Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 393 |
| AclWI | GGATC | 1 cut(s) | 535 |
| AfaI | GTAC | 2 cut(s) | 78, 211 |
| AfeI | AGCGCT | 1 cut(s) | 274 |
| AgsI | TTSAA | 4 cut(s) | 69, 250, 366, 469 |
| AjnI | CCWGG | 1 cut(s) | 445 |
| AluBI | AGCT | 6 cut(s) | 57, 305, 385, 397, 425, 435 |
| AluI | AGCT | 6 cut(s) | 57, 305, 385, 397, 425, 435 |
| Alw21I | GWGCWC | 1 cut(s) | 59 |
| AlwI | GGATC | 1 cut(s) | 535 |
| Ama87I | CYCGRG | 1 cut(s) | 219 |
| Aor51HI | AGCGCT | 1 cut(s) | 274 |
| ApeKI | GCWGC | 6 cut(s) | 267, 270, 292, 319, 322, 346 |
| AspLEI | GCGC | 1 cut(s) | 275 |
| AsuHPI | GGTGA | 1 cut(s) | 236 |
| AvaI | CYCGRG | 1 cut(s) | 219 |
| BanII | GRGCYC | 1 cut(s) | 59 |
| Bbv12I | GWGCWC | 1 cut(s) | 59 |
| BbvI | GCAGC | 6 cut(s) | 279, 282, 304, 331, 334, 358 |
| BccI | CCATC | 1 cut(s) | 436 |
| BciT130I | CCWGG | 1 cut(s) | 447 |
| BfaI | CTAG | 3 cut(s) | 72, 132, 161 |
| BfmI | CTRYAG | 1 cut(s) | 420 |
| BfoI | RGCGCY | 1 cut(s) | 276 |
| BisI | GCNGC | 6 cut(s) | 268, 271, 293, 320, 323, 347 |
| BlsI | GCNGC | 6 cut(s) | 269, 272, 294, 321, 324, 348 |
| Bme1390I | CCNGG | 1 cut(s) | 447 |
| BmeT110I | CYCGRG | 1 cut(s) | 219 |
| BmiI | GGNNCC | 1 cut(s) | 171 |
| BmrFI | CCNGG | 1 cut(s) | 447 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 26, 409, 439 |
| BseBI | CCWGG | 1 cut(s) | 447 |
| BseRI | GAGGAG | 1 cut(s) | 179 |
| BseXI | GCAGC | 6 cut(s) | 279, 282, 304, 331, 334, 358 |
| BseYI | CCCAGC | 1 cut(s) | 381 |
| BsgI | GTGCAG | 1 cut(s) | 365 |
| BsiHKAI | GWGCWC | 1 cut(s) | 59 |
| BsiHKCI | CYCGRG | 1 cut(s) | 219 |
| BslFI | GGGAC | 1 cut(s) | 364 |
| BsmFI | GGGAC | 1 cut(s) | 364 |
| BsoBI | CYCGRG | 1 cut(s) | 219 |
| Bsp1286I | GDGCHC | 1 cut(s) | 59 |
| Bsp143I | GATC | 1 cut(s) | 527 |
| BspHI | TCATGA | 1 cut(s) | 255 |
| BspLI | GGNNCC | 1 cut(s) | 171 |
| BspPI | GGATC | 1 cut(s) | 535 |
| BssMI | GATC | 1 cut(s) | 527 |
| Bst2UI | CCWGG | 1 cut(s) | 447 |
| Bst4CI | ACNGT | 2 cut(s) | 81, 370 |
| BstC8I | GCNNGC | 2 cut(s) | 387, 477 |
| BstDEI | CTNAG | 2 cut(s) | 398, 531 |
| BstH2I | RGCGCY | 1 cut(s) | 276 |
| BstHHI | GCGC | 1 cut(s) | 275 |
| BstKTI | GATC | 1 cut(s) | 530 |
| BstMBI | GATC | 1 cut(s) | 527 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 292, 403 |
| BstNI | CCWGG | 1 cut(s) | 447 |
