Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 292 |
| AcuI | CTGAAG | 1 cut(s) | 350 |
| AgsI | TTSAA | 5 cut(s) | 107, 182, 215, 413, 491 |
| AluBI | AGCT | 3 cut(s) | 185, 389, 471 |
| AluI | AGCT | 3 cut(s) | 185, 389, 471 |
| AsuC2I | CCSGG | 1 cut(s) | 151 |
| AsuHPI | GGTGA | 1 cut(s) | 284 |
| BccI | CCATC | 1 cut(s) | 332 |
| BcnI | CCSGG | 1 cut(s) | 151 |
| BfaI | CTAG | 2 cut(s) | 386, 435 |
| BlpI | GCTNAGC | 1 cut(s) | 390 |
| Bme1390I | CCNGG | 1 cut(s) | 151 |
| BmrFI | CCNGG | 1 cut(s) | 151 |
| BmsI | GCATC | 1 cut(s) | 231 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 390 |
| BpuEI | CTTGAG | 1 cut(s) | 482 |
| BpuMI | CCSGG | 1 cut(s) | 151 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bse1I | ACTGG | 1 cut(s) | 305 |
| BseGI | GGATG | 1 cut(s) | 343 |
| BseNI | ACTGG | 1 cut(s) | 305 |
| BsiSI | CCGG | 1 cut(s) | 150 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 390 |
| BspACI | CCGC | 1 cut(s) | 292 |
| BspQI | GCTCTTC | 1 cut(s) | 432 |
| BsrI | ACTGG | 1 cut(s) | 305 |
| Bst6I | CTCTTC | 1 cut(s) | 432 |
| BstDEI | CTNAG | 3 cut(s) | 140, 376, 390 |
| BstF5I | GGATG | 1 cut(s) | 343 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 400 |
| BstNSI | RCATGY | 1 cut(s) | 364 |
| BstSCI | CCNGG | 1 cut(s) | 149 |
| BtsCI | GGATG | 1 cut(s) | 343 |
| BtsI | GCAGTG | 1 cut(s) | 180 |
| BtsIMutI | CAGTG | 2 cut(s) | 180, 298 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 248, 283 |
| CviAII | CATG | 3 cut(s) | 29, 361, 365 |
| DdeI | CTNAG | 3 cut(s) | 140, 376, 390 |
| Eam1104I | CTCTTC | 1 cut(s) | 432 |
| EarI | CTCTTC | 1 cut(s) | 432 |
| EciI | GGCGGA | 1 cut(s) | 307 |
| Eco57I | CTGAAG | 1 cut(s) | 350 |
| EcoT22I | ATGCAT | 2 cut(s) | 246, 366 |
| FaeI | CATG | 3 cut(s) | 32, 364, 368 |
| FaiI | YATR | 8 cut(s) | 30, 164, 198, 246, 326, 362, 366, 476 |
| FatI | CATG | 3 cut(s) | 28, 360, 364 |
| FokI | GGATG | 1 cut(s) | 350 |
| FspBI | CTAG | 2 cut(s) | 386, 435 |
| HapII | CCGG | 1 cut(s) | 150 |
| Hin1II | CATG | 3 cut(s) | 32, 364, 368 |
| HinfI | GANTC | 4 cut(s) | 178, 275, 295, 406 |
| HpaII | CCGG | 1 cut(s) | 150 |
| HphI | GGTGA | 1 cut(s) | 284 |
| Hpy188I | TCNGA | 1 cut(s) | 280 |
| Hpy188III | TCNNGA | 1 cut(s) | 461 |
| HpyAV | CCTTC | 3 cut(s) | 64, 94, 328 |
| HpyCH4IV | ACGT | 1 cut(s) | 415 |
| HpyCH4V | TGCA | 4 cut(s) | 126, 244, 324, 364 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 400 |
| HpyF3I | CTNAG | 3 cut(s) | 140, 376, 390 |
| HpySE526I | ACGT | 1 cut(s) | 415 |
| Hsp92II | CATG | 3 cut(s) | 32, 364, 368 |
| LguI | GCTCTTC | 1 cut(s) | 432 |
| LpnPI | CCDG | 3 cut(s) | 163, 286, 380 |
| LweI | GCATC | 1 cut(s) | 231 |
| MaeI | CTAG | 2 cut(s) | 386, 435 |
| MaeII | ACGT | 1 cut(s) | 415 |
| MaeIII | GTNAC | 4 cut(s) | 10, 272, 356, 381 |
| MboII | GAAGA | 3 cut(s) | 343, 401, 419 |
| MfeI | CAATTG | 1 cut(s) | 51 |
| MluCI | AATT | 3 cut(s) | 18, 51, 205 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MnlI | CCTC | 6 cut(s) | 67, 151, 202, 274, 457, 472 |
| Mph1103I | ATGCAT | 2 cut(s) | 246, 366 |
| MseI | TTAA | 3 cut(s) | 92, 168, 372 |
| MspI | CCGG | 1 cut(s) | 150 |
| MspR9I | CCNGG | 1 cut(s) | 151 |
| MunI | CAATTG | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 400 |
| NciI | CCSGG | 1 cut(s) | 151 |
| NlaIII | CATG | 3 cut(s) | 32, 364, 368 |
| NmuCI | GTSAC | 1 cut(s) | 272 |
| NsiI | ATGCAT | 2 cut(s) | 246, 366 |
| NspI | RCATGY | 1 cut(s) | 364 |
| PciSI | GCTCTTC | 1 cut(s) | 432 |
| PfeI | GAWTC | 3 cut(s) | 178, 295, 406 |
| PleI | GAGTC | 1 cut(s) | 269 |
| PpsI | GAGTC | 1 cut(s) | 269 |
| SapI | GCTCTTC | 1 cut(s) | 432 |
| SaqAI | TTAA | 3 cut(s) | 92, 168, 372 |
| SchI | GAGTC | 1 cut(s) | 269 |
| ScrFI | CCNGG | 1 cut(s) | 151 |
| SetI | ASST | 7 cut(s) | 105, 162, 187, 391, 418, 468, 473 |
| SfaNI | GCATC | 1 cut(s) | 231 |
| SmlI | CTYRAG | 1 cut(s) | 461 |
| SmoI | CTYRAG | 1 cut(s) | 461 |
| Sse9I | AATT | 3 cut(s) | 18, 51, 205 |
| SsiI | CCGC | 1 cut(s) | 292 |
| SspMI | CTAG | 2 cut(s) | 386, 435 |
| StyD4I | CCNGG | 1 cut(s) | 149 |
| TaiI | ACGT | 1 cut(s) | 418 |
| TaqI | TCGA | 1 cut(s) | 68 |
| TasI | AATT | 3 cut(s) | 18, 51, 205 |
| TfiI | GAWTC | 3 cut(s) | 178, 295, 406 |
| Tru1I | TTAA | 3 cut(s) | 92, 168, 372 |
| Tru9I | TTAA | 3 cut(s) | 92, 168, 372 |
| TscAI | CASTG | 2 cut(s) | 180, 305 |
| TseFI | GTSAC | 1 cut(s) | 272 |
| Tsp45I | GTSAC | 1 cut(s) | 272 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| TspRI | CASTG | 2 cut(s) | 180, 305 |
| XceI | RCATGY | 1 cut(s) | 364 |
| XspI | CTAG | 2 cut(s) | 386, 435 |
| Zsp2I | ATGCAT | 2 cut(s) | 246, 366 |