Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 102 |
| AfaI | GTAC | 1 cut(s) | 351 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 217, 218, 410 |
| AflIII | ACRYGT | 1 cut(s) | 114 |
| AgsI | TTSAA | 1 cut(s) | 32 |
| AjiI | CACGTC | 1 cut(s) | 207 |
| AjnI | CCWGG | 1 cut(s) | 6 |
| AluBI | AGCT | 1 cut(s) | 249 |
| AluI | AGCT | 1 cut(s) | 249 |
| AoxI | GGCC | 3 cut(s) | 188, 261, 369 |
| ApeKI | GCWGC | 1 cut(s) | 314 |
| AspS9I | GGNCC | 1 cut(s) | 189 |
| BaeGI | GKGCMC | 1 cut(s) | 212 |
| BbvI | GCAGC | 1 cut(s) | 301 |
| BccI | CCATC | 1 cut(s) | 236 |
| BciT130I | CCWGG | 1 cut(s) | 8 |
| BfaI | CTAG | 1 cut(s) | 324 |
| BisI | GCNGC | 1 cut(s) | 315 |
| BlsI | GCNGC | 1 cut(s) | 316 |
| BmcAI | AGTACT | 1 cut(s) | 351 |
| Bme1390I | CCNGG | 1 cut(s) | 8 |
| BmgBI | CACGTC | 1 cut(s) | 207 |
| BmgT120I | GGNCC | 1 cut(s) | 189 |
| BmiI | GGNNCC | 1 cut(s) | 191 |
| BmrFI | CCNGG | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 1 cut(s) | 394 |
| BsaJI | CCNNGG | 2 cut(s) | 215, 366 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 294, 324 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 217, 218, 410 |
| BseBI | CCWGG | 1 cut(s) | 8 |
| BseDI | CCNNGG | 2 cut(s) | 215, 366 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 217, 218, 410 |
| BseSI | GKGCMC | 1 cut(s) | 212 |
| BseXI | GCAGC | 1 cut(s) | 301 |
| BseYI | CCCAGC | 1 cut(s) | 193 |
| BshFI | GGCC | 3 cut(s) | 190, 263, 371 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 217, 218, 410 |
| BsnI | GGCC | 3 cut(s) | 190, 263, 371 |
| Bsp1286I | GDGCHC | 1 cut(s) | 212 |
| BspANI | GGCC | 3 cut(s) | 190, 263, 371 |
| BspHI | TCATGA | 1 cut(s) | 228 |
| BspLI | GGNNCC | 1 cut(s) | 191 |
| BssECI | CCNNGG | 2 cut(s) | 215, 366 |
| BssT1I | CCWWGG | 1 cut(s) | 215 |
| Bst2UI | CCWGG | 1 cut(s) | 8 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 162 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 320 |
| BstNI | CCWGG | 1 cut(s) | 8 |
| BstNSI | RCATGY | 2 cut(s) | 118, 164 |
| BstSCI | CCNGG | 1 cut(s) | 6 |
| BstSLI | GKGCMC | 1 cut(s) | 212 |
| BstV1I | GCAGC | 1 cut(s) | 301 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 201 |
| BsuRI | GGCC | 3 cut(s) | 190, 263, 371 |
| BtrI | CACGTC | 1 cut(s) | 207 |
| Cac8I | GCNNGC | 1 cut(s) | 162 |
| CciI | TCATGA | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 1 cut(s) | 189 |
| Csp6I | GTAC | 1 cut(s) | 350 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 253, 288 |
| CviAII | CATG | 5 cut(s) | 115, 123, 161, 229, 358 |
| CviQI | GTAC | 1 cut(s) | 350 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Eco130I | CCWWGG | 1 cut(s) | 215 |
| Eco147I | AGGCCT | 1 cut(s) | 371 |
| EcoO109I | RGGNCCY | 1 cut(s) | 189 |
| EcoRII | CCWGG | 1 cut(s) | 6 |
| EcoT14I | CCWWGG | 1 cut(s) | 215 |
| ErhI | CCWWGG | 1 cut(s) | 215 |
| FaeI | CATG | 5 cut(s) | 118, 126, 164, 232, 361 |
| FatI | CATG | 5 cut(s) | 114, 122, 160, 228, 357 |
| Fnu4HI | GCNGC | 1 cut(s) | 315 |
| Fsp4HI | GCNGC | 1 cut(s) | 315 |
