ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 188, 191 |
| AfaI | GTAC | 1 cut(s) | 316 |
| AflII | CTTAAG | 1 cut(s) | 268 |
| AgsI | TTSAA | 1 cut(s) | 176 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 259 |
| AjiI | CACGTC | 1 cut(s) | 74 |
| AluBI | AGCT | 1 cut(s) | 65 |
| AluI | AGCT | 1 cut(s) | 65 |
| AoxI | GGCC | 3 cut(s) | 130, 296, 303 |
| ApeKI | GCWGC | 1 cut(s) | 62 |
| AspS9I | GGNCC | 2 cut(s) | 297, 304 |
| BbsI | GAAGAC | 1 cut(s) | 228 |
| BbvI | GCAGC | 1 cut(s) | 74 |
| BclI | TGATCA | 1 cut(s) | 159 |
| BfrI | CTTAAG | 1 cut(s) | 268 |
| BisI | GCNGC | 2 cut(s) | 63, 189 |
| BlsI | GCNGC | 2 cut(s) | 64, 190 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 259 |
| BmgBI | CACGTC | 1 cut(s) | 74 |
| BmgT120I | GGNCC | 2 cut(s) | 297, 304 |
| BpiI | GAAGAC | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 2 cut(s) | 151, 300 |
| Bse1I | ACTGG | 1 cut(s) | 117 |
| Bse3DI | GCAATG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 2 cut(s) | 151, 300 |
| BseMI | GCAATG | 1 cut(s) | 126 |
| BseNI | ACTGG | 1 cut(s) | 117 |
| BseXI | GCAGC | 1 cut(s) | 74 |
| BshFI | GGCC | 3 cut(s) | 132, 298, 305 |
| BslFI | GGGAC | 1 cut(s) | 311 |
| BsmFI | GGGAC | 1 cut(s) | 311 |
| BsnI | GGCC | 3 cut(s) | 132, 298, 305 |
| Bsp1407I | TGTACA | 1 cut(s) | 314 |
| Bsp143I | GATC | 1 cut(s) | 159 |
| BspACI | CCGC | 2 cut(s) | 188, 191 |
| BspANI | GGCC | 3 cut(s) | 132, 298, 305 |
| BspTI | CTTAAG | 1 cut(s) | 268 |
| BsrDI | GCAATG | 1 cut(s) | 126 |
| BsrGI | TGTACA | 1 cut(s) | 314 |
| BsrI | ACTGG | 1 cut(s) | 117 |
| BssECI | CCNNGG | 2 cut(s) | 151, 300 |
| BssMI | GATC | 1 cut(s) | 159 |
| BssT1I | CCWWGG | 1 cut(s) | 151 |
| Bst4CI | ACNGT | 1 cut(s) | 257 |
| BstAFI | CTTAAG | 1 cut(s) | 268 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 68 |
| BstAUI | TGTACA | 1 cut(s) | 314 |
| BstC8I | GCNNGC | 2 cut(s) | 126, 130 |
| BstDSI | CCRYGG | 1 cut(s) | 300 |
| BstKTI | GATC | 1 cut(s) | 162 |
| BstMBI | GATC | 1 cut(s) | 159 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 68, 125 |
| BstV1I | GCAGC | 1 cut(s) | 74 |
| BstV2I | GAAGAC | 1 cut(s) | 228 |
| BsuRI | GGCC | 3 cut(s) | 132, 298, 305 |
| BtgI | CCRYGG | 1 cut(s) | 300 |
| BtrI | CACGTC | 1 cut(s) | 74 |
| Cac8I | GCNNGC | 2 cut(s) | 126, 130 |
| Cfr13I | GGNCC | 2 cut(s) | 297, 304 |
| Csp6I | GTAC | 1 cut(s) | 315 |
| CviAII | CATG | 1 cut(s) | 157 |
| CviJI | RGCY | 5 cut(s) | 65, 132, 275, 298, 305 |
| CviKI_1 | RGCY | 5 cut(s) | 65, 132, 275, 298, 305 |
| CviQI | GTAC | 1 cut(s) | 315 |
| DpnI | GATC | 1 cut(s) | 161 |
| DpnII | GATC | 1 cut(s) | 159 |
| DriI | GACNNNNNGTC | 1 cut(s) | 259 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 259 |
| Eco130I | CCWWGG | 1 cut(s) | 151 |
