Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 57, 106 |
| AclWI | GGATC | 1 cut(s) | 246 |
| AcoI | YGGCCR | 1 cut(s) | 203 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 124, 212 |
| AjiI | CACGTC | 1 cut(s) | 95 |
| AlwI | GGATC | 1 cut(s) | 246 |
| AoxI | GGCC | 2 cut(s) | 191, 203 |
| ApeKI | GCWGC | 1 cut(s) | 138 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AvaII | GGWCC | 1 cut(s) | 223 |
| BanII | GRGCYC | 1 cut(s) | 117 |
| BbvI | GCAGC | 1 cut(s) | 150 |
| BisI | GCNGC | 2 cut(s) | 58, 139 |
| BlsI | GCNGC | 2 cut(s) | 59, 140 |
| Bme18I | GGWCC | 1 cut(s) | 223 |
| BmgBI | CACGTC | 1 cut(s) | 95 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BmiI | GGNNCC | 1 cut(s) | 116 |
| BpmI | CTGGAG | 1 cut(s) | 239 |
| BsaJI | CCNNGG | 1 cut(s) | 164 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 124, 212 |
| BseDI | CCNNGG | 1 cut(s) | 164 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 124, 212 |
| BseXI | GCAGC | 1 cut(s) | 150 |
| BshFI | GGCC | 2 cut(s) | 193, 205 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 124, 212 |
| BsnI | GGCC | 2 cut(s) | 193, 205 |
| Bsp1286I | GDGCHC | 1 cut(s) | 117 |
| Bsp143I | GATC | 1 cut(s) | 238 |
| Bsp19I | CCATGG | 1 cut(s) | 164 |
| BspACI | CCGC | 2 cut(s) | 57, 106 |
| BspANI | GGCC | 2 cut(s) | 193, 205 |
| BspLI | GGNNCC | 1 cut(s) | 116 |
| BspPI | GGATC | 1 cut(s) | 246 |
| BspQI | GCTCTTC | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 164 |
| BssMI | GATC | 1 cut(s) | 238 |
| BssT1I | CCWWGG | 1 cut(s) | 164 |
| Bst4CI | ACNGT | 1 cut(s) | 52 |
| Bst6I | CTCTTC | 2 cut(s) | 67, 71 |
| BstDSI | CCRYGG | 1 cut(s) | 164 |
| BstKTI | GATC | 1 cut(s) | 241 |
| BstMBI | GATC | 1 cut(s) | 238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 112 |
| BstV1I | GCAGC | 1 cut(s) | 150 |
| BstX2I | RGATCY | 1 cut(s) | 238 |
| BstYI | RGATCY | 1 cut(s) | 238 |
| BsuRI | GGCC | 2 cut(s) | 193, 205 |
| BtgI | CCRYGG | 1 cut(s) | 164 |
| BtrI | CACGTC | 1 cut(s) | 95 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 33, 68 |
| CviAII | CATG | 4 cut(s) | 72, 89, 165, 260 |
| CviJI | RGCY | 6 cut(s) | 60, 115, 141, 193, 205, 217 |
| CviKI_1 | RGCY | 6 cut(s) | 60, 115, 141, 193, 205, 217 |
| DpnI | GATC | 1 cut(s) | 240 |
| DpnII | GATC | 1 cut(s) | 238 |
| EaeI | YGGCCR | 1 cut(s) | 203 |
| Eam1104I | CTCTTC | 2 cut(s) | 67, 71 |
| EarI | CTCTTC | 2 cut(s) | 67, 71 |
| Eco130I | CCWWGG | 1 cut(s) | 164 |
| Eco147I | AGGCCT | 1 cut(s) | 193 |
| Eco24I | GRGCYC | 1 cut(s) | 117 |
| Eco47I | GGWCC | 1 cut(s) | 223 |
| EcoO109I | RGGNCCY | 1 cut(s) | 223 |
| EcoT14I | CCWWGG | 1 cut(s) | 164 |
| EcoT22I | ATGCAT | 1 cut(s) | 73 |
| EcoT38I | GRGCYC | 1 cut(s) | 117 |
| ErhI | CCWWGG | 1 cut(s) | 164 |