| FspBI | CTAG | 1 cut(s) | 324 |
| GluI | GCNGC | 1 cut(s) | 315 |
| GsaI | CCCAGC | 1 cut(s) | 197 |
| HaeIII | GGCC | 3 cut(s) | 190, 263, 371 |
| Hin1II | CATG | 5 cut(s) | 118, 126, 164, 232, 361 |
| HindIII | AAGCTT | 1 cut(s) | 247 |
| Hpy166II | GTNNAC | 1 cut(s) | 204 |
| Hpy188I | TCNGA | 1 cut(s) | 22 |
| Hpy188III | TCNNGA | 1 cut(s) | 229 |
| Hpy8I | GTNNAC | 1 cut(s) | 204 |
| HpyAV | CCTTC | 1 cut(s) | 82 |
| HpyCH4IV | ACGT | 1 cut(s) | 206 |
| HpyCH4V | TGCA | 5 cut(s) | 122, 160, 164, 317, 401 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 320 |
| HpySE526I | ACGT | 1 cut(s) | 206 |
| Hsp92II | CATG | 5 cut(s) | 118, 126, 164, 232, 361 |
| LmnI | GCTCC | 2 cut(s) | 22, 67 |
| LpnPI | CCDG | 4 cut(s) | 20, 37, 207, 367 |
| Lsp1109I | GCAGC | 1 cut(s) | 301 |
| MaeI | CTAG | 1 cut(s) | 324 |
| MaeII | ACGT | 1 cut(s) | 206 |
| MboII | GAAGA | 2 cut(s) | 155, 187 |
| MfeI | CAATTG | 1 cut(s) | 265 |
| MhlI | GDGCHC | 1 cut(s) | 212 |
| MluCI | AATT | 2 cut(s) | 76, 265 |
| MnlI | CCTC | 6 cut(s) | 59, 253, 292, 351, 361, 369 |
| MseI | TTAA | 1 cut(s) | 111 |
| MslI | CAYNNNNRTG | 1 cut(s) | 113 |
| MspR9I | CCNGG | 1 cut(s) | 8 |
| MunI | CAATTG | 1 cut(s) | 265 |
| MvaI | CCWGG | 1 cut(s) | 8 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 320 |
| NlaIII | CATG | 5 cut(s) | 118, 126, 164, 232, 361 |
| NlaIV | GGNNCC | 1 cut(s) | 191 |
| NmeAIII | GCCGAG | 1 cut(s) | 391 |
| NspI | RCATGY | 2 cut(s) | 118, 164 |
| PaeI | GCATGC | 1 cut(s) | 164 |
| PagI | TCATGA | 1 cut(s) | 228 |
| PceI | AGGCCT | 1 cut(s) | 371 |
| PciI | ACATGT | 1 cut(s) | 114 |
| PkrI | GCNGC | 1 cut(s) | 316 |
| PscI | ACATGT | 1 cut(s) | 114 |
| PsiI | TTATAA | 1 cut(s) | 102 |
| Psp6I | CCWGG | 1 cut(s) | 6 |
| PspFI | CCCAGC | 1 cut(s) | 193 |
| PspGI | CCWGG | 1 cut(s) | 6 |
| PspN4I | GGNNCC | 1 cut(s) | 191 |
| PspPI | GGNCC | 1 cut(s) | 189 |
| RsaI | GTAC | 1 cut(s) | 351 |
| RsaNI | GTAC | 1 cut(s) | 350 |
| RseI | CAYNNNNRTG | 1 cut(s) | 113 |
| SaqAI | TTAA | 1 cut(s) | 111 |
| SatI | GCNGC | 1 cut(s) | 315 |
| Sau96I | GGNCC | 1 cut(s) | 189 |
| ScaI | AGTACT | 1 cut(s) | 351 |
| ScrFI | CCNGG | 1 cut(s) | 8 |
| SduI | GDGCHC | 1 cut(s) | 212 |
| SetI | ASST | 3 cut(s) | 12, 209, 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 113 |
| SmlI | CTYRAG | 1 cut(s) | 373 |
| SmoI | CTYRAG | 1 cut(s) | 373 |
| SphI | GCATGC | 1 cut(s) | 164 |
| Sse9I | AATT | 2 cut(s) | 76, 265 |
| SseBI | AGGCCT | 1 cut(s) | 371 |
| SspI | AATATT | 1 cut(s) | 238 |
| SspMI | CTAG | 1 cut(s) | 324 |
| StuI | AGGCCT | 1 cut(s) | 371 |
| StyD4I | CCNGG | 1 cut(s) | 6 |
| StyI | CCWWGG | 1 cut(s) | 215 |
| TaiI | ACGT | 1 cut(s) | 209 |
| TasI | AATT | 2 cut(s) | 76, 265 |
| TatI | WGTACW | 1 cut(s) | 349 |
| Tru1I | TTAA | 1 cut(s) | 111 |
| Tru9I | TTAA | 1 cut(s) | 111 |
| TseI | GCWGC | 1 cut(s) | 314 |
| TspDTI | ATGAA | 2 cut(s) | 248, 281 |
| TspGWI | ACGGA | 1 cut(s) | 80 |
| XceI | RCATGY | 2 cut(s) | 118, 164 |
| XspI | CTAG | 1 cut(s) | 324 |
| ZrmI | AGTACT | 1 cut(s) | 351 |