Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 214, 472 |
| AccI | GTMKAC | 1 cut(s) | 512 |
| AciI | CCGC | 1 cut(s) | 470 |
| AclWI | GGATC | 1 cut(s) | 390 |
| AcsI | RAATTY | 2 cut(s) | 59, 538 |
| AfaI | GTAC | 4 cut(s) | 128, 465, 522, 529 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 239 |
| AgsI | TTSAA | 7 cut(s) | 10, 224, 280, 423, 559, 656, 760 |
| AjnI | CCWGG | 2 cut(s) | 523, 706 |
| AluBI | AGCT | 1 cut(s) | 505 |
| AluI | AGCT | 1 cut(s) | 505 |
| Alw21I | GWGCWC | 1 cut(s) | 24 |
| Alw26I | GTCTC | 1 cut(s) | 641 |
| AlwI | GGATC | 1 cut(s) | 390 |
| AoxI | GGCC | 1 cut(s) | 617 |
| ApeKI | GCWGC | 1 cut(s) | 737 |
| ApoI | RAATTY | 2 cut(s) | 59, 538 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 68, 100 |
| AspS9I | GGNCC | 1 cut(s) | 193 |
| AvaII | GGWCC | 1 cut(s) | 193 |
| BaeGI | GKGCMC | 1 cut(s) | 154 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 504, 537 |
| BanI | GGYRCC | 2 cut(s) | 214, 472 |
| Bbv12I | GWGCWC | 1 cut(s) | 24 |
| BbvI | GCAGC | 1 cut(s) | 724 |
| BceAI | ACGGC | 4 cut(s) | 546, 632, 686, 738 |
| BciT130I | CCWGG | 2 cut(s) | 525, 708 |
| BcoDI | GTCTC | 1 cut(s) | 641 |
| BfaI | CTAG | 3 cut(s) | 207, 267, 741 |
| BfmI | CTRYAG | 1 cut(s) | 576 |
| BisI | GCNGC | 1 cut(s) | 738 |
| BlsI | GCNGC | 1 cut(s) | 739 |
| Bme1390I | CCNGG | 2 cut(s) | 525, 708 |
| Bme18I | GGWCC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 193 |
| BmiI | GGNNCC | 4 cut(s) | 195, 216, 474, 603 |
| BmrFI | CCNGG | 2 cut(s) | 525, 708 |
| BmsI | GCATC | 2 cut(s) | 241, 688 |
| BpmI | CTGGAG | 2 cut(s) | 629, 729 |
| BsaJI | CCNNGG | 2 cut(s) | 94, 197 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 239 |
| Bse1I | ACTGG | 1 cut(s) | 233 |
| BseBI | CCWGG | 2 cut(s) | 525, 708 |
| BseDI | CCNNGG | 2 cut(s) | 94, 197 |
| BseGI | GGATG | 1 cut(s) | 703 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 239 |
| BseNI | ACTGG | 1 cut(s) | 233 |
| BseRI | GAGGAG | 2 cut(s) | 467, 470 |
| BseSI | GKGCMC | 1 cut(s) | 154 |
| BseXI | GCAGC | 1 cut(s) | 724 |
| BsgI | GTGCAG | 1 cut(s) | 770 |
| BshFI | GGCC | 1 cut(s) | 619 |
| BshNI | GGYRCC | 2 cut(s) | 214, 472 |
| BsiHKAI | GWGCWC | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 239 |
| BsmAI | GTCTC | 1 cut(s) | 641 |
| BsmI | GAATGC | 1 cut(s) | 304 |
| BsnI | GGCC | 1 cut(s) | 619 |
| Bsp1286I | GDGCHC | 2 cut(s) | 24, 154 |
| Bsp1407I | TGTACA | 1 cut(s) | 126 |
| Bsp143I | GATC | 3 cut(s) | 3, 209, 382 |
| Bsp19I | CCATGG | 1 cut(s) | 197 |
| BspACI | CCGC | 1 cut(s) | 470 |
| BspANI | GGCC | 1 cut(s) | 619 |
| BspLI | GGNNCC | 4 cut(s) | 195, 216, 474, 603 |
| BspPI | GGATC | 1 cut(s) | 390 |
| BspT107I | GGYRCC | 2 cut(s) | 214, 472 |
| BsrGI | TGTACA | 1 cut(s) | 126 |
