Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 52 - 116 | 1.9e-09 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 15 |
| AccB1I | GGYRCC | 1 cut(s) | 34 |
| AciI | CCGC | 2 cut(s) | 32, 195 |
| AcuI | CTGAAG | 1 cut(s) | 303 |
| AcyI | GRCGYC | 1 cut(s) | 96 |
| AfaI | GTAC | 3 cut(s) | 27, 77, 365 |
| AgsI | TTSAA | 3 cut(s) | 302, 342, 421 |
| AjnI | CCWGG | 2 cut(s) | 107, 412 |
| AleI | CACNNNNGTG | 1 cut(s) | 110 |
| AluBI | AGCT | 3 cut(s) | 103, 223, 266 |
| AluI | AGCT | 3 cut(s) | 103, 223, 266 |
| AoxI | GGCC | 1 cut(s) | 162 |
| ApeKI | GCWGC | 1 cut(s) | 251 |
| AspLEI | GCGC | 1 cut(s) | 16 |
| AspS9I | GGNCC | 1 cut(s) | 400 |
| AsuC2I | CCSGG | 1 cut(s) | 176 |
| AsuHPI | GGTGA | 3 cut(s) | 97, 170, 281 |
| AvaII | GGWCC | 1 cut(s) | 400 |
| BanI | GGYRCC | 1 cut(s) | 34 |
| BanII | GRGCYC | 1 cut(s) | 372 |
| BbvI | GCAGC | 1 cut(s) | 238 |
| BccI | CCATC | 1 cut(s) | 284 |
| BciT130I | CCWGG | 2 cut(s) | 109, 414 |
| BcnI | CCSGG | 1 cut(s) | 176 |
| BfmI | CTRYAG | 1 cut(s) | 406 |
| BisI | GCNGC | 3 cut(s) | 33, 195, 252 |
| BlsI | GCNGC | 3 cut(s) | 34, 196, 253 |
| Bme1390I | CCNGG | 3 cut(s) | 109, 176, 414 |
| Bme18I | GGWCC | 1 cut(s) | 400 |
| BmgT120I | GGNCC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 2 cut(s) | 36, 401 |
| BmrFI | CCNGG | 3 cut(s) | 109, 176, 414 |
| BmsI | GCATC | 1 cut(s) | 309 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 218, 250, 263, 295 |
| BpmI | CTGGAG | 1 cut(s) | 245 |
| Bpu10I | CCTNAGC | 1 cut(s) | 47 |
| BpuMI | CCSGG | 1 cut(s) | 176 |
| BsaHI | GRCGYC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 2 cut(s) | 108, 436 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 27, 57 |
| BseBI | CCWGG | 2 cut(s) | 109, 414 |
| BseDI | CCNNGG | 2 cut(s) | 108, 436 |
| BseXI | GCAGC | 1 cut(s) | 238 |
| Bsh1285I | CGRYCG | 1 cut(s) | 388 |
| BshFI | GGCC | 1 cut(s) | 164 |
| BshNI | GGYRCC | 1 cut(s) | 34 |
| BsiEI | CGRYCG | 1 cut(s) | 388 |
| BsiSI | CCGG | 1 cut(s) | 175 |
| BsnI | GGCC | 1 cut(s) | 164 |
| Bsp1286I | GDGCHC | 1 cut(s) | 372 |
| BspACI | CCGC | 2 cut(s) | 32, 195 |
| BspANI | GGCC | 1 cut(s) | 164 |
| BspLI | GGNNCC | 2 cut(s) | 36, 401 |
| BspMAI | CTGCAG | 1 cut(s) | 410 |
| BspT107I | GGYRCC | 1 cut(s) | 34 |
| BssECI | CCNNGG | 2 cut(s) | 108, 436 |
| BssNI | GRCGYC | 1 cut(s) | 96 |
| BssT1I | CCWWGG | 1 cut(s) | 436 |
| Bst2UI | CCWGG | 2 cut(s) | 109, 414 |
