Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 582 |
| AccB1I | GGYRCC | 1 cut(s) | 582 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 154 |
| AccI | GTMKAC | 1 cut(s) | 275 |
| AccII | CGCG | 1 cut(s) | 13 |
| AciI | CCGC | 4 cut(s) | 220, 289, 597, 627 |
| AdeI | CACNNNGTG | 1 cut(s) | 195 |
| AfaI | GTAC | 1 cut(s) | 584 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 154, 236, 260, 329 |
| AflIII | ACRYGT | 2 cut(s) | 11, 270 |
| AgsI | TTSAA | 1 cut(s) | 87 |
| AjnI | CCWGG | 1 cut(s) | 58 |
| AluBI | AGCT | 1 cut(s) | 389 |
| AluI | AGCT | 1 cut(s) | 389 |
| Alw26I | GTCTC | 2 cut(s) | 146, 518 |
| AoxI | GGCC | 3 cut(s) | 48, 62, 633 |
| ApaI | GGGCCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 2 cut(s) | 319, 623 |
| Asp718I | GGTACC | 1 cut(s) | 582 |
| AspS9I | GGNCC | 4 cut(s) | 48, 62, 63, 634 |
| AsuC2I | CCSGG | 1 cut(s) | 573 |
| AsuHPI | GGTGA | 2 cut(s) | 349, 434 |
| BaeGI | GKGCMC | 1 cut(s) | 66 |
| BanI | GGYRCC | 1 cut(s) | 582 |
| BanII | GRGCYC | 1 cut(s) | 66 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 393, 425 |
| BbvI | GCAGC | 2 cut(s) | 306, 635 |
| BceAI | ACGGC | 1 cut(s) | 179 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 213, 247, 282, 316 |
| BciT130I | CCWGG | 1 cut(s) | 60 |
| BcnI | CCSGG | 1 cut(s) | 573 |
| BcoDI | GTCTC | 2 cut(s) | 146, 518 |
| BfaI | CTAG | 5 cut(s) | 212, 258, 327, 489, 503 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 632 |
| BisI | GCNGC | 5 cut(s) | 221, 290, 320, 624, 627 |
| BlsI | GCNGC | 5 cut(s) | 222, 291, 321, 625, 628 |
| Bme1390I | CCNGG | 2 cut(s) | 60, 573 |
| BmgT120I | GGNCC | 4 cut(s) | 48, 62, 63, 634 |
| BmiI | GGNNCC | 2 cut(s) | 64, 584 |
| BmrFI | CCNGG | 2 cut(s) | 60, 573 |
| BmrI | ACTGGG | 1 cut(s) | 55 |
| BmsI | GCATC | 2 cut(s) | 396, 547 |
| BmuI | ACTGGG | 1 cut(s) | 55 |
| BpuEI | CTTGAG | 1 cut(s) | 637 |
| BpuMI | CCSGG | 1 cut(s) | 573 |
| BsaJI | CCNNGG | 2 cut(s) | 59, 572 |
| BsaWI | WCCGGW | 1 cut(s) | 366 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 154, 236, 260, 329 |
| Bse118I | RCCGGY | 2 cut(s) | 179, 631 |
| Bse1I | ACTGG | 2 cut(s) | 50, 471 |
| BseBI | CCWGG | 1 cut(s) | 60 |
| BseDI | CCNNGG | 2 cut(s) | 59, 572 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 154, 236, 260, 329 |
| BseNI | ACTGG | 2 cut(s) | 50, 471 |
| BseSI | GKGCMC | 1 cut(s) | 66 |
| BseXI | GCAGC | 2 cut(s) | 306, 635 |
| Bsh1236I | CGCG | 1 cut(s) | 13 |
| BshFI | GGCC | 3 cut(s) | 50, 64, 635 |
| BshNI | GGYRCC | 1 cut(s) | 582 |
| BsiSI | CCGG | 4 cut(s) | 180, 367, 572, 632 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 154, 236, 260, 329 |
