Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 429 |
| AccI | GTMKAC | 1 cut(s) | 52 |
| AciI | CCGC | 1 cut(s) | 755 |
| AclWI | GGATC | 1 cut(s) | 267 |
| AcsI | RAATTY | 2 cut(s) | 139, 501 |
| AfaI | GTAC | 2 cut(s) | 662, 747 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 717 |
| AgsI | TTSAA | 3 cut(s) | 221, 734, 866 |
| AhlI | ACTAGT | 1 cut(s) | 322 |
| AjnI | CCWGG | 1 cut(s) | 656 |
| AluBI | AGCT | 4 cut(s) | 63, 206, 310, 822 |
| AluI | AGCT | 4 cut(s) | 63, 206, 310, 822 |
| Alw26I | GTCTC | 1 cut(s) | 474 |
| AlwI | GGATC | 1 cut(s) | 267 |
| AoxI | GGCC | 2 cut(s) | 384, 740 |
| ApeKI | GCWGC | 2 cut(s) | 203, 822 |
| ApoI | RAATTY | 2 cut(s) | 139, 501 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 845 |
| AspS9I | GGNCC | 1 cut(s) | 385 |
| AsuHPI | GGTGA | 4 cut(s) | 148, 443, 696, 788 |
| AxyI | CCTNAGG | 1 cut(s) | 124 |
| BbvI | GCAGC | 2 cut(s) | 215, 809 |
| BccI | CCATC | 3 cut(s) | 36, 715, 773 |
| BciT130I | CCWGG | 1 cut(s) | 658 |
| BcoDI | GTCTC | 1 cut(s) | 474 |
| BcuI | ACTAGT | 1 cut(s) | 322 |
| BfaI | CTAG | 2 cut(s) | 323, 593 |
| BfuAI | ACCTGC | 1 cut(s) | 429 |
| BisI | GCNGC | 2 cut(s) | 204, 823 |
| BlpI | GCTNAGC | 1 cut(s) | 64 |
| BlsI | GCNGC | 2 cut(s) | 205, 824 |
| BmcAI | AGTACT | 1 cut(s) | 747 |
| Bme1390I | CCNGG | 1 cut(s) | 658 |
| BmgT120I | GGNCC | 1 cut(s) | 385 |
| BmrFI | CCNGG | 1 cut(s) | 658 |
| BmsI | GCATC | 1 cut(s) | 676 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 64 |
| BsaBI | GATNNNNATC | 1 cut(s) | 371 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 717 |
| Bse1I | ACTGG | 1 cut(s) | 743 |
| Bse21I | CCTNAGG | 1 cut(s) | 124 |
| Bse8I | GATNNNNATC | 1 cut(s) | 371 |
| BseBI | CCWGG | 1 cut(s) | 658 |
| BseGI | GGATG | 2 cut(s) | 691, 707 |
| BseJI | GATNNNNATC | 1 cut(s) | 371 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 717 |
| BseMII | CTCAG | 2 cut(s) | 78, 138 |
| BseNI | ACTGG | 1 cut(s) | 743 |
| BseXI | GCAGC | 2 cut(s) | 215, 809 |
| BsgI | GTGCAG | 1 cut(s) | 532 |
| BshFI | GGCC | 2 cut(s) | 386, 742 |
| BslFI | GGGAC | 1 cut(s) | 796 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 717 |
| BsmAI | GTCTC | 1 cut(s) | 474 |
| BsmFI | GGGAC | 1 cut(s) | 796 |
| BsmI | GAATGC | 2 cut(s) | 577, 726 |
| BsnI | GGCC | 2 cut(s) | 386, 742 |
| Bsp143I | GATC | 1 cut(s) | 272 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 64 |
| BspACI | CCGC | 1 cut(s) | 755 |
| BspANI | GGCC | 2 cut(s) | 386, 742 |
| BspCNI | CTCAG | 2 cut(s) | 77, 137 |
| BspMI | ACCTGC | 1 cut(s) | 429 |
| BspPI | GGATC | 1 cut(s) | 267 |
| BspQI | GCTCTTC | 1 cut(s) | 716 |
| BsrI | ACTGG | 1 cut(s) | 743 |