| BstACI | GRCGYC | 1 cut(s) | 96 |
| BstDEI | CTNAG | 2 cut(s) | 47, 395 |
| BstHHI | GCGC | 1 cut(s) | 16 |
| BstMCI | CGRYCG | 1 cut(s) | 388 |
| BstNI | CCWGG | 2 cut(s) | 109, 414 |
| BstNSI | RCATGY | 1 cut(s) | 20 |
| BstSCI | CCNGG | 3 cut(s) | 107, 174, 412 |
| BstSFI | CTRYAG | 1 cut(s) | 406 |
| BstV1I | GCAGC | 1 cut(s) | 238 |
| BsuRI | GGCC | 1 cut(s) | 164 |
| CfoI | GCGC | 1 cut(s) | 16 |
| Cfr13I | GGNCC | 1 cut(s) | 400 |
| CseI | GACGC | 1 cut(s) | 104 |
| Csp6I | GTAC | 3 cut(s) | 26, 76, 364 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 106, 141 |
| CviAII | CATG | 2 cut(s) | 17, 155 |
| CviJI | RGCY | 6 cut(s) | 103, 164, 194, 223, 266, 370 |
| CviKI_1 | RGCY | 6 cut(s) | 103, 164, 194, 223, 266, 370 |
| CviQI | GTAC | 3 cut(s) | 26, 76, 364 |
| DdeI | CTNAG | 2 cut(s) | 47, 395 |
| Eco130I | CCWWGG | 1 cut(s) | 436 |
| Eco24I | GRGCYC | 1 cut(s) | 372 |
| Eco47I | GGWCC | 1 cut(s) | 400 |
| Eco57I | CTGAAG | 1 cut(s) | 303 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| EcoRII | CCWGG | 2 cut(s) | 107, 412 |
| EcoT14I | CCWWGG | 1 cut(s) | 436 |
| EcoT38I | GRGCYC | 1 cut(s) | 372 |
| ErhI | CCWWGG | 1 cut(s) | 436 |
| FaeI | CATG | 2 cut(s) | 20, 158 |
| FaiI | YATR | 4 cut(s) | 18, 53, 137, 156 |
| FatI | CATG | 2 cut(s) | 16, 154 |
| Fnu4HI | GCNGC | 3 cut(s) | 33, 195, 252 |
| FriOI | GRGCYC | 1 cut(s) | 372 |
| Fsp4HI | GCNGC | 3 cut(s) | 33, 195, 252 |
| FspI | TGCGCA | 1 cut(s) | 15 |
| GlaI | GCGC | 1 cut(s) | 15 |
| GluI | GCNGC | 3 cut(s) | 33, 195, 252 |
| GsuI | CTGGAG | 1 cut(s) | 245 |
| HaeIII | GGCC | 1 cut(s) | 164 |
| HapII | CCGG | 1 cut(s) | 175 |
| HgaI | GACGC | 1 cut(s) | 104 |
| HhaI | GCGC | 1 cut(s) | 16 |
| Hin1I | GRCGYC | 1 cut(s) | 96 |
| Hin1II | CATG | 2 cut(s) | 20, 158 |
| Hin6I | GCGC | 1 cut(s) | 14 |
| HinP1I | GCGC | 1 cut(s) | 14 |
| HinfI | GANTC | 3 cut(s) | 233, 272, 348 |
| HpaII | CCGG | 1 cut(s) | 175 |
| HphI | GGTGA | 3 cut(s) | 97, 170, 281 |
| Hpy166II | GTNNAC | 1 cut(s) | 364 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| Hpy8I | GTNNAC | 1 cut(s) | 364 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyAV | CCTTC | 2 cut(s) | 48, 173 |
| HpyCH4IV | ACGT | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 2 cut(s) | 322, 408 |
| HpyF3I | CTNAG | 2 cut(s) | 47, 395 |
| HpySE526I | ACGT | 1 cut(s) | 74 |
| Hsp92I | GRCGYC | 1 cut(s) | 96 |
| Hsp92II | CATG | 2 cut(s) | 20, 158 |
