Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 2 cut(s) | 303, 322 |
| AluBI | AGCT | 1 cut(s) | 38 |
| AluI | AGCT | 1 cut(s) | 38 |
| Alw26I | GTCTC | 1 cut(s) | 285 |
| Ama87I | CYCGRG | 1 cut(s) | 330 |
| ApeKI | GCWGC | 1 cut(s) | 218 |
| AvaI | CYCGRG | 1 cut(s) | 330 |
| BaeGI | GKGCMC | 1 cut(s) | 138 |
| BbvI | GCAGC | 1 cut(s) | 205 |
| BccI | CCATC | 1 cut(s) | 51 |
| BcoDI | GTCTC | 1 cut(s) | 285 |
| BfaI | CTAG | 2 cut(s) | 243, 272 |
| BfmI | CTRYAG | 1 cut(s) | 101 |
| BisI | GCNGC | 1 cut(s) | 219 |
| BlsI | GCNGC | 1 cut(s) | 220 |
| BmeT110I | CYCGRG | 1 cut(s) | 330 |
| BmsI | GCATC | 1 cut(s) | 316 |
| BpuEI | CTTGAG | 1 cut(s) | 89 |
| Bsa29I | ATCGAT | 1 cut(s) | 121 |
| BseCI | ATCGAT | 1 cut(s) | 121 |
| BseGI | GGATG | 2 cut(s) | 151, 304 |
| BseSI | GKGCMC | 1 cut(s) | 138 |
| BseXI | GCAGC | 1 cut(s) | 205 |
| BshVI | ATCGAT | 1 cut(s) | 121 |
| BsiHKCI | CYCGRG | 1 cut(s) | 330 |
| BsmAI | GTCTC | 1 cut(s) | 285 |
| BsoBI | CYCGRG | 1 cut(s) | 330 |
| Bsp1286I | GDGCHC | 1 cut(s) | 138 |
| Bsp143I | GATC | 2 cut(s) | 118, 122 |
| BspDI | ATCGAT | 1 cut(s) | 121 |
| BssMI | GATC | 2 cut(s) | 118, 122 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 215, 239 |
| BstDEI | CTNAG | 1 cut(s) | 34 |
| BstF5I | GGATG | 2 cut(s) | 151, 304 |
| BstKTI | GATC | 2 cut(s) | 121, 125 |
| BstMAI | GTCTC | 1 cut(s) | 285 |
| BstMBI | GATC | 2 cut(s) | 118, 122 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 20, 215, 239 |
| BstSFI | CTRYAG | 1 cut(s) | 101 |
| BstSLI | GKGCMC | 1 cut(s) | 138 |
| BstV1I | GCAGC | 1 cut(s) | 205 |
| Bsu15I | ATCGAT | 1 cut(s) | 121 |
| BsuTUI | ATCGAT | 1 cut(s) | 121 |
| BtsCI | GGATG | 2 cut(s) | 151, 304 |
| ClaI | ATCGAT | 1 cut(s) | 121 |
| Csp6I | GTAC | 2 cut(s) | 302, 321 |
| CviAII | CATG | 2 cut(s) | 52, 107 |
| CviJI | RGCY | 3 cut(s) | 28, 38, 271 |
| CviKI_1 | RGCY | 3 cut(s) | 28, 38, 271 |
| CviQI | GTAC | 2 cut(s) | 302, 321 |
| DdeI | CTNAG | 1 cut(s) | 34 |
| DpnI | GATC | 2 cut(s) | 120, 124 |
| DpnII | GATC | 2 cut(s) | 118, 122 |
| Eco88I | CYCGRG | 1 cut(s) | 330 |
| FaeI | CATG | 2 cut(s) | 55, 110 |
| FaiI | YATR | 6 cut(s) | 16, 18, 53, 108, 143, 160 |
| FatI | CATG | 2 cut(s) | 51, 106 |
| Fnu4HI | GCNGC | 1 cut(s) | 219 |
| FokI | GGATG | 2 cut(s) | 158, 311 |
