Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 329 |
| AccB1I | GGYRCC | 1 cut(s) | 13 |
| AccII | CGCG | 3 cut(s) | 67, 69, 348 |
| AciI | CCGC | 1 cut(s) | 263 |
| AcsI | RAATTY | 1 cut(s) | 89 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 48, 49 |
| AgsI | TTSAA | 2 cut(s) | 29, 193 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| AluBI | AGCT | 2 cut(s) | 25, 80 |
| AluI | AGCT | 2 cut(s) | 25, 80 |
| Alw26I | GTCTC | 3 cut(s) | 48, 174, 274 |
| ApeKI | GCWGC | 2 cut(s) | 22, 80 |
| ApoI | RAATTY | 1 cut(s) | 89 |
| AseI | ATTAAT | 1 cut(s) | 198 |
| AspLEI | GCGC | 2 cut(s) | 69, 71 |
| AsuHPI | GGTGA | 2 cut(s) | 117, 235 |
| BanI | GGYRCC | 1 cut(s) | 13 |
| BbvI | GCAGC | 2 cut(s) | 34, 67 |
| BccI | CCATC | 1 cut(s) | 200 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BcoDI | GTCTC | 3 cut(s) | 48, 174, 274 |
| BfmI | CTRYAG | 1 cut(s) | 20 |
| BisI | GCNGC | 3 cut(s) | 23, 81, 264 |
| BlsI | GCNGC | 3 cut(s) | 24, 82, 265 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmiI | GGNNCC | 1 cut(s) | 15 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 139 |
| BpmI | CTGGAG | 1 cut(s) | 31 |
| BsaI | GGTCTC | 1 cut(s) | 174 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 237, 267 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 48, 49 |
| Bse3DI | GCAATG | 1 cut(s) | 288 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 48, 49 |
| BseMI | GCAATG | 1 cut(s) | 288 |
| BsePI | GCGCGC | 1 cut(s) | 67 |
| BseRI | GAGGAG | 1 cut(s) | 162 |
| BseXI | GCAGC | 2 cut(s) | 34, 67 |
| BsgI | GTGCAG | 1 cut(s) | 391 |
| Bsh1236I | CGCG | 3 cut(s) | 67, 69, 348 |
| BshNI | GGYRCC | 1 cut(s) | 13 |
| BslFI | GGGAC | 1 cut(s) | 112 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 48, 49 |
| BsmAI | GTCTC | 3 cut(s) | 48, 174, 274 |
| BsmFI | GGGAC | 1 cut(s) | 112 |
| BsmI | GAATGC | 1 cut(s) | 265 |
| Bso31I | GGTCTC | 1 cut(s) | 174 |
| Bsp143I | GATC | 1 cut(s) | 162 |
| BspACI | CCGC | 1 cut(s) | 263 |
| BspFNI | CGCG | 3 cut(s) | 67, 69, 348 |
| BspLI | GGNNCC | 1 cut(s) | 15 |
| BspMAI | CTGCAG | 1 cut(s) | 24 |
| BspT107I | GGYRCC | 1 cut(s) | 13 |
| BspTNI | GGTCTC | 1 cut(s) | 174 |
| BsrDI | GCAATG | 1 cut(s) | 288 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssHII | GCGCGC | 1 cut(s) | 67 |
| BssMI | GATC | 1 cut(s) | 162 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 2 cut(s) | 33, 334 |
| Bst6I | CTCTTC | 1 cut(s) | 313 |
| BstC8I | GCNNGC | 2 cut(s) | 69, 393 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstFNI | CGCG | 3 cut(s) | 67, 69, 348 |
| BstHHI | GCGC | 2 cut(s) | 69, 71 |
| BstKTI | GATC | 1 cut(s) | 165 |
| BstMAI | GTCTC | 3 cut(s) | 48, 174, 274 |
| BstMBI | GATC | 1 cut(s) | 162 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 22, 66, 77 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstNSI | RCATGY | 1 cut(s) | 395 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BstSFI | CTRYAG | 1 cut(s) | 20 |
| BstUI | CGCG | 3 cut(s) | 67, 69, 348 |
| BstV1I | GCAGC | 2 cut(s) | 34, 67 |
| BtsI | GCAGTG | 1 cut(s) | 17 |
| BtsIMutI | CAGTG | 1 cut(s) | 17 |
| Cac8I | GCNNGC | 2 cut(s) | 69, 393 |
| CfoI | GCGC | 2 cut(s) | 69, 71 |
| CviAII | CATG | 3 cut(s) | 107, 213, 392 |
| CviJI | RGCY | 3 cut(s) | 25, 80, 266 |
| CviKI_1 | RGCY | 3 cut(s) | 25, 80, 266 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 1 cut(s) | 164 |
| DpnII | GATC | 1 cut(s) | 162 |
| Eam1104I | CTCTTC | 1 cut(s) | 313 |
| EarI | CTCTTC | 1 cut(s) | 313 |
| Eco31I | GGTCTC | 1 cut(s) | 174 |
