ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 451 |
| AciI | CCGC | 2 cut(s) | 122, 766 |
| AcuI | CTGAAG | 1 cut(s) | 323 |
| AfaI | GTAC | 1 cut(s) | 742 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| AgsI | TTSAA | 4 cut(s) | 255, 415, 598, 706 |
| AjnI | CCWGG | 1 cut(s) | 388 |
| AleI | CACNNNNGTG | 1 cut(s) | 28 |
| AluBI | AGCT | 4 cut(s) | 133, 292, 468, 649 |
| AluI | AGCT | 4 cut(s) | 133, 292, 468, 649 |
| ApeKI | GCWGC | 1 cut(s) | 18 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 182 |
| AspS9I | GGNCC | 1 cut(s) | 514 |
| AvaII | GGWCC | 1 cut(s) | 514 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 260, 293 |
| BanI | GGYRCC | 1 cut(s) | 451 |
| BauI | CACGAG | 1 cut(s) | 670 |
| BbvI | GCAGC | 1 cut(s) | 30 |
| BccI | CCATC | 2 cut(s) | 220, 567 |
| BciT130I | CCWGG | 1 cut(s) | 390 |
| BclI | TGATCA | 1 cut(s) | 622 |
| BfaI | CTAG | 2 cut(s) | 347, 486 |
| BisI | GCNGC | 1 cut(s) | 19 |
| BlpI | GCTNAGC | 1 cut(s) | 360 |
| BlsI | GCNGC | 1 cut(s) | 20 |
| BmcAI | AGTACT | 1 cut(s) | 742 |
| Bme1390I | CCNGG | 1 cut(s) | 390 |
| Bme18I | GGWCC | 1 cut(s) | 514 |
| BmgT120I | GGNCC | 1 cut(s) | 514 |
| BmiI | GGNNCC | 2 cut(s) | 453, 523 |
| BmrFI | CCNGG | 1 cut(s) | 390 |
| Bpu10I | CCTNAGC | 1 cut(s) | 153 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 360 |
| BsaJI | CCNNGG | 1 cut(s) | 517 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseBI | CCWGG | 1 cut(s) | 390 |
| BseDI | CCNNGG | 1 cut(s) | 517 |
| BseGI | GGATG | 4 cut(s) | 637, 688, 718, 730 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseMII | CTCAG | 1 cut(s) | 167 |
| BseXI | GCAGC | 1 cut(s) | 30 |
| BshNI | GGYRCC | 1 cut(s) | 451 |
| BsiSI | CCGG | 1 cut(s) | 164 |
| BslFI | GGGAC | 1 cut(s) | 341 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 341 |
| Bsp143I | GATC | 2 cut(s) | 211, 622 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 360 |
| BspACI | CCGC | 2 cut(s) | 122, 766 |
| BspCNI | CTCAG | 1 cut(s) | 166 |
| BspLI | GGNNCC | 2 cut(s) | 453, 523 |
| BspQI | GCTCTTC | 2 cut(s) | 165, 458 |
| BspT107I | GGYRCC | 1 cut(s) | 451 |
| BssECI | CCNNGG | 1 cut(s) | 517 |
| BssMI | GATC | 2 cut(s) | 211, 622 |
| BssSI | CACGAG | 1 cut(s) | 670 |
| Bst2BI | CACGAG | 1 cut(s) | 670 |
| Bst2UI | CCWGG | 1 cut(s) | 390 |
| Bst6I | CTCTTC | 2 cut(s) | 165, 458 |