| Fsp4HI | GCNGC | 1 cut(s) | 219 |
| FspBI | CTAG | 2 cut(s) | 243, 272 |
| GluI | GCNGC | 1 cut(s) | 219 |
| Hin1II | CATG | 2 cut(s) | 55, 110 |
| HinfI | GANTC | 1 cut(s) | 278 |
| Hpy188I | TCNGA | 3 cut(s) | 48, 127, 262 |
| Hpy188III | TCNNGA | 2 cut(s) | 68, 296 |
| HpyCH4V | TGCA | 1 cut(s) | 221 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 20, 215, 239 |
| HpyF3I | CTNAG | 1 cut(s) | 34 |
| Hsp92II | CATG | 2 cut(s) | 55, 110 |
| Kzo9I | GATC | 2 cut(s) | 118, 122 |
| LmnI | GCTCC | 1 cut(s) | 86 |
| LpnPI | CCDG | 4 cut(s) | 9, 170, 281, 297 |
| Lsp1109I | GCAGC | 1 cut(s) | 205 |
| LweI | GCATC | 1 cut(s) | 316 |
| MaeI | CTAG | 2 cut(s) | 243, 272 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 2 cut(s) | 120, 124 |
| MboI | GATC | 2 cut(s) | 118, 122 |
| MboII | GAAGA | 2 cut(s) | 128, 190 |
| MhlI | GDGCHC | 1 cut(s) | 138 |
| MluCI | AATT | 2 cut(s) | 129, 250 |
| MlyI | GAGTC | 1 cut(s) | 287 |
| MnlI | CCTC | 2 cut(s) | 304, 326 |
| MseI | TTAA | 2 cut(s) | 249, 337 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 20, 215, 239 |
| NdeII | GATC | 2 cut(s) | 118, 122 |
| NlaIII | CATG | 2 cut(s) | 55, 110 |
| PaeR7I | CTCGAG | 1 cut(s) | 330 |
| PkrI | GCNGC | 1 cut(s) | 220 |
| PleI | GAGTC | 1 cut(s) | 286 |
| PpsI | GAGTC | 1 cut(s) | 286 |
| PspXI | VCTCGAGB | 1 cut(s) | 330 |
| RsaI | GTAC | 2 cut(s) | 303, 322 |
| RsaNI | GTAC | 2 cut(s) | 302, 321 |
| SaqAI | TTAA | 2 cut(s) | 249, 337 |
| SatI | GCNGC | 1 cut(s) | 219 |
| Sau3AI | GATC | 2 cut(s) | 118, 122 |
| SchI | GAGTC | 1 cut(s) | 287 |
| SduI | GDGCHC | 1 cut(s) | 138 |
| SetI | ASST | 5 cut(s) | 40, 189, 230, 240, 337 |
| SfaNI | GCATC | 1 cut(s) | 316 |
| SfcI | CTRYAG | 1 cut(s) | 101 |
| Sfr274I | CTCGAG | 1 cut(s) | 330 |
| SlaI | CTCGAG | 1 cut(s) | 330 |
| SmlI | CTYRAG | 2 cut(s) | 68, 330 |
| SmoI | CTYRAG | 2 cut(s) | 68, 330 |
| Sse9I | AATT | 2 cut(s) | 129, 250 |
| SspMI | CTAG | 2 cut(s) | 243, 272 |
| TaqI | TCGA | 2 cut(s) | 121, 331 |
| TasI | AATT | 2 cut(s) | 129, 250 |
| TatI | WGTACW | 2 cut(s) | 301, 320 |
| Tru1I | TTAA | 2 cut(s) | 249, 337 |
| Tru9I | TTAA | 2 cut(s) | 249, 337 |
| TseI | GCWGC | 1 cut(s) | 218 |
| TspGWI | ACGGA | 1 cut(s) | 191 |
| XhoI | CTCGAG | 1 cut(s) | 330 |
| XspI | CTAG | 2 cut(s) | 243, 272 |