| BssMI | GATC | 1 cut(s) | 272 |
| BssNAI | GTATAC | 1 cut(s) | 53 |
| Bst1107I | GTATAC | 1 cut(s) | 53 |
| Bst2UI | CCWGG | 1 cut(s) | 658 |
| Bst4CI | ACNGT | 3 cut(s) | 402, 797, 857 |
| Bst6I | CTCTTC | 1 cut(s) | 716 |
| BstDEI | CTNAG | 3 cut(s) | 64, 124, 347 |
| BstF5I | GGATG | 2 cut(s) | 691, 707 |
| BstKTI | GATC | 1 cut(s) | 275 |
| BstMAI | GTCTC | 1 cut(s) | 474 |
| BstMBI | GATC | 1 cut(s) | 272 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 290 |
| BstNI | CCWGG | 1 cut(s) | 658 |
| BstSCI | CCNGG | 1 cut(s) | 656 |
| BstV1I | GCAGC | 2 cut(s) | 215, 809 |
| BstX2I | RGATCY | 1 cut(s) | 272 |
| BstYI | RGATCY | 1 cut(s) | 272 |
| BstZ17I | GTATAC | 1 cut(s) | 53 |
| Bsu36I | CCTNAGG | 1 cut(s) | 124 |
| BsuRI | GGCC | 2 cut(s) | 386, 742 |
| BtsCI | GGATG | 2 cut(s) | 691, 707 |
| BtsI | GCAGTG | 1 cut(s) | 387 |
| BtsIMutI | CAGTG | 3 cut(s) | 387, 398, 483 |
| BveI | ACCTGC | 1 cut(s) | 429 |
| Cfr13I | GGNCC | 1 cut(s) | 385 |
| Csp6I | GTAC | 2 cut(s) | 661, 746 |
| CviAII | CATG | 3 cut(s) | 236, 394, 589 |
| CviQI | GTAC | 2 cut(s) | 661, 746 |
| DdeI | CTNAG | 3 cut(s) | 64, 124, 347 |
| DpnI | GATC | 1 cut(s) | 274 |
| DpnII | GATC | 1 cut(s) | 272 |
| DraI | TTTAAA | 1 cut(s) | 562 |
| Eam1104I | CTCTTC | 1 cut(s) | 716 |
| EarI | CTCTTC | 1 cut(s) | 716 |
| Eco81I | CCTNAGG | 1 cut(s) | 124 |
| EcoRII | CCWGG | 1 cut(s) | 656 |
| FaeI | CATG | 3 cut(s) | 239, 397, 592 |
| FaqI | GGGAC | 1 cut(s) | 796 |
| FatI | CATG | 3 cut(s) | 235, 393, 588 |
| FauI | CCCGC | 1 cut(s) | 748 |
| FblI | GTMKAC | 1 cut(s) | 52 |
| Fnu4HI | GCNGC | 2 cut(s) | 204, 823 |
| FokI | GGATG | 2 cut(s) | 694, 698 |
| Fsp4HI | GCNGC | 2 cut(s) | 204, 823 |
| FspBI | CTAG | 2 cut(s) | 323, 593 |
| GluI | GCNGC | 2 cut(s) | 204, 823 |
| HaeIII | GGCC | 2 cut(s) | 386, 742 |
| Hin1II | CATG | 3 cut(s) | 239, 397, 592 |
| HincII | GTYRAC | 1 cut(s) | 793 |
| HindII | GTYRAC | 1 cut(s) | 793 |
| HinfI | GANTC | 5 cut(s) | 99, 367, 552, 701, 814 |
| HpaI | GTTAAC | 1 cut(s) | 793 |
| HphI | GGTGA | 4 cut(s) | 148, 443, 696, 788 |
| Hpy166II | GTNNAC | 3 cut(s) | 53, 188, 793 |
| Hpy188I | TCNGA | 4 cut(s) | 147, 213, 636, 819 |
| Hpy188III | TCNNGA | 1 cut(s) | 126 |
| Hpy8I | GTNNAC | 3 cut(s) | 53, 188, 793 |
| HpyAV | CCTTC | 5 cut(s) | 127, 176, 355, 539, 732 |
| HpyCH4III | ACNGT | 3 cut(s) | 402, 797, 857 |
| HpyCH4V | TGCA | 5 cut(s) | 41, 513, 641, 689, 771 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 290 |
| HpyF3I | CTNAG | 3 cut(s) | 64, 124, 347 |
| Hsp92II | CATG | 3 cut(s) | 239, 397, 592 |
| KspAI | GTTAAC | 1 cut(s) | 793 |
| Kzo9I | GATC | 1 cut(s) | 272 |
