Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 56 - 121 | 1.8e-10 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 285 |
| AfaI | GTAC | 1 cut(s) | 125 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 63 |
| AgsI | TTSAA | 2 cut(s) | 257, 316 |
| Alw21I | GWGCWC | 1 cut(s) | 229 |
| Alw26I | GTCTC | 2 cut(s) | 38, 326 |
| AspS9I | GGNCC | 1 cut(s) | 66 |
| AvaII | GGWCC | 1 cut(s) | 66 |
| Bbv12I | GWGCWC | 1 cut(s) | 229 |
| BccI | CCATC | 4 cut(s) | 32, 57, 191, 249 |
| BcoDI | GTCTC | 2 cut(s) | 38, 326 |
| BfaI | CTAG | 1 cut(s) | 272 |
| Bme18I | GGWCC | 1 cut(s) | 66 |
| BmgT120I | GGNCC | 1 cut(s) | 66 |
| BmrI | ACTGGG | 1 cut(s) | 314 |
| BmsI | GCATC | 1 cut(s) | 266 |
| BmuI | ACTGGG | 1 cut(s) | 314 |
| BsaBI | GATNNNNATC | 1 cut(s) | 23 |
| BsaI | GGTCTC | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 1 cut(s) | 69 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 63 |
| Bse1I | ACTGG | 2 cut(s) | 320, 372 |
| Bse8I | GATNNNNATC | 1 cut(s) | 23 |
| BseDI | CCNNGG | 1 cut(s) | 69 |
| BseGI | GGATG | 1 cut(s) | 281 |
| BseJI | GATNNNNATC | 1 cut(s) | 23 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 63 |
| BseNI | ACTGG | 2 cut(s) | 320, 372 |
| BsgI | GTGCAG | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 1 cut(s) | 229 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 63 |
| BsmAI | GTCTC | 2 cut(s) | 38, 326 |
| Bso31I | GGTCTC | 1 cut(s) | 38 |
| Bsp1286I | GDGCHC | 1 cut(s) | 229 |
| Bsp19I | CCATGG | 1 cut(s) | 69 |
| BspTNI | GGTCTC | 1 cut(s) | 38 |
| BsrI | ACTGG | 2 cut(s) | 320, 372 |
| BssECI | CCNNGG | 1 cut(s) | 69 |
| BssT1I | CCWWGG | 1 cut(s) | 69 |
| Bst4CI | ACNGT | 2 cut(s) | 49, 160 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 215, 224 |
| BstDEI | CTNAG | 1 cut(s) | 301 |
| BstDSI | CCRYGG | 1 cut(s) | 69 |
| BstF5I | GGATG | 1 cut(s) | 281 |
| BstMAI | GTCTC | 2 cut(s) | 38, 326 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 215, 224, 377 |
| BstNSI | RCATGY | 2 cut(s) | 143, 263 |
| BtgI | CCRYGG | 1 cut(s) | 69 |
| BtsCI | GGATG | 1 cut(s) | 281 |
| BtsI | GCAGTG | 1 cut(s) | 216 |
| BtsIMutI | CAGTG | 3 cut(s) | 156, 216, 365 |
| Cfr13I | GGNCC | 1 cut(s) | 66 |
| Csp6I | GTAC | 1 cut(s) | 124 |
| CviAII | CATG | 4 cut(s) | 70, 110, 140, 260 |
| CviJI | RGCY | 4 cut(s) | 103, 108, 169, 287 |
| CviKI_1 | RGCY | 4 cut(s) | 103, 108, 169, 287 |
| CviQI | GTAC | 1 cut(s) | 124 |
| DdeI | CTNAG | 1 cut(s) | 301 |
| Eco130I | CCWWGG | 1 cut(s) | 69 |
| Eco31I | GGTCTC | 1 cut(s) | 38 |
| Eco47I | GGWCC | 1 cut(s) | 66 |
| Eco57I | CTGAAG | 1 cut(s) | 285 |
| EcoT14I | CCWWGG | 1 cut(s) | 69 |
| ErhI | CCWWGG | 1 cut(s) | 69 |
| FaeI | CATG | 4 cut(s) | 73, 113, 143, 263 |
| FaiI | YATR | 8 cut(s) | 17, 71, 96, 111, 141, 261, 290, 329 |
| FatI | CATG | 4 cut(s) | 69, 109, 139, 259 |
| FokI | GGATG | 1 cut(s) | 288 |
| FspBI | CTAG | 1 cut(s) | 272 |
| Hin1II | CATG | 4 cut(s) | 73, 113, 143, 263 |
| HinfI | GANTC | 3 cut(s) | 19, 81, 338 |
| HpyAV | CCTTC | 2 cut(s) | 353, 393 |
| HpyCH4III | ACNGT | 2 cut(s) | 49, 160 |
| HpyCH4V | TGCA | 3 cut(s) | 154, 209, 218 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 215, 224, 377 |
| HpyF3I | CTNAG | 1 cut(s) | 301 |
| Hsp92II | CATG | 4 cut(s) | 73, 113, 143, 263 |
| LpnPI | CCDG | 4 cut(s) | 134, 188, 333, 353 |
| LweI | GCATC | 1 cut(s) | 266 |
| MaeI | CTAG | 1 cut(s) | 272 |
| MhlI | GDGCHC | 1 cut(s) | 229 |
| MluCI | AATT | 2 cut(s) | 30, 324 |
| MnlI | CCTC | 5 cut(s) | 126, 167, 243, 277, 285 |
| MslI | CAYNNNNRTG | 1 cut(s) | 274 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 215, 224, 377 |
| NcoI | CCATGG | 1 cut(s) | 69 |
| NlaIII | CATG | 4 cut(s) | 73, 113, 143, 263 |
| NspI | RCATGY | 2 cut(s) | 143, 263 |
| PfeI | GAWTC | 3 cut(s) | 19, 81, 338 |
| PspPI | GGNCC | 1 cut(s) | 66 |
| RsaI | GTAC | 1 cut(s) | 125 |
| RsaNI | GTAC | 1 cut(s) | 124 |
| RseI | CAYNNNNRTG | 1 cut(s) | 274 |
| Sau96I | GGNCC | 1 cut(s) | 66 |
| SduI | GDGCHC | 1 cut(s) | 229 |
| SetI | ASST | 3 cut(s) | 235, 296, 404 |
| SfaNI | GCATC | 1 cut(s) | 266 |
| SinI | GGWCC | 1 cut(s) | 66 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 274 |
| Sse9I | AATT | 2 cut(s) | 30, 324 |
| SspMI | CTAG | 1 cut(s) | 272 |
| StyI | CCWWGG | 1 cut(s) | 69 |
| TaaI | ACNGT | 2 cut(s) | 49, 160 |
| TaqI | TCGA | 2 cut(s) | 79, 229 |
| TasI | AATT | 2 cut(s) | 30, 324 |
| TfiI | GAWTC | 3 cut(s) | 19, 81, 338 |
| TscAI | CASTG | 3 cut(s) | 163, 216, 372 |
| TspDTI | ATGAA | 2 cut(s) | 17, 175 |
| TspRI | CASTG | 3 cut(s) | 163, 216, 372 |
| VpaK11BI | GGWCC | 1 cut(s) | 66 |
| XceI | RCATGY | 2 cut(s) | 143, 263 |
| XspI | CTAG | 1 cut(s) | 272 |