Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 20 |
| Acc36I | ACCTGC | 1 cut(s) | 20 |
| AccB1I | GGYRCC | 1 cut(s) | 836 |
| AclWI | GGATC | 2 cut(s) | 60, 293 |
| AcsI | RAATTY | 1 cut(s) | 656 |
| AfaI | GTAC | 3 cut(s) | 200, 683, 712 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 308 |
| AflII | CTTAAG | 2 cut(s) | 488, 648 |
| AflIII | ACRYGT | 1 cut(s) | 322 |
| AgsI | TTSAA | 1 cut(s) | 830 |
| AjnI | CCWGG | 3 cut(s) | 302, 482, 832 |
| AluBI | AGCT | 3 cut(s) | 209, 525, 575 |
| AluI | AGCT | 3 cut(s) | 209, 525, 575 |
| Alw21I | GWGCWC | 1 cut(s) | 122 |
| Alw26I | GTCTC | 2 cut(s) | 251, 412 |
| AlwI | GGATC | 2 cut(s) | 60, 293 |
| ApeKI | GCWGC | 1 cut(s) | 804 |
| ApoI | RAATTY | 1 cut(s) | 656 |
| AseI | ATTAAT | 1 cut(s) | 217 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 427 |
| AsuC2I | CCSGG | 1 cut(s) | 151 |
| AsuHPI | GGTGA | 4 cut(s) | 32, 250, 323, 509 |
| AsuII | TTCGAA | 1 cut(s) | 368 |
| BanI | GGYRCC | 1 cut(s) | 836 |
| Bbv12I | GWGCWC | 1 cut(s) | 122 |
| BbvI | GCAGC | 1 cut(s) | 791 |
| BccI | CCATC | 6 cut(s) | 19, 33, 108, 387, 408, 657 |
| BciT130I | CCWGG | 3 cut(s) | 304, 484, 834 |
| BcnI | CCSGG | 1 cut(s) | 151 |
| BcoDI | GTCTC | 2 cut(s) | 251, 412 |
| BfaI | CTAG | 2 cut(s) | 79, 508 |
| BfmI | CTRYAG | 1 cut(s) | 721 |
| BfrI | CTTAAG | 2 cut(s) | 488, 648 |
| BfuAI | ACCTGC | 1 cut(s) | 20 |
| BisI | GCNGC | 1 cut(s) | 805 |
| BlsI | GCNGC | 1 cut(s) | 806 |
| BmcAI | AGTACT | 1 cut(s) | 683 |
| Bme1390I | CCNGG | 4 cut(s) | 151, 304, 484, 834 |
| BmiI | GGNNCC | 2 cut(s) | 481, 838 |
| BmrFI | CCNGG | 4 cut(s) | 151, 304, 484, 834 |
| BmsI | GCATC | 1 cut(s) | 544 |
| Bpu14I | TTCGAA | 1 cut(s) | 368 |
| BpuMI | CCSGG | 1 cut(s) | 151 |
| BsaAI | YACGTR | 1 cut(s) | 714 |
| BsaJI | CCNNGG | 3 cut(s) | 69, 149, 302 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 101, 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 308 |
| Bse1I | ACTGG | 1 cut(s) | 555 |
| Bse3DI | GCAATG | 1 cut(s) | 416 |
| BseBI | CCWGG | 3 cut(s) | 304, 484, 834 |
| BseDI | CCNNGG | 3 cut(s) | 69, 149, 302 |
| BseGI | GGATG | 4 cut(s) | 68, 119, 559, 668 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BseMI | GCAATG | 1 cut(s) | 416 |
| BseMII | CTCAG | 2 cut(s) | 286, 562 |
| BseNI | ACTGG | 1 cut(s) | 555 |