| BstDEI | CTNAG | 3 cut(s) | 153, 360, 581 |
| BstDSI | CCRYGG | 1 cut(s) | 517 |
| BstF5I | GGATG | 4 cut(s) | 637, 688, 718, 730 |
| BstKTI | GATC | 2 cut(s) | 214, 625 |
| BstMBI | GATC | 2 cut(s) | 211, 622 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 164, 356, 370 |
| BstNI | CCWGG | 1 cut(s) | 390 |
| BstSCI | CCNGG | 1 cut(s) | 388 |
| BstV1I | GCAGC | 1 cut(s) | 30 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 30, 389 |
| BtgI | CCRYGG | 1 cut(s) | 517 |
| BtsCI | GGATG | 4 cut(s) | 637, 688, 718, 730 |
| Cfr13I | GGNCC | 1 cut(s) | 514 |
| CseI | GACGC | 1 cut(s) | 537 |
| CsiI | ACCWGGT | 1 cut(s) | 388 |
| Csp6I | GTAC | 1 cut(s) | 741 |
| CviAII | CATG | 2 cut(s) | 644, 692 |
| CviQI | GTAC | 1 cut(s) | 741 |
| DdeI | CTNAG | 3 cut(s) | 153, 360, 581 |
| DpnI | GATC | 2 cut(s) | 213, 624 |
| DpnII | GATC | 2 cut(s) | 211, 622 |
| DraI | TTTAAA | 1 cut(s) | 495 |
| Eam1104I | CTCTTC | 2 cut(s) | 165, 458 |
| EarI | CTCTTC | 2 cut(s) | 165, 458 |
| Eco47I | GGWCC | 1 cut(s) | 514 |
| Eco57I | CTGAAG | 1 cut(s) | 323 |
| EcoRII | CCWGG | 1 cut(s) | 388 |
| FaeI | CATG | 2 cut(s) | 647, 695 |
| FaqI | GGGAC | 1 cut(s) | 341 |
| FatI | CATG | 2 cut(s) | 643, 691 |
| FauI | CCCGC | 1 cut(s) | 115 |
| FauNDI | CATATG | 2 cut(s) | 169, 527 |
| FbaI | TGATCA | 1 cut(s) | 622 |
| Fnu4HI | GCNGC | 1 cut(s) | 19 |
| FokI | GGATG | 4 cut(s) | 644, 695, 725, 737 |
| Fsp4HI | GCNGC | 1 cut(s) | 19 |
| FspBI | CTAG | 2 cut(s) | 347, 486 |
| GluI | GCNGC | 1 cut(s) | 19 |
| HapII | CCGG | 1 cut(s) | 164 |
| HgaI | GACGC | 1 cut(s) | 537 |
| Hin1II | CATG | 2 cut(s) | 647, 695 |
| HindIII | AAGCTT | 1 cut(s) | 290 |
| HinfI | GANTC | 4 cut(s) | 75, 251, 662, 771 |
| HpaII | CCGG | 1 cut(s) | 164 |
| Hpy188I | TCNGA | 2 cut(s) | 462, 504 |
| Hpy188III | TCNNGA | 2 cut(s) | 79, 326 |
| HpyAV | CCTTC | 3 cut(s) | 298, 499, 559 |
| HpyCH4V | TGCA | 2 cut(s) | 297, 338 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 164, 356, 370 |
| HpyF3I | CTNAG | 3 cut(s) | 153, 360, 581 |
| Hsp92II | CATG | 2 cut(s) | 647, 695 |
| Ksp22I | TGATCA | 1 cut(s) | 622 |
| Kzo9I | GATC | 2 cut(s) | 211, 622 |
| LguI | GCTCTTC | 2 cut(s) | 165, 458 |
| LpnPI | CCDG | 8 cut(s) | 92, 140, 177, 375, 395, 402, 466, 611 |
| Lsp1109I | GCAGC | 1 cut(s) | 30 |
| MabI | ACCWGGT | 1 cut(s) | 388 |
| MaeI | CTAG | 2 cut(s) | 347, 486 |
