Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Inhibitor_I29 | PF08246 | 52 - 110 | 5.3e-18 | Cathepsin propeptide inhibitor domain (I29) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 186 |
| AccII | CGCG | 1 cut(s) | 183 |
| AclI | AACGTT | 1 cut(s) | 141 |
| AcsI | RAATTY | 1 cut(s) | 253 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 337 |
| AgsI | TTSAA | 2 cut(s) | 229, 259 |
| AjnI | CCWGG | 1 cut(s) | 332 |
| AoxI | GGCC | 1 cut(s) | 292 |
| ApeKI | GCWGC | 1 cut(s) | 110 |
| ApoI | RAATTY | 1 cut(s) | 253 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| BbsI | GAAGAC | 2 cut(s) | 22, 145 |
| BbvI | GCAGC | 1 cut(s) | 97 |
| BccI | CCATC | 1 cut(s) | 160 |
| BciT130I | CCWGG | 1 cut(s) | 334 |
| BclI | TGATCA | 1 cut(s) | 81 |
| BfmI | CTRYAG | 1 cut(s) | 288 |
| BisI | GCNGC | 1 cut(s) | 111 |
| BlsI | GCNGC | 1 cut(s) | 112 |
| Bme1390I | CCNGG | 1 cut(s) | 334 |
| BmiI | GGNNCC | 1 cut(s) | 61 |
| BmrFI | CCNGG | 1 cut(s) | 334 |
| BmsI | GCATC | 2 cut(s) | 122, 274 |
| BpiI | GAAGAC | 2 cut(s) | 22, 145 |
| BpuEI | CTTGAG | 2 cut(s) | 87, 132 |
| BsaJI | CCNNGG | 3 cut(s) | 90, 332, 333 |
| BsaWI | WCCGGW | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 337 |
| BseBI | CCWGG | 1 cut(s) | 334 |
| BseDI | CCNNGG | 3 cut(s) | 90, 332, 333 |
| BseGI | GGATG | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 337 |
| BseXI | GCAGC | 1 cut(s) | 97 |
| Bsh1236I | CGCG | 1 cut(s) | 183 |
| BshFI | GGCC | 1 cut(s) | 294 |
| BsiSI | CCGG | 1 cut(s) | 134 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 337 |
| BsnI | GGCC | 1 cut(s) | 294 |
| Bsp143I | GATC | 2 cut(s) | 81, 121 |
| BspANI | GGCC | 1 cut(s) | 294 |
| BspFNI | CGCG | 1 cut(s) | 183 |
| BspLI | GGNNCC | 1 cut(s) | 61 |
| BssECI | CCNNGG | 3 cut(s) | 90, 332, 333 |
| BssMI | GATC | 2 cut(s) | 81, 121 |
| Bst2UI | CCWGG | 1 cut(s) | 334 |
| Bst4CI | ACNGT | 1 cut(s) | 289 |
| Bst6I | CTCTTC | 2 cut(s) | 29, 195 |
| BstF5I | GGATG | 1 cut(s) | 171 |
| BstFNI | CGCG | 1 cut(s) | 183 |
| BstKTI | GATC | 2 cut(s) | 84, 124 |
| BstMBI | GATC | 2 cut(s) | 81, 121 |
| BstNI | CCWGG | 1 cut(s) | 334 |
| BstSCI | CCNGG | 1 cut(s) | 332 |
| BstSFI | CTRYAG | 1 cut(s) | 288 |
| BstUI | CGCG | 1 cut(s) | 183 |
| BstV1I | GCAGC | 1 cut(s) | 97 |
| BstV2I | GAAGAC | 2 cut(s) | 22, 145 |
| BsuRI | GGCC | 1 cut(s) | 294 |
| BtsCI | GGATG | 1 cut(s) | 171 |
| CseI | GACGC | 1 cut(s) | 172 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviJI | RGCY | 2 cut(s) | 110, 294 |
| CviKI_1 | RGCY | 2 cut(s) | 110, 294 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DpnI | GATC | 2 cut(s) | 83, 123 |
| DpnII | GATC | 2 cut(s) | 81, 121 |
| Eam1104I | CTCTTC | 2 cut(s) | 29, 195 |
| EarI | CTCTTC | 2 cut(s) | 29, 195 |