| BstSCI | CCNGG | 1 cut(s) | 445 |
| BstSFI | CTRYAG | 1 cut(s) | 420 |
| BstV1I | GCAGC | 6 cut(s) | 279, 282, 304, 331, 334, 358 |
| BstX2I | RGATCY | 1 cut(s) | 527 |
| BstYI | RGATCY | 1 cut(s) | 527 |
| Cac8I | GCNNGC | 2 cut(s) | 387, 477 |
| CciI | TCATGA | 1 cut(s) | 255 |
| CfoI | GCGC | 1 cut(s) | 275 |
| CseI | GACGC | 1 cut(s) | 197 |
| CsiI | ACCWGGT | 1 cut(s) | 445 |
| Csp6I | GTAC | 2 cut(s) | 77, 210 |
| CviAII | CATG | 1 cut(s) | 256 |
| CviQI | GTAC | 2 cut(s) | 77, 210 |
| DdeI | CTNAG | 2 cut(s) | 398, 531 |
| DpnI | GATC | 1 cut(s) | 529 |
| DpnII | GATC | 1 cut(s) | 527 |
| Ecl136II | GAGCTC | 1 cut(s) | 57 |
| Eco24I | GRGCYC | 1 cut(s) | 59 |
| Eco47III | AGCGCT | 1 cut(s) | 274 |
| Eco53kI | GAGCTC | 1 cut(s) | 57 |
| Eco88I | CYCGRG | 1 cut(s) | 219 |
| EcoICRI | GAGCTC | 1 cut(s) | 57 |
| EcoRII | CCWGG | 1 cut(s) | 445 |
| EcoT38I | GRGCYC | 1 cut(s) | 59 |
| FaeI | CATG | 1 cut(s) | 259 |
| FaiI | YATR | 9 cut(s) | 27, 51, 53, 114, 198, 236, 257, 393, 483 |
| FaqI | GGGAC | 1 cut(s) | 364 |
| FatI | CATG | 1 cut(s) | 255 |
| Fnu4HI | GCNGC | 6 cut(s) | 268, 271, 293, 320, 323, 347 |
| FriOI | GRGCYC | 1 cut(s) | 59 |
| Fsp4HI | GCNGC | 6 cut(s) | 268, 271, 293, 320, 323, 347 |
| FspBI | CTAG | 3 cut(s) | 72, 132, 161 |
| GlaI | GCGC | 1 cut(s) | 274 |
| GluI | GCNGC | 6 cut(s) | 268, 271, 293, 320, 323, 347 |
| GsaI | CCCAGC | 1 cut(s) | 385 |
| HaeII | RGCGCY | 1 cut(s) | 276 |
| HgaI | GACGC | 1 cut(s) | 197 |
| HhaI | GCGC | 1 cut(s) | 275 |
| Hin1II | CATG | 1 cut(s) | 259 |
| Hin6I | GCGC | 1 cut(s) | 273 |
| HinP1I | GCGC | 1 cut(s) | 273 |
| HinfI | GANTC | 2 cut(s) | 203, 377 |
| HphI | GGTGA | 1 cut(s) | 236 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 339 |
| Hpy188III | TCNNGA | 5 cut(s) | 92, 185, 256, 299, 441 |
| HpyAV | CCTTC | 2 cut(s) | 244, 456 |
| HpyCH4III | ACNGT | 2 cut(s) | 81, 370 |
| HpyCH4V | TGCA | 5 cut(s) | 42, 110, 286, 346, 373 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 292, 403 |
| HpyF3I | CTNAG | 2 cut(s) | 398, 531 |
| Hsp92II | CATG | 1 cut(s) | 259 |
| HspAI | GCGC | 1 cut(s) | 273 |
| Kzo9I | GATC | 1 cut(s) | 527 |
| LmnI | GCTCC | 2 cut(s) | 175, 430 |
| Lsp1109I | GCAGC | 6 cut(s) | 279, 282, 304, 331, 334, 358 |
| LweI | GCATC | 1 cut(s) | 304 |
| MabI | ACCWGGT | 1 cut(s) | 445 |