| EcoRI | GAATTC | 1 cut(s) | 89 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| FaeI | CATG | 3 cut(s) | 110, 216, 395 |
| FaiI | YATR | 8 cut(s) | 108, 161, 214, 236, 329, 357, 365, 393 |
| FaqI | GGGAC | 1 cut(s) | 112 |
| FatI | CATG | 3 cut(s) | 106, 212, 391 |
| Fnu4HI | GCNGC | 3 cut(s) | 23, 81, 264 |
| Fsp4HI | GCNGC | 3 cut(s) | 23, 81, 264 |
| GlaI | GCGC | 2 cut(s) | 68, 70 |
| GluI | GCNGC | 3 cut(s) | 23, 81, 264 |
| GsuI | CTGGAG | 1 cut(s) | 31 |
| HhaI | GCGC | 2 cut(s) | 69, 71 |
| Hin1II | CATG | 3 cut(s) | 110, 216, 395 |
| Hin6I | GCGC | 2 cut(s) | 67, 69 |
| HinP1I | GCGC | 2 cut(s) | 67, 69 |
| HinfI | GANTC | 1 cut(s) | 155 |
| HphI | GGTGA | 2 cut(s) | 117, 235 |
| Hpy188III | TCNNGA | 1 cut(s) | 146 |
| HpyCH4III | ACNGT | 2 cut(s) | 33, 334 |
| HpyCH4IV | ACGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 4 cut(s) | 22, 281, 372, 395 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 22, 66, 77 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| HpySE526I | ACGT | 1 cut(s) | 132 |
| Hsp92II | CATG | 3 cut(s) | 110, 216, 395 |
| HspAI | GCGC | 2 cut(s) | 67, 69 |
| Kzo9I | GATC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 43 |
| LpnPI | CCDG | 5 cut(s) | 34, 61, 151, 159, 227 |
| Lsp1109I | GCAGC | 2 cut(s) | 34, 67 |
| LweI | GCATC | 1 cut(s) | 139 |
| MaeII | ACGT | 1 cut(s) | 132 |
| MaeIII | GTNAC | 2 cut(s) | 123, 334 |
| MalI | GATC | 1 cut(s) | 164 |
| MboI | GATC | 1 cut(s) | 162 |
| MboII | GAAGA | 2 cut(s) | 205, 300 |
| MluCI | AATT | 4 cut(s) | 89, 199, 298, 358 |
| MlyI | GAGTC | 1 cut(s) | 149 |
| MnlI | CCTC | 3 cut(s) | 53, 183, 189 |
| MseI | TTAA | 1 cut(s) | 198 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| Mva1269I | GAATGC | 1 cut(s) | 265 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| MvnI | CGCG | 3 cut(s) | 67, 69, 348 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 22, 66, 77 |
| NdeII | GATC | 1 cut(s) | 162 |
| NlaIII | CATG | 3 cut(s) | 110, 216, 395 |
| NlaIV | GGNNCC | 1 cut(s) | 15 |
| NmuCI | GTSAC | 2 cut(s) | 123, 334 |
| NspI | RCATGY | 1 cut(s) | 395 |
| PaeI | GCATGC | 1 cut(s) | 395 |
| PauI | GCGCGC | 1 cut(s) | 67 |
| PctI | GAATGC | 1 cut(s) | 265 |
| PkrI | GCNGC | 3 cut(s) | 24, 82, 265 |
| PleI | GAGTC | 1 cut(s) | 149 |
| PpsI | GAGTC | 1 cut(s) | 149 |
| PshBI | ATTAAT | 1 cut(s) | 198 |
| PsiI | TTATAA | 1 cut(s) | 329 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| PspN4I | GGNNCC | 1 cut(s) | 15 |
| PstI | CTGCAG | 1 cut(s) | 24 |
| PteI | GCGCGC | 1 cut(s) | 67 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| SatI | GCNGC | 3 cut(s) | 23, 81, 264 |
| Sau3AI | GATC | 1 cut(s) | 162 |
| SchI | GAGTC | 1 cut(s) | 149 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 4 cut(s) | 27, 82, 135, 225 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SfcI | CTRYAG | 1 cut(s) | 20 |
| SphI | GCATGC | 1 cut(s) | 395 |
| Sse9I | AATT | 4 cut(s) | 89, 199, 298, 358 |
| SsiI | CCGC | 1 cut(s) | 263 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TaaI | ACNGT | 2 cut(s) | 33, 334 |
| TaiI | ACGT | 1 cut(s) | 135 |
| TasI | AATT | 4 cut(s) | 89, 199, 298, 358 |
| TauI | GCSGC | 1 cut(s) | 266 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TseFI | GTSAC | 2 cut(s) | 123, 334 |
| TseI | GCWGC | 2 cut(s) | 22, 80 |
| Tsp45I | GTSAC | 2 cut(s) | 123, 334 |
| TspDTI | ATGAA | 1 cut(s) | 352 |
| TspRI | CASTG | 1 cut(s) | 24 |
| VspI | ATTAAT | 1 cut(s) | 198 |
| XapI | RAATTY | 1 cut(s) | 89 |
| XceI | RCATGY | 1 cut(s) | 395 |