| BsrI | ACTGG | 1 cut(s) | 233 |
| BssECI | CCNNGG | 2 cut(s) | 94, 197 |
| BssMI | GATC | 3 cut(s) | 3, 209, 382 |
| BssT1I | CCWWGG | 2 cut(s) | 94, 197 |
| Bst2UI | CCWGG | 2 cut(s) | 525, 708 |
| Bst6I | CTCTTC | 1 cut(s) | 639 |
| BstAUI | TGTACA | 1 cut(s) | 126 |
| BstDSI | CCRYGG | 1 cut(s) | 197 |
| BstF5I | GGATG | 1 cut(s) | 703 |
| BstKTI | GATC | 3 cut(s) | 6, 212, 385 |
| BstMAI | GTCTC | 1 cut(s) | 641 |
| BstMBI | GATC | 3 cut(s) | 3, 209, 382 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 722 |
| BstNI | CCWGG | 2 cut(s) | 525, 708 |
| BstNSI | RCATGY | 1 cut(s) | 133 |
| BstSCI | CCNGG | 2 cut(s) | 523, 706 |
| BstSFI | CTRYAG | 1 cut(s) | 576 |
| BstSLI | GKGCMC | 1 cut(s) | 154 |
| BstV1I | GCAGC | 1 cut(s) | 724 |
| BsuRI | GGCC | 1 cut(s) | 619 |
| BtgI | CCRYGG | 1 cut(s) | 197 |
| BtsCI | GGATG | 1 cut(s) | 703 |
| BtsIMutI | CAGTG | 1 cut(s) | 551 |
| Cfr13I | GGNCC | 1 cut(s) | 193 |
| CsiI | ACCWGGT | 1 cut(s) | 523 |
| Csp6I | GTAC | 4 cut(s) | 127, 464, 521, 528 |
| CviAII | CATG | 3 cut(s) | 130, 198, 326 |
| CviQI | GTAC | 4 cut(s) | 127, 464, 521, 528 |
| DpnI | GATC | 3 cut(s) | 5, 211, 384 |
| DpnII | GATC | 3 cut(s) | 3, 209, 382 |
| Eam1104I | CTCTTC | 1 cut(s) | 639 |
| EarI | CTCTTC | 1 cut(s) | 639 |
| Eco130I | CCWWGG | 2 cut(s) | 94, 197 |
| Eco32I | GATATC | 2 cut(s) | 181, 337 |
| Eco47I | GGWCC | 1 cut(s) | 193 |
| EcoRII | CCWGG | 2 cut(s) | 523, 706 |
| EcoRV | GATATC | 2 cut(s) | 181, 337 |
| EcoT14I | CCWWGG | 2 cut(s) | 94, 197 |
| ErhI | CCWWGG | 2 cut(s) | 94, 197 |
| FaeI | CATG | 3 cut(s) | 133, 201, 329 |
| FatI | CATG | 3 cut(s) | 129, 197, 325 |
| FblI | GTMKAC | 1 cut(s) | 512 |
| Fnu4HI | GCNGC | 1 cut(s) | 738 |
| FokI | GGATG | 1 cut(s) | 710 |
| Fsp4HI | GCNGC | 1 cut(s) | 738 |
| FspBI | CTAG | 3 cut(s) | 207, 267, 741 |
| GluI | GCNGC | 1 cut(s) | 738 |
| GsuI | CTGGAG | 2 cut(s) | 629, 729 |
| HaeIII | GGCC | 1 cut(s) | 619 |
| Hin1II | CATG | 3 cut(s) | 133, 201, 329 |
| HinfI | GANTC | 1 cut(s) | 404 |
| Hpy166II | GTNNAC | 2 cut(s) | 513, 569 |
| Hpy188I | TCNGA | 2 cut(s) | 121, 193 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 608 |
| Hpy8I | GTNNAC | 2 cut(s) | 513, 569 |
| HpyAV | CCTTC | 5 cut(s) | 93, 97, 256, 366, 544 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 3 cut(s) | 302, 481, 751 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 722 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Hsp92II | CATG | 3 cut(s) | 133, 201, 329 |
| Kzo9I | GATC | 3 cut(s) | 3, 209, 382 |
| Lsp1109I | GCAGC | 1 cut(s) | 724 |
| LweI | GCATC | 2 cut(s) | 241, 688 |
| MabI | ACCWGGT | 1 cut(s) | 523 |
| MaeI | CTAG | 3 cut(s) | 207, 267, 741 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MaeIII | GTNAC | 1 cut(s) | 74 |