| BseXI | GCAGC | 1 cut(s) | 791 |
| BseYI | CCCAGC | 1 cut(s) | 795 |
| BshNI | GGYRCC | 1 cut(s) | 836 |
| BsiHKAI | GWGCWC | 1 cut(s) | 122 |
| BsiSI | CCGG | 1 cut(s) | 151 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BsmAI | GTCTC | 2 cut(s) | 251, 412 |
| BsmBI | CGTCTC | 1 cut(s) | 412 |
| BsmI | GAATGC | 1 cut(s) | 296 |
| Bsp119I | TTCGAA | 1 cut(s) | 368 |
| Bsp1286I | GDGCHC | 1 cut(s) | 122 |
| Bsp143I | GATC | 3 cut(s) | 65, 298, 499 |
| BspCNI | CTCAG | 2 cut(s) | 287, 563 |
| BspLI | GGNNCC | 2 cut(s) | 481, 838 |
| BspMI | ACCTGC | 1 cut(s) | 20 |
| BspPI | GGATC | 2 cut(s) | 60, 293 |
| BspT104I | TTCGAA | 1 cut(s) | 368 |
| BspT107I | GGYRCC | 1 cut(s) | 836 |
| BspTI | CTTAAG | 2 cut(s) | 488, 648 |
| BsrDI | GCAATG | 1 cut(s) | 416 |
| BsrI | ACTGG | 1 cut(s) | 555 |
| BssECI | CCNNGG | 3 cut(s) | 69, 149, 302 |
| BssMI | GATC | 3 cut(s) | 65, 298, 499 |
| BssT1I | CCWWGG | 1 cut(s) | 69 |
| Bst2UI | CCWGG | 3 cut(s) | 304, 484, 834 |
| BstAFI | CTTAAG | 2 cut(s) | 488, 648 |
| BstBAI | YACGTR | 1 cut(s) | 714 |
| BstBI | TTCGAA | 1 cut(s) | 368 |
| BstC8I | GCNNGC | 1 cut(s) | 211 |
| BstDEI | CTNAG | 3 cut(s) | 9, 295, 571 |
| BstF5I | GGATG | 4 cut(s) | 68, 119, 559, 668 |
| BstKTI | GATC | 3 cut(s) | 68, 301, 502 |
| BstMAI | GTCTC | 2 cut(s) | 251, 412 |
| BstMBI | GATC | 3 cut(s) | 65, 298, 499 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 801, 810 |
| BstNI | CCWGG | 3 cut(s) | 304, 484, 834 |
| BstNSI | RCATGY | 2 cut(s) | 326, 811 |
| BstSCI | CCNGG | 4 cut(s) | 149, 302, 482, 832 |
| BstSFI | CTRYAG | 1 cut(s) | 721 |
| BstV1I | GCAGC | 1 cut(s) | 791 |
| BstX2I | RGATCY | 1 cut(s) | 298 |
| BstYI | RGATCY | 1 cut(s) | 298 |
| BtsCI | GGATG | 4 cut(s) | 68, 119, 559, 668 |
| BtsIMutI | CAGTG | 2 cut(s) | 10, 548 |
| BveI | ACCTGC | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 1 cut(s) | 211 |
| CseI | GACGC | 1 cut(s) | 180 |
| Csp6I | GTAC | 3 cut(s) | 199, 682, 711 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 615, 650 |
| CviAII | CATG | 5 cut(s) | 228, 323, 435, 689, 808 |
| CviQI | GTAC | 3 cut(s) | 199, 682, 711 |
| DdeI | CTNAG | 3 cut(s) | 9, 295, 571 |
| DpnI | GATC | 3 cut(s) | 67, 300, 501 |
| DpnII | GATC | 3 cut(s) | 65, 298, 499 |
| Eco130I | CCWWGG | 1 cut(s) | 69 |