| LguI | GCTCTTC | 1 cut(s) | 716 |
| LmnI | GCTCC | 2 cut(s) | 9, 232 |
| LpnPI | CCDG | 8 cut(s) | 111, 434, 460, 545, 643, 670, 756, 864 |
| Lsp1109I | GCAGC | 2 cut(s) | 215, 809 |
| LweI | GCATC | 1 cut(s) | 676 |
| MaeI | CTAG | 2 cut(s) | 323, 593 |
| MaeIII | GTNAC | 1 cut(s) | 396 |
| MalI | GATC | 1 cut(s) | 274 |
| MboI | GATC | 1 cut(s) | 272 |
| MboII | GAAGA | 4 cut(s) | 282, 463, 722, 733 |
| MflI | RGATCY | 1 cut(s) | 272 |
| MluCI | AATT | 7 cut(s) | 139, 197, 328, 412, 455, 501, 673 |
| MmeI | TCCRAC | 1 cut(s) | 779 |
| MnlI | CCTC | 5 cut(s) | 18, 70, 133, 446, 603 |
| MseI | TTAA | 5 cut(s) | 177, 228, 561, 762, 792 |
| MspR9I | CCNGG | 1 cut(s) | 658 |
| Mva1269I | GAATGC | 2 cut(s) | 577, 726 |
| MvaI | CCWGG | 1 cut(s) | 658 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 290 |
| NdeII | GATC | 1 cut(s) | 272 |
| NlaIII | CATG | 3 cut(s) | 239, 397, 592 |
| NmuCI | GTSAC | 1 cut(s) | 396 |
| PciSI | GCTCTTC | 1 cut(s) | 716 |
| PctI | GAATGC | 2 cut(s) | 577, 726 |
| PfeI | GAWTC | 5 cut(s) | 99, 367, 552, 701, 814 |
| PkrI | GCNGC | 2 cut(s) | 205, 824 |
| Psp6I | CCWGG | 1 cut(s) | 656 |
| PspGI | CCWGG | 1 cut(s) | 656 |
| PspPI | GGNCC | 1 cut(s) | 385 |
| PsuI | RGATCY | 1 cut(s) | 272 |
| RsaI | GTAC | 2 cut(s) | 662, 747 |
| RsaNI | GTAC | 2 cut(s) | 661, 746 |
| SapI | GCTCTTC | 1 cut(s) | 716 |
| SaqAI | TTAA | 5 cut(s) | 177, 228, 561, 762, 792 |
| SatI | GCNGC | 2 cut(s) | 204, 823 |
| Sau3AI | GATC | 1 cut(s) | 272 |
| Sau96I | GGNCC | 1 cut(s) | 385 |
| ScaI | AGTACT | 1 cut(s) | 747 |
| ScrFI | CCNGG | 1 cut(s) | 658 |
| SfaNI | GCATC | 1 cut(s) | 676 |
| SmlI | CTYRAG | 1 cut(s) | 9 |
| SmoI | CTYRAG | 1 cut(s) | 9 |
| SpeI | ACTAGT | 1 cut(s) | 322 |
| Sse9I | AATT | 7 cut(s) | 139, 197, 328, 412, 455, 501, 673 |
| SsiI | CCGC | 1 cut(s) | 755 |
| SspI | AATATT | 1 cut(s) | 833 |
| SspMI | CTAG | 2 cut(s) | 323, 593 |
| StyD4I | CCNGG | 1 cut(s) | 656 |
| TaaI | ACNGT | 3 cut(s) | 402, 797, 857 |
| TasI | AATT | 7 cut(s) | 139, 197, 328, 412, 455, 501, 673 |
| TatI | WGTACW | 1 cut(s) | 745 |
| TfiI | GAWTC | 5 cut(s) | 99, 367, 552, 701, 814 |
| Tru1I | TTAA | 5 cut(s) | 177, 228, 561, 762, 792 |
| Tru9I | TTAA | 5 cut(s) | 177, 228, 561, 762, 792 |
| TscAI | CASTG | 3 cut(s) | 387, 405, 490 |
| TseFI | GTSAC | 1 cut(s) | 396 |
| TseI | GCWGC | 2 cut(s) | 203, 822 |
| Tsp45I | GTSAC | 1 cut(s) | 396 |
| TspRI | CASTG | 3 cut(s) | 387, 405, 490 |
| XapI | RAATTY | 2 cut(s) | 139, 501 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 714 |
| XmiI | GTMKAC | 1 cut(s) | 52 |
| XspI | CTAG | 2 cut(s) | 323, 593 |
| ZrmI | AGTACT | 1 cut(s) | 747 |