| BsmAI | GTCTC | 2 cut(s) | 146, 518 |
| BsnI | GGCC | 3 cut(s) | 50, 64, 635 |
| Bsp120I | GGGCCC | 1 cut(s) | 62 |
| Bsp1286I | GDGCHC | 1 cut(s) | 66 |
| BspACI | CCGC | 4 cut(s) | 220, 289, 597, 627 |
| BspANI | GGCC | 3 cut(s) | 50, 64, 635 |
| BspFNI | CGCG | 1 cut(s) | 13 |
| BspLI | GGNNCC | 2 cut(s) | 64, 584 |
| BspT107I | GGYRCC | 1 cut(s) | 582 |
| BsrFI | RCCGGY | 2 cut(s) | 179, 631 |
| BsrI | ACTGG | 2 cut(s) | 50, 471 |
| BssAI | RCCGGY | 2 cut(s) | 179, 631 |
| BssECI | CCNNGG | 2 cut(s) | 59, 572 |
| Bst2UI | CCWGG | 1 cut(s) | 60 |
| Bst6I | CTCTTC | 1 cut(s) | 488 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 500 |
| BstDEI | CTNAG | 2 cut(s) | 281, 344 |
| BstFNI | CGCG | 1 cut(s) | 13 |
| BstMAI | GTCTC | 2 cut(s) | 146, 518 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 10, 206, 476, 485, 632 |
| BstNI | CCWGG | 1 cut(s) | 60 |
| BstSCI | CCNGG | 2 cut(s) | 58, 571 |
| BstSLI | GKGCMC | 1 cut(s) | 66 |
| BstUI | CGCG | 1 cut(s) | 13 |
| BstV1I | GCAGC | 2 cut(s) | 306, 635 |
| BsuRI | GGCC | 3 cut(s) | 50, 64, 635 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 500 |
| Cfr10I | RCCGGY | 2 cut(s) | 179, 631 |
| Cfr13I | GGNCC | 4 cut(s) | 48, 62, 63, 634 |
| Csp6I | GTAC | 1 cut(s) | 583 |
| CviAII | CATG | 2 cut(s) | 149, 587 |
| CviJI | RGCY | 7 cut(s) | 50, 64, 172, 389, 470, 626, 635 |
| CviKI_1 | RGCY | 7 cut(s) | 50, 64, 172, 389, 470, 626, 635 |
| CviQI | GTAC | 1 cut(s) | 583 |
| DdeI | CTNAG | 2 cut(s) | 281, 344 |
| DraIII | CACNNNGTG | 1 cut(s) | 195 |
| Eam1104I | CTCTTC | 1 cut(s) | 488 |
| EarI | CTCTTC | 1 cut(s) | 488 |
| Eco24I | GRGCYC | 1 cut(s) | 66 |
| EcoO109I | RGGNCCY | 1 cut(s) | 63 |
| EcoRII | CCWGG | 1 cut(s) | 58 |
| EcoT38I | GRGCYC | 1 cut(s) | 66 |
| FaeI | CATG | 2 cut(s) | 152, 590 |
| FaiI | YATR | 5 cut(s) | 150, 187, 378, 439, 588 |
| FatI | CATG | 2 cut(s) | 148, 586 |
| FblI | GTMKAC | 1 cut(s) | 275 |
| Fnu4HI | GCNGC | 5 cut(s) | 221, 290, 320, 624, 627 |
| FriOI | GRGCYC | 1 cut(s) | 66 |
| Fsp4HI | GCNGC | 5 cut(s) | 221, 290, 320, 624, 627 |
| FspBI | CTAG | 5 cut(s) | 212, 258, 327, 489, 503 |
| GluI | GCNGC | 5 cut(s) | 221, 290, 320, 624, 627 |
| HaeIII | GGCC | 3 cut(s) | 50, 64, 635 |
| HapII | CCGG | 4 cut(s) | 180, 367, 572, 632 |
| Hin1II | CATG | 2 cut(s) | 152, 590 |
| HinfI | GANTC | 1 cut(s) | 526 |
| HpaII | CCGG | 4 cut(s) | 180, 367, 572, 632 |
| HphI | GGTGA | 2 cut(s) | 349, 434 |
| Hpy166II | GTNNAC | 1 cut(s) | 276 |
| Hpy188I | TCNGA | 1 cut(s) | 356 |
| Hpy188III | TCNNGA | 2 cut(s) | 554, 611 |
| Hpy8I | GTNNAC | 1 cut(s) | 276 |
| HpyCH4IV | ACGT | 1 cut(s) | 270 |