| Eco32I | GATATC | 1 cut(s) | 236 |
| EcoRII | CCWGG | 3 cut(s) | 302, 482, 832 |
| EcoRV | GATATC | 1 cut(s) | 236 |
| EcoT14I | CCWWGG | 1 cut(s) | 69 |
| ErhI | CCWWGG | 1 cut(s) | 69 |
| Esp3I | CGTCTC | 1 cut(s) | 412 |
| FaeI | CATG | 5 cut(s) | 231, 326, 438, 692, 811 |
| FatI | CATG | 5 cut(s) | 227, 322, 434, 688, 807 |
| Fnu4HI | GCNGC | 1 cut(s) | 805 |
| FokI | GGATG | 4 cut(s) | 75, 126, 566, 675 |
| Fsp4HI | GCNGC | 1 cut(s) | 805 |
| FspBI | CTAG | 2 cut(s) | 79, 508 |
| GluI | GCNGC | 1 cut(s) | 805 |
| GsaI | CCCAGC | 1 cut(s) | 799 |
| HapII | CCGG | 1 cut(s) | 151 |
| HgaI | GACGC | 1 cut(s) | 180 |
| Hin1II | CATG | 5 cut(s) | 231, 326, 438, 692, 811 |
| HindIII | AAGCTT | 2 cut(s) | 207, 523 |
| HinfI | GANTC | 3 cut(s) | 423, 623, 717 |
| HpaII | CCGG | 1 cut(s) | 151 |
| HphI | GGTGA | 4 cut(s) | 32, 250, 323, 509 |
| Hpy166II | GTNNAC | 2 cut(s) | 269, 320 |
| Hpy188I | TCNGA | 3 cut(s) | 96, 124, 572 |
| Hpy8I | GTNNAC | 2 cut(s) | 269, 320 |
| HpyAV | CCTTC | 4 cut(s) | 250, 265, 308, 323 |
| HpyCH4IV | ACGT | 1 cut(s) | 713 |
| HpyCH4V | TGCA | 5 cut(s) | 385, 409, 461, 557, 807 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 801, 810 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 295, 571 |
| HpySE526I | ACGT | 1 cut(s) | 713 |
| Hsp92II | CATG | 5 cut(s) | 231, 326, 438, 692, 811 |
| Kzo9I | GATC | 3 cut(s) | 65, 298, 499 |
| LmnI | GCTCC | 2 cut(s) | 125, 666 |
| Lsp1109I | GCAGC | 1 cut(s) | 791 |
| LweI | GCATC | 1 cut(s) | 544 |
| MaeI | CTAG | 2 cut(s) | 79, 508 |
| MaeII | ACGT | 1 cut(s) | 713 |
| MaeIII | GTNAC | 1 cut(s) | 142 |
| MalI | GATC | 3 cut(s) | 67, 300, 501 |
| MboI | GATC | 3 cut(s) | 65, 298, 499 |
| MboII | GAAGA | 2 cut(s) | 339, 559 |
| MflI | RGATCY | 1 cut(s) | 298 |
| MhlI | GDGCHC | 1 cut(s) | 122 |
| MluCI | AATT | 4 cut(s) | 86, 138, 218, 656 |
| MmeI | TCCRAC | 4 cut(s) | 119, 147, 274, 514 |
| MnlI | CCTC | 6 cut(s) | 103, 370, 613, 687, 779, 793 |
| MroXI | GAANNNNTTC | 1 cut(s) | 427 |
| MseI | TTAA | 5 cut(s) | 217, 471, 489, 649, 851 |
| MspCI | CTTAAG | 2 cut(s) | 488, 648 |
| MspI | CCGG | 1 cut(s) | 151 |
| MspR9I | CCNGG | 4 cut(s) | 151, 304, 484, 834 |
| Mva1269I | GAATGC | 1 cut(s) | 296 |
| MvaI | CCWGG | 3 cut(s) | 304, 484, 834 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 801, 810 |