| MalI | GATC | 3 cut(s) | 5, 211, 384 |
| MboI | GATC | 3 cut(s) | 3, 209, 382 |
| MboII | GAAGA | 1 cut(s) | 656 |
| MfeI | CAATTG | 2 cut(s) | 562, 651 |
| MhlI | GDGCHC | 2 cut(s) | 24, 154 |
| MluCI | AATT | 7 cut(s) | 59, 224, 305, 423, 538, 562, 651 |
| MmeI | TCCRAC | 1 cut(s) | 675 |
| MnlI | CCTC | 9 cut(s) | 31, 100, 236, 280, 445, 448, 615, 634, 678 |
| MseI | TTAA | 5 cut(s) | 137, 378, 426, 446, 591 |
| MslI | CAYNNNNRTG | 1 cut(s) | 330 |
| MspR9I | CCNGG | 2 cut(s) | 525, 708 |
| MunI | CAATTG | 2 cut(s) | 562, 651 |
| Mva1269I | GAATGC | 1 cut(s) | 304 |
| MvaI | CCWGG | 2 cut(s) | 525, 708 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 722 |
| NcoI | CCATGG | 1 cut(s) | 197 |
| NdeII | GATC | 3 cut(s) | 3, 209, 382 |
| NlaIII | CATG | 3 cut(s) | 133, 201, 329 |
| NlaIV | GGNNCC | 4 cut(s) | 195, 216, 474, 603 |
| NmuCI | GTSAC | 1 cut(s) | 74 |
| NspI | RCATGY | 1 cut(s) | 133 |
| PctI | GAATGC | 1 cut(s) | 304 |
| PfeI | GAWTC | 1 cut(s) | 404 |
| PkrI | GCNGC | 1 cut(s) | 739 |
| Psp6I | CCWGG | 2 cut(s) | 523, 706 |
| PspGI | CCWGG | 2 cut(s) | 523, 706 |
| PspN4I | GGNNCC | 4 cut(s) | 195, 216, 474, 603 |
| PspPI | GGNCC | 1 cut(s) | 193 |
| RsaI | GTAC | 4 cut(s) | 128, 465, 522, 529 |
| RsaNI | GTAC | 4 cut(s) | 127, 464, 521, 528 |
| RseI | CAYNNNNRTG | 1 cut(s) | 330 |
| SaqAI | TTAA | 5 cut(s) | 137, 378, 426, 446, 591 |
| SatI | GCNGC | 1 cut(s) | 738 |
| Sau3AI | GATC | 3 cut(s) | 3, 209, 382 |
| Sau96I | GGNCC | 1 cut(s) | 193 |
| ScrFI | CCNGG | 2 cut(s) | 525, 708 |
| SduI | GDGCHC | 2 cut(s) | 24, 154 |
| SexAI | ACCWGGT | 1 cut(s) | 523 |
| SfaNI | GCATC | 2 cut(s) | 241, 688 |
| SfcI | CTRYAG | 1 cut(s) | 576 |
| SinI | GGWCC | 1 cut(s) | 193 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 330 |
| Sse9I | AATT | 7 cut(s) | 59, 224, 305, 423, 538, 562, 651 |
| SsiI | CCGC | 1 cut(s) | 470 |
| SspMI | CTAG | 3 cut(s) | 207, 267, 741 |
| StyD4I | CCNGG | 2 cut(s) | 523, 706 |
| StyI | CCWWGG | 2 cut(s) | 94, 197 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 7 cut(s) | 59, 224, 305, 423, 538, 562, 651 |
| TatI | WGTACW | 2 cut(s) | 126, 463 |
| TfiI | GAWTC | 1 cut(s) | 404 |
| Tru1I | TTAA | 5 cut(s) | 137, 378, 426, 446, 591 |
| Tru9I | TTAA | 5 cut(s) | 137, 378, 426, 446, 591 |
| TscAI | CASTG | 1 cut(s) | 551 |
| TseFI | GTSAC | 1 cut(s) | 74 |
| TseI | GCWGC | 1 cut(s) | 737 |
| Tsp45I | GTSAC | 1 cut(s) | 74 |
| TspDTI | ATGAA | 2 cut(s) | 52, 62 |
| TspGWI | ACGGA | 1 cut(s) | 733 |
| TspRI | CASTG | 1 cut(s) | 551 |
| VpaK11BI | GGWCC | 1 cut(s) | 193 |
| XapI | RAATTY | 2 cut(s) | 59, 538 |
| XceI | RCATGY | 1 cut(s) | 133 |
| XmiI | GTMKAC | 1 cut(s) | 512 |
| XspI | CTAG | 3 cut(s) | 207, 267, 741 |