| HpyCH4V | TGCA | 3 cut(s) | 8, 189, 234 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 10, 206, 476, 485, 632 |
| HpyF3I | CTNAG | 2 cut(s) | 281, 344 |
| HpySE526I | ACGT | 1 cut(s) | 270 |
| Hsp92II | CATG | 2 cut(s) | 152, 590 |
| KpnI | GGTACC | 1 cut(s) | 586 |
| Lsp1109I | GCAGC | 2 cut(s) | 306, 635 |
| LweI | GCATC | 2 cut(s) | 396, 547 |
| MaeI | CTAG | 5 cut(s) | 212, 258, 327, 489, 503 |
| MaeII | ACGT | 1 cut(s) | 270 |
| MaeIII | GTNAC | 2 cut(s) | 246, 440 |
| MboII | GAAGA | 2 cut(s) | 404, 475 |
| MfeI | CAATTG | 1 cut(s) | 448 |
| MhlI | GDGCHC | 1 cut(s) | 66 |
| MluCI | AATT | 1 cut(s) | 448 |
| MluI | ACGCGT | 1 cut(s) | 11 |
| MlyI | GAGTC | 1 cut(s) | 520 |
| MmeI | TCCRAC | 1 cut(s) | 76 |
| MnlI | CCTC | 4 cut(s) | 61, 264, 333, 612 |
| MseI | TTAA | 2 cut(s) | 606, 643 |
| MspI | CCGG | 4 cut(s) | 180, 367, 572, 632 |
| MspR9I | CCNGG | 2 cut(s) | 60, 573 |
| MunI | CAATTG | 1 cut(s) | 448 |
| MvaI | CCWGG | 1 cut(s) | 60 |
| MvnI | CGCG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 10, 206, 476, 485, 632 |
| NciI | CCSGG | 1 cut(s) | 573 |
| NlaIII | CATG | 2 cut(s) | 152, 590 |
| NlaIV | GGNNCC | 2 cut(s) | 64, 584 |
| NmuCI | GTSAC | 2 cut(s) | 246, 440 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 154 |
| PkrI | GCNGC | 5 cut(s) | 222, 291, 321, 625, 628 |
| PleI | GAGTC | 1 cut(s) | 520 |
| PpsI | GAGTC | 1 cut(s) | 520 |
| Psp6I | CCWGG | 1 cut(s) | 58 |
| PspGI | CCWGG | 1 cut(s) | 58 |
| PspN4I | GGNNCC | 2 cut(s) | 64, 584 |
| PspOMI | GGGCCC | 1 cut(s) | 62 |
| PspPI | GGNCC | 4 cut(s) | 48, 62, 63, 634 |
| RsaI | GTAC | 1 cut(s) | 584 |
| RsaNI | GTAC | 1 cut(s) | 583 |
| SaqAI | TTAA | 2 cut(s) | 606, 643 |
| SatI | GCNGC | 5 cut(s) | 221, 290, 320, 624, 627 |
| Sau96I | GGNCC | 4 cut(s) | 48, 62, 63, 634 |
| SchI | GAGTC | 1 cut(s) | 520 |
| ScrFI | CCNGG | 2 cut(s) | 60, 573 |
| SduI | GDGCHC | 1 cut(s) | 66 |
| SetI | ASST | 6 cut(s) | 194, 217, 256, 273, 391, 584 |
| SfaNI | GCATC | 2 cut(s) | 396, 547 |
| SmlI | CTYRAG | 1 cut(s) | 616 |
| SmoI | CTYRAG | 1 cut(s) | 616 |
| Sse9I | AATT | 1 cut(s) | 448 |
| SsiI | CCGC | 4 cut(s) | 220, 289, 597, 627 |
| SspMI | CTAG | 5 cut(s) | 212, 258, 327, 489, 503 |
| StyD4I | CCNGG | 2 cut(s) | 58, 571 |
| TaiI | ACGT | 1 cut(s) | 273 |
| TasI | AATT | 1 cut(s) | 448 |
| TauI | GCSGC | 3 cut(s) | 223, 292, 629 |
| Tru1I | TTAA | 2 cut(s) | 606, 643 |
| Tru9I | TTAA | 2 cut(s) | 606, 643 |
| TseFI | GTSAC | 2 cut(s) | 246, 440 |
| TseI | GCWGC | 2 cut(s) | 319, 623 |
| Tsp45I | GTSAC | 2 cut(s) | 246, 440 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 154 |
| XmiI | GTMKAC | 1 cut(s) | 275 |
| XspI | CTAG | 5 cut(s) | 212, 258, 327, 489, 503 |