| HspAI | GCGC | 1 cut(s) | 14 |
| LpnPI | CCDG | 7 cut(s) | 94, 121, 188, 209, 252, 399, 426 |
| Lsp1109I | GCAGC | 1 cut(s) | 238 |
| LweI | GCATC | 1 cut(s) | 309 |
| MaeII | ACGT | 1 cut(s) | 74 |
| MaeIII | GTNAC | 1 cut(s) | 230 |
| MboII | GAAGA | 1 cut(s) | 314 |
| MhlI | GDGCHC | 1 cut(s) | 372 |
| MluCI | AATT | 2 cut(s) | 216, 342 |
| MlyI | GAGTC | 3 cut(s) | 227, 281, 342 |
| MmeI | TCCRAC | 1 cut(s) | 188 |
| MnlI | CCTC | 6 cut(s) | 53, 150, 154, 204, 413, 440 |
| MslI | CAYNNNNRTG | 2 cut(s) | 21, 110 |
| MspI | CCGG | 1 cut(s) | 175 |
| MspR9I | CCNGG | 3 cut(s) | 109, 176, 414 |
| MvaI | CCWGG | 2 cut(s) | 109, 414 |
| NciI | CCSGG | 1 cut(s) | 176 |
| NlaIII | CATG | 2 cut(s) | 20, 158 |
| NlaIV | GGNNCC | 2 cut(s) | 36, 401 |
| NmuCI | GTSAC | 1 cut(s) | 230 |
| NsbI | TGCGCA | 1 cut(s) | 15 |
| NspI | RCATGY | 1 cut(s) | 20 |
| OliI | CACNNNNGTG | 1 cut(s) | 110 |
| PkrI | GCNGC | 3 cut(s) | 34, 196, 253 |
| PleI | GAGTC | 3 cut(s) | 227, 280, 342 |
| PpsI | GAGTC | 3 cut(s) | 227, 280, 342 |
| PpuMI | RGGWCCY | 1 cut(s) | 400 |
| Psp5II | RGGWCCY | 1 cut(s) | 400 |
| Psp6I | CCWGG | 2 cut(s) | 107, 412 |
| PspGI | CCWGG | 2 cut(s) | 107, 412 |
| PspN4I | GGNNCC | 2 cut(s) | 36, 401 |
| PspPI | GGNCC | 1 cut(s) | 400 |
| PspPPI | RGGWCCY | 1 cut(s) | 400 |
| PstI | CTGCAG | 1 cut(s) | 410 |
| RsaI | GTAC | 3 cut(s) | 27, 77, 365 |
| RsaNI | GTAC | 3 cut(s) | 26, 76, 364 |
| RseI | CAYNNNNRTG | 2 cut(s) | 21, 110 |
| SatI | GCNGC | 3 cut(s) | 33, 195, 252 |
| Sau96I | GGNCC | 1 cut(s) | 400 |
| SchI | GAGTC | 3 cut(s) | 227, 281, 342 |
| ScrFI | CCNGG | 3 cut(s) | 109, 176, 414 |
| SduI | GDGCHC | 1 cut(s) | 372 |
| SetI | ASST | 9 cut(s) | 40, 77, 105, 142, 208, 225, 268, 415, 432 |
| SfaNI | GCATC | 1 cut(s) | 309 |
| SfcI | CTRYAG | 1 cut(s) | 406 |
| SinI | GGWCC | 1 cut(s) | 400 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 21, 110 |
| Sse9I | AATT | 2 cut(s) | 216, 342 |
| SsiI | CCGC | 2 cut(s) | 32, 195 |
| StyD4I | CCNGG | 3 cut(s) | 107, 174, 412 |
| StyI | CCWWGG | 1 cut(s) | 436 |
| TaiI | ACGT | 1 cut(s) | 77 |
| TaqI | TCGA | 3 cut(s) | 93, 346, 384 |
| TaqII | GACCGA | 1 cut(s) | 402 |
| TasI | AATT | 2 cut(s) | 216, 342 |
| TauI | GCSGC | 2 cut(s) | 35, 197 |
| TseFI | GTSAC | 1 cut(s) | 230 |
| TseI | GCWGC | 1 cut(s) | 251 |
| Tsp45I | GTSAC | 1 cut(s) | 230 |
| VpaK11BI | GGWCC | 1 cut(s) | 400 |
| XceI | RCATGY | 1 cut(s) | 20 |