| MaeI | CTAG | 3 cut(s) | 72, 132, 161 |
| MalI | GATC | 1 cut(s) | 529 |
| MboI | GATC | 1 cut(s) | 527 |
| MboII | GAAGA | 3 cut(s) | 239, 351, 354 |
| MflI | RGATCY | 1 cut(s) | 527 |
| MhlI | GDGCHC | 1 cut(s) | 59 |
| MlyI | GAGTC | 1 cut(s) | 386 |
| MnlI | CCTC | 7 cut(s) | 28, 157, 160, 193, 215, 253, 519 |
| MslI | CAYNNNNRTG | 1 cut(s) | 339 |
| MspR9I | CCNGG | 1 cut(s) | 447 |
| MvaI | CCWGG | 1 cut(s) | 447 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 292, 403 |
| NdeII | GATC | 1 cut(s) | 527 |
| NlaIII | CATG | 1 cut(s) | 259 |
| NlaIV | GGNNCC | 1 cut(s) | 171 |
| PaeR7I | CTCGAG | 1 cut(s) | 219 |
| PagI | TCATGA | 1 cut(s) | 255 |
| PfeI | GAWTC | 1 cut(s) | 203 |
| PflFI | GACNNNGTC | 1 cut(s) | 311 |
| PkrI | GCNGC | 6 cut(s) | 269, 272, 294, 321, 324, 348 |
| PleI | GAGTC | 1 cut(s) | 385 |
| PpsI | GAGTC | 1 cut(s) | 385 |
| PsiI | TTATAA | 1 cut(s) | 393 |
| Psp124BI | GAGCTC | 1 cut(s) | 59 |
| Psp6I | CCWGG | 1 cut(s) | 445 |
| PspFI | CCCAGC | 1 cut(s) | 381 |
| PspGI | CCWGG | 1 cut(s) | 445 |
| PspN4I | GGNNCC | 1 cut(s) | 171 |
| PspXI | VCTCGAGB | 1 cut(s) | 219 |
| PsuI | RGATCY | 1 cut(s) | 527 |
| PsyI | GACNNNGTC | 1 cut(s) | 311 |
| RsaI | GTAC | 2 cut(s) | 78, 211 |
| RsaNI | GTAC | 2 cut(s) | 77, 210 |
| RseI | CAYNNNNRTG | 1 cut(s) | 339 |
| SacI | GAGCTC | 1 cut(s) | 59 |
| SatI | GCNGC | 6 cut(s) | 268, 271, 293, 320, 323, 347 |
| Sau3AI | GATC | 1 cut(s) | 527 |
| SchI | GAGTC | 1 cut(s) | 386 |
| ScrFI | CCNGG | 1 cut(s) | 447 |
| SduI | GDGCHC | 1 cut(s) | 59 |
| SexAI | ACCWGGT | 1 cut(s) | 445 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SfcI | CTRYAG | 1 cut(s) | 420 |
| Sfr274I | CTCGAG | 1 cut(s) | 219 |
| SlaI | CTCGAG | 1 cut(s) | 219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 339 |
| SmlI | CTYRAG | 1 cut(s) | 219 |
| SmoI | CTYRAG | 1 cut(s) | 219 |
| SspMI | CTAG | 3 cut(s) | 72, 132, 161 |
| SstI | GAGCTC | 1 cut(s) | 59 |
| StyD4I | CCNGG | 1 cut(s) | 445 |
| TaaI | ACNGT | 2 cut(s) | 81, 370 |
| TaqI | TCGA | 1 cut(s) | 220 |
| TatI | WGTACW | 2 cut(s) | 76, 209 |
| TfiI | GAWTC | 1 cut(s) | 203 |
| TseI | GCWGC | 6 cut(s) | 267, 270, 292, 319, 322, 346 |
| TspDTI | ATGAA | 1 cut(s) | 345 |
| Tth111I | GACNNNGTC | 1 cut(s) | 311 |
| XhoI | CTCGAG | 1 cut(s) | 219 |
| XspI | CTAG | 3 cut(s) | 72, 132, 161 |