| Eco147I | AGGCCT | 1 cut(s) | 132 |
| EcoT14I | CCWWGG | 1 cut(s) | 151 |
| ErhI | CCWWGG | 1 cut(s) | 151 |
| FaeI | CATG | 1 cut(s) | 160 |
| FaiI | YATR | 4 cut(s) | 53, 105, 107, 158 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 117, 149, 251, 283 |
| FaqI | GGGAC | 1 cut(s) | 311 |
| FatI | CATG | 1 cut(s) | 156 |
| FauNDI | CATATG | 1 cut(s) | 105 |
| FbaI | TGATCA | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 2 cut(s) | 63, 189 |
| Fsp4HI | GCNGC | 2 cut(s) | 63, 189 |
| GluI | GCNGC | 2 cut(s) | 63, 189 |
| HaeIII | GGCC | 3 cut(s) | 132, 298, 305 |
| Hin1II | CATG | 1 cut(s) | 160 |
| HinfI | GANTC | 2 cut(s) | 5, 145 |
| Hpy188I | TCNGA | 2 cut(s) | 38, 232 |
| Hpy188III | TCNNGA | 1 cut(s) | 9 |
| HpyAV | CCTTC | 1 cut(s) | 143 |
| HpyCH4III | ACNGT | 1 cut(s) | 257 |
| HpyCH4IV | ACGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 3 cut(s) | 71, 124, 203 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 68, 125 |
| HpySE526I | ACGT | 1 cut(s) | 73 |
| Hsp92II | CATG | 1 cut(s) | 160 |
| Ksp22I | TGATCA | 1 cut(s) | 159 |
| Kzo9I | GATC | 1 cut(s) | 159 |
| LpnPI | CCDG | 2 cut(s) | 98, 114 |
| Lsp1109I | GCAGC | 1 cut(s) | 74 |
| MaeII | ACGT | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 161 |
| MboI | GATC | 1 cut(s) | 159 |
| MboII | GAAGA | 1 cut(s) | 233 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 3 cut(s) | 11, 226, 244 |
| MseI | TTAA | 3 cut(s) | 269, 279, 334 |
| MspCI | CTTAAG | 1 cut(s) | 268 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 68, 125 |
| NdeI | CATATG | 1 cut(s) | 105 |
| NdeII | GATC | 1 cut(s) | 159 |
| NlaIII | CATG | 1 cut(s) | 160 |
| PceI | AGGCCT | 1 cut(s) | 132 |
| PfeI | GAWTC | 1 cut(s) | 145 |
| PkrI | GCNGC | 2 cut(s) | 64, 190 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| PspPI | GGNCC | 2 cut(s) | 297, 304 |
| RsaI | GTAC | 1 cut(s) | 316 |
| RsaNI | GTAC | 1 cut(s) | 315 |
| SaqAI | TTAA | 3 cut(s) | 269, 279, 334 |
| SatI | GCNGC | 2 cut(s) | 63, 189 |
| Sau3AI | GATC | 1 cut(s) | 159 |
| Sau96I | GGNCC | 2 cut(s) | 297, 304 |
| SchI | GAGTC | 1 cut(s) | 14 |
| SetI | ASST | 3 cut(s) | 67, 76, 237 |
| SmlI | CTYRAG | 1 cut(s) | 268 |
| SmoI | CTYRAG | 1 cut(s) | 268 |
| SseBI | AGGCCT | 1 cut(s) | 132 |
| SsiI | CCGC | 2 cut(s) | 188, 191 |
| SspI | AATATT | 1 cut(s) | 244 |
| StuI | AGGCCT | 1 cut(s) | 132 |
| StyI | CCWWGG | 1 cut(s) | 151 |
| TaaI | ACNGT | 1 cut(s) | 257 |
| TaiI | ACGT | 1 cut(s) | 76 |
| TatI | WGTACW | 1 cut(s) | 314 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 1 cut(s) | 145 |
| Tru1I | TTAA | 3 cut(s) | 269, 279, 334 |
| Tru9I | TTAA | 3 cut(s) | 269, 279, 334 |
| TseI | GCWGC | 1 cut(s) | 62 |
| Vha464I | CTTAAG | 1 cut(s) | 268 |