cut(s) | 48 |
| BspHI | TCATGA | 1 cut(s) | 163 |
| BspLI | GGNNCC | 1 cut(s) | 173 |
| BspT107I | GGYRCC | 1 cut(s) | 171 |
| BsrI | ACTGG | 2 cut(s) | 259, 502 |
| BssECI | CCNNGG | 1 cut(s) | 175 |
| BssT1I | CCWWGG | 1 cut(s) | 175 |
| Bst4CI | ACNGT | 1 cut(s) | 171 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstF5I | GGATG | 1 cut(s) | 203 |
| BstV1I | GCAGC | 1 cut(s) | 70 |
| BtsCI | GGATG | 1 cut(s) | 203 |
| CciI | TCATGA | 1 cut(s) | 163 |
| Csp6I | GTAC | 2 cut(s) | 172, 296 |
| CviAII | CATG | 2 cut(s) | 164, 337 |
| CviJI | RGCY | 4 cut(s) | 11, 113, 413, 469 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 113, 413, 469 |
| CviQI | GTAC | 2 cut(s) | 172, 296 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco130I | CCWWGG | 1 cut(s) | 175 |
| Eco57I | CTGAAG | 2 cut(s) | 33, 129 |
| EcoT14I | CCWWGG | 1 cut(s) | 175 |
| ErhI | CCWWGG | 1 cut(s) | 175 |
| FaeI | CATG | 2 cut(s) | 167, 340 |
| FaiI | YATR | 8 cut(s) | 42, 75, 165, 210, 227, 251, 338, 367 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 282, 314 |
| FaqI | GGGAC | 1 cut(s) | 48 |
| FatI | CATG | 2 cut(s) | 163, 336 |
| Fnu4HI | GCNGC | 1 cut(s) | 59 |
| FokI | GGATG | 1 cut(s) | 210 |
| Fsp4HI | GCNGC | 1 cut(s) | 59 |
| GluI | GCNGC | 1 cut(s) | 59 |
| Hin1II | CATG | 2 cut(s) | 167, 340 |
| HindIII | AAGCTT | 2 cut(s) | 111, 467 |
| HinfI | GANTC | 3 cut(s) | 36, 180, 361 |
| HphI | GGTGA | 1 cut(s) | 166 |
| Hpy166II | GTNNAC | 1 cut(s) | 374 |
| Hpy188I | TCNGA | 3 cut(s) | 21, 133, 350 |
| Hpy188III | TCNNGA | 1 cut(s) | 164 |
| Hpy8I | GTNNAC | 1 cut(s) | 374 |
| HpyAV | CCTTC | 1 cut(s) | 256 |
| HpyCH4III | ACNGT | 1 cut(s) | 171 |
| Hsp92II | CATG | 2 cut(s) | 167, 340 |
| KpnI | GGTACC | 1 cut(s) | 175 |
| LpnPI | CCDG | 8 cut(s) | 39, 120, 176, 180, 240, 270, 399, 459 |
| Lsp1109I | GCAGC | 1 cut(s) | 70 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MluCI | AATT | 6 cut(s) | 67, 126, 269, 321, 485, 508 |
| MlyI | GAGTC | 3 cut(s) | 30, 174, 370 |
| MmeI | TCCRAC | 1 cut(s) | 350 |
| MnlI | CCTC | 4 cut(s) | 40, 235, 286, 391 |
| MseI | TTAA | 3 cut(s) | 66, 116, 511 |
| NlaIII | CATG | 2 cut(s) | 167, 340 |
| NlaIV | GGNNCC | 1 cut(s) | 173 |
| PagI | TCATGA | 1 cut(s) | 163 |
| PkrI | GCNGC | 1 cut(s) | 60 |
| PleI | GAGTC | 3 cut(s) | 30, 174, 369 |
| PpsI | GAGTC | 3 cut(s) | 30, 174, 369 |
| PshBI | ATTAAT | 1 cut(s) | 66 |
| PsiI | TTATAA | 1 cut(s) | 251 |
| PspN4I | GGNNCC | 1 cut(s) | 173 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 32 |
| RsaI | GTAC | 2 cut(s) | 173, 297 |
| RsaNI | GTAC | 2 cut(s) | 172, 296 |
| SaqAI | TTAA | 3 cut(s) | 66, 116, 511 |
| SatI | GCNGC | 1 cut(s) | 59 |
| SchI | GAGTC | 3 cut(s) | 30, 174, 370 |
| SmlI | CTYRAG | 1 cut(s) | 302 |
| SmoI | CTYRAG | 1 cut(s) | 302 |
| Sse9I | AATT | 6 cut(s) | 67, 126, 269, 321, 485, 508 |
| StyI | CCWWGG | 1 cut(s) | 175 |
| TaaI | ACNGT | 1 cut(s) | 171 |
| TaqI | TCGA | 1 cut(s) | 460 |
| TasI | AATT | 6 cut(s) | 67, 126, 269, 321, 485, 508 |
| Tru1I | TTAA | 3 cut(s) | 66, 116, 511 |
| Tru9I | TTAA | 3 cut(s) | 66, 116, 511 |
| TseI | GCWGC | 1 cut(s) | 58 |
| TspDTI | ATGAA | 5 cut(s) | 57, 62, 180, 242, 422 |
| VspI | ATTAAT | 1 cut(s) | 66 |
| XapI | RAATTY | 3 cut(s) | 126, 269, 485 |