| NciI | CCSGG | 1 cut(s) | 151 |
| NdeII | GATC | 3 cut(s) | 65, 298, 499 |
| NlaIII | CATG | 5 cut(s) | 231, 326, 438, 692, 811 |
| NlaIV | GGNNCC | 2 cut(s) | 481, 838 |
| NspI | RCATGY | 2 cut(s) | 326, 811 |
| NspV | TTCGAA | 1 cut(s) | 368 |
| PaqCI | CACCTGC | 1 cut(s) | 20 |
| PciI | ACATGT | 1 cut(s) | 322 |
| PctI | GAATGC | 1 cut(s) | 296 |
| PdmI | GAANNNNTTC | 1 cut(s) | 427 |
| PfeI | GAWTC | 3 cut(s) | 423, 623, 717 |
| PkrI | GCNGC | 1 cut(s) | 806 |
| Ppu21I | YACGTR | 1 cut(s) | 714 |
| PscI | ACATGT | 1 cut(s) | 322 |
| PshBI | ATTAAT | 1 cut(s) | 217 |
| Psp6I | CCWGG | 3 cut(s) | 302, 482, 832 |
| PspFI | CCCAGC | 1 cut(s) | 795 |
| PspGI | CCWGG | 3 cut(s) | 302, 482, 832 |
| PspN4I | GGNNCC | 2 cut(s) | 481, 838 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 434, 466 |
| PsuI | RGATCY | 1 cut(s) | 298 |
| RsaI | GTAC | 3 cut(s) | 200, 683, 712 |
| RsaNI | GTAC | 3 cut(s) | 199, 682, 711 |
| SaqAI | TTAA | 5 cut(s) | 217, 471, 489, 649, 851 |
| SatI | GCNGC | 1 cut(s) | 805 |
| Sau3AI | GATC | 3 cut(s) | 65, 298, 499 |
| ScaI | AGTACT | 1 cut(s) | 683 |
| ScrFI | CCNGG | 4 cut(s) | 151, 304, 484, 834 |
| SduI | GDGCHC | 1 cut(s) | 122 |
| SfaNI | GCATC | 1 cut(s) | 544 |
| SfcI | CTRYAG | 1 cut(s) | 721 |
| SfuI | TTCGAA | 1 cut(s) | 368 |
| SmlI | CTYRAG | 2 cut(s) | 488, 648 |
| SmoI | CTYRAG | 2 cut(s) | 488, 648 |
| Sse9I | AATT | 4 cut(s) | 86, 138, 218, 656 |
| SspMI | CTAG | 2 cut(s) | 79, 508 |
| StyD4I | CCNGG | 4 cut(s) | 149, 302, 482, 832 |
| StyI | CCWWGG | 1 cut(s) | 69 |
| TaiI | ACGT | 1 cut(s) | 716 |
| TaqI | TCGA | 2 cut(s) | 368, 528 |
| TasI | AATT | 4 cut(s) | 86, 138, 218, 656 |
| TatI | WGTACW | 1 cut(s) | 681 |
| TfiI | GAWTC | 3 cut(s) | 423, 623, 717 |
| Tru1I | TTAA | 5 cut(s) | 217, 471, 489, 649, 851 |
| Tru9I | TTAA | 5 cut(s) | 217, 471, 489, 649, 851 |
| TscAI | CASTG | 1 cut(s) | 555 |
| TseI | GCWGC | 1 cut(s) | 804 |
| TspDTI | ATGAA | 5 cut(s) | 42, 92, 216, 420, 748 |
| TspGWI | ACGGA | 1 cut(s) | 296 |
| TspRI | CASTG | 1 cut(s) | 555 |
| Vha464I | CTTAAG | 2 cut(s) | 488, 648 |
| VspI | ATTAAT | 1 cut(s) | 217 |
| XapI | RAATTY | 1 cut(s) | 656 |
| XceI | RCATGY | 2 cut(s) | 326, 811 |
| XmnI | GAANNNNTTC | 1 cut(s) | 427 |
| XspI | CTAG | 2 cut(s) | 79, 508 |
| ZrmI | AGTACT | 1 cut(s) | 683 |