| Eco147I | AGGCCT | 1 cut(s) | 294 |
| EcoRII | CCWGG | 1 cut(s) | 332 |
| FaiI | YATR | 4 cut(s) | 47, 74, 224, 314 |
| FbaI | TGATCA | 1 cut(s) | 81 |
| FblI | GTMKAC | 1 cut(s) | 186 |
| Fnu4HI | GCNGC | 1 cut(s) | 111 |
| FokI | GGATG | 1 cut(s) | 178 |
| Fsp4HI | GCNGC | 1 cut(s) | 111 |
| GluI | GCNGC | 1 cut(s) | 111 |
| HaeIII | GGCC | 1 cut(s) | 294 |
| HapII | CCGG | 1 cut(s) | 134 |
| HgaI | GACGC | 1 cut(s) | 172 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HpaII | CCGG | 1 cut(s) | 134 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy166II | GTNNAC | 3 cut(s) | 139, 187, 285 |
| Hpy188I | TCNGA | 4 cut(s) | 59, 86, 118, 270 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| Hpy8I | GTNNAC | 3 cut(s) | 139, 187, 285 |
| HpyCH4III | ACNGT | 1 cut(s) | 289 |
| HpyCH4IV | ACGT | 2 cut(s) | 141, 236 |
| HpyCH4V | TGCA | 1 cut(s) | 113 |
| HpySE526I | ACGT | 2 cut(s) | 141, 236 |
| Ksp22I | TGATCA | 1 cut(s) | 81 |
| Kzo9I | GATC | 2 cut(s) | 81, 121 |
| LpnPI | CCDG | 3 cut(s) | 147, 319, 346 |
| Lsp1109I | GCAGC | 1 cut(s) | 97 |
| LweI | GCATC | 2 cut(s) | 122, 274 |
| MaeII | ACGT | 2 cut(s) | 141, 236 |
| MalI | GATC | 2 cut(s) | 83, 123 |
| MboI | GATC | 2 cut(s) | 81, 121 |
| MboII | GAAGA | 4 cut(s) | 16, 27, 145, 212 |
| MluCI | AATT | 4 cut(s) | 96, 253, 278, 349 |
| MnlI | CCTC | 4 cut(s) | 32, 100, 151, 305 |
| MspI | CCGG | 1 cut(s) | 134 |
| MspR9I | CCNGG | 1 cut(s) | 334 |
| MvaI | CCWGG | 1 cut(s) | 334 |
| MvnI | CGCG | 1 cut(s) | 183 |
| NdeII | GATC | 2 cut(s) | 81, 121 |
| NlaIV | GGNNCC | 1 cut(s) | 61 |
| NmeAIII | GCCGAG | 1 cut(s) | 71 |
| PasI | CCCWGGG | 1 cut(s) | 333 |
| PceI | AGGCCT | 1 cut(s) | 294 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PkrI | GCNGC | 1 cut(s) | 112 |
| Psp1406I | AACGTT | 1 cut(s) | 141 |
| Psp6I | CCWGG | 1 cut(s) | 332 |
| PspGI | CCWGG | 1 cut(s) | 332 |
| PspN4I | GGNNCC | 1 cut(s) | 61 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| SatI | GCNGC | 1 cut(s) | 111 |
| Sau3AI | GATC | 2 cut(s) | 81, 121 |
| ScrFI | CCNGG | 1 cut(s) | 334 |
| SetI | ASST | 5 cut(s) | 24, 65, 92, 144, 239 |
| SfaNI | GCATC | 2 cut(s) | 122, 274 |
| SfcI | CTRYAG | 1 cut(s) | 288 |
| SmlI | CTYRAG | 2 cut(s) | 102, 147 |
| SmoI | CTYRAG | 2 cut(s) | 102, 147 |
| Sse9I | AATT | 4 cut(s) | 96, 253, 278, 349 |
| SseBI | AGGCCT | 1 cut(s) | 294 |
| StuI | AGGCCT | 1 cut(s) | 294 |
| StyD4I | CCNGG | 1 cut(s) | 332 |
| TaaI | ACNGT | 1 cut(s) | 289 |
| TaiI | ACGT | 2 cut(s) | 144, 239 |
| TaqI | TCGA | 3 cut(s) | 13, 156, 240 |
| TasI | AATT | 4 cut(s) | 96, 253, 278, 349 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| TseI | GCWGC | 1 cut(s) | 110 |
| TspDTI | ATGAA | 3 cut(s) | 16, 31, 58 |
| XapI | RAATTY | 1 cut(s) | 253 |
| XmiI | GTMKAC | 1 cut(s) | 186 |