| MaeIII | GTNAC | 1 cut(s) | 687 |
| MalI | GATC | 2 cut(s) | 213, 624 |
| MboI | GATC | 2 cut(s) | 211, 622 |
| MboII | GAAGA | 4 cut(s) | 152, 206, 277, 475 |
| MluCI | AATT | 4 cut(s) | 178, 435, 651, 677 |
| MlyI | GAGTC | 1 cut(s) | 84 |
| MnlI | CCTC | 7 cut(s) | 255, 301, 360, 442, 597, 703, 715 |
| MroXI | GAANNNNTTC | 1 cut(s) | 182 |
| MseI | TTAA | 5 cut(s) | 66, 141, 342, 494, 555 |
| MslI | CAYNNNNRTG | 1 cut(s) | 28 |
| MspI | CCGG | 1 cut(s) | 164 |
| MspR9I | CCNGG | 1 cut(s) | 390 |
| MvaI | CCWGG | 1 cut(s) | 390 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 164, 356, 370 |
| NdeI | CATATG | 2 cut(s) | 169, 527 |
| NdeII | GATC | 2 cut(s) | 211, 622 |
| NlaIII | CATG | 2 cut(s) | 647, 695 |
| NlaIV | GGNNCC | 2 cut(s) | 453, 523 |
| OliI | CACNNNNGTG | 1 cut(s) | 28 |
| PciSI | GCTCTTC | 2 cut(s) | 165, 458 |
| PdmI | GAANNNNTTC | 1 cut(s) | 182 |
| PfeI | GAWTC | 3 cut(s) | 251, 662, 771 |
| PkrI | GCNGC | 1 cut(s) | 20 |
| PleI | GAGTC | 1 cut(s) | 83 |
| PpsI | GAGTC | 1 cut(s) | 83 |
| Psp6I | CCWGG | 1 cut(s) | 388 |
| PspGI | CCWGG | 1 cut(s) | 388 |
| PspN4I | GGNNCC | 2 cut(s) | 453, 523 |
| PspPI | GGNCC | 1 cut(s) | 514 |
| RsaI | GTAC | 1 cut(s) | 742 |
| RsaNI | GTAC | 1 cut(s) | 741 |
| RseI | CAYNNNNRTG | 1 cut(s) | 28 |
| SapI | GCTCTTC | 2 cut(s) | 165, 458 |
| SaqAI | TTAA | 5 cut(s) | 66, 141, 342, 494, 555 |
| SatI | GCNGC | 1 cut(s) | 19 |
| Sau3AI | GATC | 2 cut(s) | 211, 622 |
| Sau96I | GGNCC | 1 cut(s) | 514 |
| ScaI | AGTACT | 1 cut(s) | 742 |
| SchI | GAGTC | 1 cut(s) | 84 |
| ScrFI | CCNGG | 1 cut(s) | 390 |
| SexAI | ACCWGGT | 1 cut(s) | 388 |
| SinI | GGWCC | 1 cut(s) | 514 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 28 |
| Sse9I | AATT | 4 cut(s) | 178, 435, 651, 677 |
| SsiI | CCGC | 2 cut(s) | 122, 766 |
| SspMI | CTAG | 2 cut(s) | 347, 486 |
| StyD4I | CCNGG | 1 cut(s) | 388 |
| TasI | AATT | 4 cut(s) | 178, 435, 651, 677 |
| TatI | WGTACW | 1 cut(s) | 740 |
| TfiI | GAWTC | 3 cut(s) | 251, 662, 771 |
| Tru1I | TTAA | 5 cut(s) | 66, 141, 342, 494, 555 |
| Tru9I | TTAA | 5 cut(s) | 66, 141, 342, 494, 555 |
| TseI | GCWGC | 1 cut(s) | 18 |
| TspDTI | ATGAA | 3 cut(s) | 17, 191, 206 |
| TspGWI | ACGGA | 2 cut(s) | 506, 674 |
| VpaK11BI | GGWCC | 1 cut(s) | 514 |
| XmnI | GAANNNNTTC | 1 cut(s) | 182 |
| XspI | CTAG | 2 cut(s) | 347, 486 |
| ZrmI | AGTACT | 1 cut(s) | 742 |