| FaeI | CATG | 4 cut(s) | 75, 92, 168, 263 |
| FaiI | YATR | 9 cut(s) | 6, 69, 73, 83, 90, 166, 183, 230, 261 |
| FatI | CATG | 4 cut(s) | 71, 88, 164, 259 |
| Fnu4HI | GCNGC | 2 cut(s) | 58, 139 |
| FriOI | GRGCYC | 1 cut(s) | 117 |
| Fsp4HI | GCNGC | 2 cut(s) | 58, 139 |
| GluI | GCNGC | 2 cut(s) | 58, 139 |
| GsuI | CTGGAG | 1 cut(s) | 239 |
| HaeIII | GGCC | 2 cut(s) | 193, 205 |
| Hin1II | CATG | 4 cut(s) | 75, 92, 168, 263 |
| Hpy188I | TCNGA | 2 cut(s) | 119, 243 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyAV | CCTTC | 1 cut(s) | 103 |
| HpyCH4III | ACNGT | 1 cut(s) | 52 |
| HpyCH4IV | ACGT | 1 cut(s) | 94 |
| HpyCH4V | TGCA | 3 cut(s) | 30, 71, 88 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 112 |
| HpySE526I | ACGT | 1 cut(s) | 94 |
| Hsp92II | CATG | 4 cut(s) | 75, 92, 168, 263 |
| Kzo9I | GATC | 1 cut(s) | 238 |
| LguI | GCTCTTC | 1 cut(s) | 67 |
| LmnI | GCTCC | 1 cut(s) | 120 |
| LpnPI | CCDG | 4 cut(s) | 36, 110, 155, 203 |
| Lsp1109I | GCAGC | 1 cut(s) | 150 |
| MaeII | ACGT | 1 cut(s) | 94 |
| MalI | GATC | 1 cut(s) | 240 |
| MboI | GATC | 1 cut(s) | 238 |
| MboII | GAAGA | 2 cut(s) | 54, 88 |
| MflI | RGATCY | 1 cut(s) | 238 |
| MhlI | GDGCHC | 1 cut(s) | 117 |
| MnlI | CCTC | 2 cut(s) | 205, 214 |
| Mph1103I | ATGCAT | 1 cut(s) | 73 |
| MseI | TTAA | 1 cut(s) | 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 112 |
| NcoI | CCATGG | 1 cut(s) | 164 |
| NdeII | GATC | 1 cut(s) | 238 |
| NlaIII | CATG | 4 cut(s) | 75, 92, 168, 263 |
| NlaIV | GGNNCC | 1 cut(s) | 116 |
| NmeAIII | GCCGAG | 1 cut(s) | 181 |
| NsiI | ATGCAT | 1 cut(s) | 73 |
| PceI | AGGCCT | 1 cut(s) | 193 |
| PciSI | GCTCTTC | 1 cut(s) | 67 |
| PkrI | GCNGC | 2 cut(s) | 59, 140 |
| PpuMI | RGGWCCY | 1 cut(s) | 223 |
| Psp5II | RGGWCCY | 1 cut(s) | 223 |
| PspN4I | GGNNCC | 1 cut(s) | 116 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| PspPPI | RGGWCCY | 1 cut(s) | 223 |
| PsuI | RGATCY | 1 cut(s) | 238 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SapI | GCTCTTC | 1 cut(s) | 67 |
| SaqAI | TTAA | 1 cut(s) | 234 |
| SatI | GCNGC | 2 cut(s) | 58, 139 |
| Sau3AI | GATC | 1 cut(s) | 238 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| SduI | GDGCHC | 1 cut(s) | 117 |
| SetI | ASST | 4 cut(s) | 97, 129, 188, 228 |
| SinI | GGWCC | 1 cut(s) | 223 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| SseBI | AGGCCT | 1 cut(s) | 193 |
| SsiI | CCGC | 2 cut(s) | 57, 106 |
| StuI | AGGCCT | 1 cut(s) | 193 |
| StyI | CCWWGG | 1 cut(s) | 164 |
| TaaI | ACNGT | 1 cut(s) | 52 |
| TaiI | ACGT | 1 cut(s) | 97 |
| TauI | GCSGC | 1 cut(s) | 60 |
| Tru1I | TTAA | 1 cut(s) | 234 |
| Tru9I | TTAA | 1 cut(s) | 234 |
| TseI | GCWGC | 1 cut(s) | 138 |
| VpaK11BI | GGWCC | 1 cut(s) | 223 |
| Zsp2I | ATGCAT | 1 cut(s) | 73 |